MGE detailed information
MGE type: Prophage MGE length: 45657 bp
Accession: NZ_CP015229 Location: 1661724..1707380 Organism: Escherichia coli strain 06-00048 Replicon: chromosome
Accession: NZ_CP015229 Location: 1661724..1707380 Organism: Escherichia coli strain 06-00048 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJ11_RS09950 () | 1657776..1658759 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| GJ11_RS09955 () | 1659237..1660610 | + | 1374 | WP_065226721.1 | ATP-dependent RNA helicase DbpA | - |
| GJ11_RS09960 () | 1660737..1661672 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| GJ11_RS09965 () | 1661724..1662959 | - | 1236 | WP_000040852.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GJ11_RS09970 () | 1662961..1663176 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| GJ11_RS09975 () | 1663276..1663464 | - | 189 | WP_001307770.1 | DUF1187 family protein | - |
| - () | 1663280..1663458 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1663280..1663458 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1663280..1663458 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1663280..1663458 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| GJ11_RS09980 () | 1663457..1663651 | - | 195 | WP_001307771.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| GJ11_RS09985 () | 1663684..1664364 | - | 681 | WP_021572575.1 | YqaJ viral recombinase family protein | - |
| GJ11_RS09990 () | 1664361..1665140 | - | 780 | WP_047671032.1 | phage recombination protein Bet | - |
| GJ11_RS09995 () | 1665146..1665442 | - | 297 | WP_000102059.1 | host-nuclease inhibitor protein Gam | - |
| GJ11_RS10000 () | 1665420..1667443 | - | 2024 | Protein_1572 | hypothetical protein | - |
| GJ11_RS10005 () | 1667542..1667816 | - | 275 | Protein_1573 | hypothetical protein | - |
| GJ11_RS10010 () | 1667891..1668061 | - | 171 | WP_077816938.1 | hypothetical protein | - |
| GJ11_RS10015 () | 1668061..1668282 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| GJ11_RS10020 () | 1668676..1668909 | + | 234 | WP_065226722.1 | hypothetical protein | - |
| GJ11_RS10025 () | 1668871..1669176 | - | 306 | WP_065226723.1 | hypothetical protein | - |
| GJ11_RS10030 () | 1669428..1669889 | - | 462 | WP_000753628.1 | helix-turn-helix domain-containing protein | - |
| GJ11_RS10035 () | 1669997..1670272 | + | 276 | WP_001053423.1 | helix-turn-helix domain-containing protein | - |
| GJ11_RS10040 () | 1670256..1670678 | + | 423 | WP_000702028.1 | hypothetical protein | - |
| GJ11_RS10045 () | 1670698..1671111 | + | 414 | WP_000695003.1 | hypothetical protein | - |
| GJ11_RS10050 () | 1671621..1672529 | + | 909 | WP_065228220.1 | hypothetical protein | - |
| GJ11_RS10055 () | 1672441..1672983 | + | 543 | WP_157840688.1 | replication protein | - |
| GJ11_RS10060 () | 1673018..1673788 | + | 771 | WP_065226724.1 | DUF1627 domain-containing protein | - |
| GJ11_RS10065 () | 1673804..1674220 | + | 417 | WP_001563197.1 | DUF977 family protein | - |
| GJ11_RS10070 () | 1674217..1674705 | + | 489 | WP_001563198.1 | class I SAM-dependent methyltransferase | - |
| GJ11_RS10075 () | 1674698..1674952 | + | 255 | WP_001563199.1 | hypothetical protein | - |
| GJ11_RS10080 () | 1674945..1675256 | + | 312 | WP_047671132.1 | hypothetical protein | - |
| GJ11_RS10085 () | 1675257..1675562 | + | 306 | WP_001217588.1 | hypothetical protein | - |
| GJ11_RS10090 () | 1675658..1676491 | + | 834 | WP_047671131.1 | hypothetical protein | - |
| GJ11_RS10095 () | 1676601..1676705 | + | 105 | WP_001278459.1 | hypothetical protein | - |
| GJ11_RS10100 () | 1676949..1677104 | + | 156 | WP_047671129.1 | type I toxin-antitoxin system toxin HokD | - |
| GJ11_RS10105 () | 1677355..1677528 | + | 174 | WP_047671128.1 | hypothetical protein | - |
| GJ11_RS10110 () | 1677588..1678187 | + | 600 | WP_047671127.1 | DUF1367 family protein | - |
| GJ11_RS10115 () | 1678187..1678477 | + | 291 | WP_047671126.1 | DUF1364 domain-containing protein | - |
| GJ11_RS10120 () | 1678474..1679016 | + | 543 | WP_047671125.1 | DUF1133 family protein | - |
| GJ11_RS10125 () | 1679404..1680129 | + | 726 | WP_077783273.1 | hypothetical protein | VF |
| GJ11_RS10130 () | 1680197..1680622 | + | 426 | WP_047671124.1 | subtilase cytotoxin subunit B-like protein | - |
| GJ11_RS10135 () | 1680680..1681072 | + | 393 | WP_001294583.1 | holin | - |
| GJ11_RS10140 () | 1681062..1681337 | + | 276 | WP_000950565.1 | phage holin family protein | - |
| GJ11_RS10145 () | 1681340..1681717 | + | 378 | WP_047671123.1 | M15 family metallopeptidase | - |
| GJ11_RS10150 () | 1681788..1682069 | + | 282 | WP_047671122.1 | hypothetical protein | - |
| GJ11_RS10155 () | 1682504..1682710 | + | 207 | WP_001208684.1 | Rz1 family lipoprotein | - |
| GJ11_RS10160 () | 1683207..1683683 | + | 477 | WP_000348567.1 | DUF1441 family protein | - |
| GJ11_RS10165 () | 1683680..1685803 | + | 2124 | Protein_1605 | phage terminase large subunit family protein | - |
| GJ11_RS10170 () | 1685800..1686012 | + | 213 | WP_000102415.1 | hypothetical protein | - |
| GJ11_RS10175 () | 1686012..1687514 | + | 1503 | WP_065226726.1 | phage portal protein | - |
| GJ11_RS10180 () | 1687504..1689483 | + | 1980 | WP_135564167.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| GJ11_RS10185 () | 1689571..1689897 | + | 327 | WP_065226727.1 | DUF2190 family protein | - |
| GJ11_RS10190 () | 1689890..1690171 | + | 282 | WP_065226728.1 | DNA breaking-rejoining protein | - |
| GJ11_RS10195 () | 1690174..1690800 | + | 627 | WP_065226729.1 | phage tail protein | - |
| GJ11_RS10200 () | 1690810..1691208 | + | 399 | WP_065226730.1 | phage tail protein | - |
| GJ11_RS10205 () | 1691216..1691965 | + | 750 | WP_047088887.1 | phage tail protein | - |
| GJ11_RS10210 () | 1691981..1692412 | + | 432 | WP_042965925.1 | phage minor tail protein G | - |
| GJ11_RS10215 () | 1692439..1692843 | + | 405 | WP_065226731.1 | phage tail assembly protein T | - |
| GJ11_RS10220 () | 1692833..1695445 | + | 2613 | WP_065226732.1 | phage tail tape measure protein | - |
| GJ11_RS10225 () | 1695442..1695771 | + | 330 | WP_000847333.1 | phage tail protein | - |
| GJ11_RS10230 () | 1695771..1696469 | + | 699 | WP_001152536.1 | phage minor tail protein L | - |
| GJ11_RS10235 () | 1696543..1697298 | - | 756 | WP_065226733.1 | IS21 family transposase ISEc10 | Transposase |
| GJ11_RS10240 () | 1697295..1698794 | - | 1500 | WP_065225932.1 | IS21 family transposase ISEc10 | Transposase |
| GJ11_RS10245 () | 1698891..1699634 | + | 744 | WP_065226734.1 | C40 family peptidase | - |
| GJ11_RS10250 () | 1699571..1700203 | + | 633 | WP_071533105.1 | tail assembly protein | - |
| GJ11_RS10255 () | 1700264..1703965 | + | 3702 | WP_065226735.1 | DUF1983 domain-containing protein | - |
| GJ11_RS10260 () | 1704032..1704631 | + | 600 | WP_001230293.1 | hypothetical protein | VF |
| GJ11_RS10265 () | 1704697..1706787 | + | 2091 | WP_065226736.1 | prophage tail fiber N-terminal domain-containing protein | - |
| GJ11_RS10270 () | 1706802..1707380 | + | 579 | WP_047671102.1 | DUF4376 domain-containing protein | - |
| GJ11_RS10275 () | 1707840..1708274 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| GJ11_RS10280 () | 1708415..1709548 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|