MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 152978 bp
Accession: NZ_CP015212 Location: 1..152978 Organism: Cereibacter sphaeroides strain MBTLJ-13 Replicon: plasmid a
Accession: NZ_CP015212 Location: 1..152978 Organism: Cereibacter sphaeroides strain MBTLJ-13 Replicon: plasmid a
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A3858_RS23535 () | 173..622 | + | 450 | WP_196772436.1 | conjugal transfer protein TraN | - |
| A3858_RS23540 () | 624..1058 | + | 435 | WP_196772435.1 | conjugal transfer protein TraN | - |
| A3858_RS19460 () | 1055..1453 | + | 399 | WP_011331485.1 | conjugal transfer protein TraF | - |
| A3858_RS19465 () | 1446..2279 | + | 834 | WP_011331486.1 | conjugal transfer protein TraF | - |
| A3858_RS19470 () | 2287..2532 | + | 246 | WP_011331487.1 | hypothetical protein | - |
| A3858_RS19475 () | 2552..3940 | + | 1389 | WP_065462929.1 | conjugal transfer protein TraH | - |
| A3858_RS19480 () | 3944..7365 | + | 3422 | Protein_6 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| A3858_RS19485 () | 7795..8073 | - | 279 | WP_017140568.1 | hypothetical protein | - |
| A3858_RS22750 () | 8036..8326 | - | 291 | WP_011836217.1 | BrnT family toxin | - |
| A3858_RS19490 () | 8494..9042 | - | 549 | WP_017140567.1 | IS110 family transposase ISMav6 | Transposase |
| A3858_RS22755 () | 10047..10189 | - | 143 | Protein_10 | IS3 family transposase ISAfe5 | Transposase |
| A3858_RS19500 () | 10369..11571 | - | 1203 | WP_011836218.1 | restriction endonuclease | - |
| A3858_RS22760 () | 12105..12278 | - | 174 | WP_080588245.1 | hypothetical protein | - |
| A3858_RS19505 () | 12275..12613 | - | 339 | WP_017140564.1 | hypothetical protein | - |
| A3858_RS19510 () | 12613..13014 | - | 402 | WP_011836220.1 | hypothetical protein | - |
| A3858_RS19515 () | 13007..13564 | - | 558 | WP_011836221.1 | DUF2726 domain-containing protein | - |
| A3858_RS19520 () | 13566..14057 | - | 492 | WP_011836222.1 | hypothetical protein | - |
| A3858_RS19525 () | 14097..14918 | - | 822 | WP_011836223.1 | DsbA family protein | - |
| A3858_RS19530 () | 15078..17360 | + | 2283 | WP_011836224.1 | type IV secretion system DNA-binding domain-containing protein | - |
| A3858_RS19535 () | 17360..20692 | + | 3333 | WP_160384266.1 | Multifunctional conjugation protein TraI | Relaxase |
| A3858_RS19540 () | 20689..21321 | + | 633 | WP_011836226.1 | hypothetical protein | - |
| A3858_RS19545 () | 21494..22330 | + | 837 | WP_061350899.1 | hypothetical protein | - |
| A3858_RS19550 () | 22800..23648 | + | 849 | WP_017140561.1 | Protein virC1 | VF |
| A3858_RS23545 () | 23900..24205 | + | 306 | WP_017140560.1 | hypothetical protein | - |
| A3858_RS19560 () | 26075..26938 | - | 864 | WP_011836229.1 | DUF945 domain-containing protein | - |
| A3858_RS23330 () | 28007..28165 | + | 159 | WP_017140559.1 | hypothetical protein | - |
| A3858_RS19565 () | 28235..28501 | - | 267 | WP_017208432.1 | hypothetical protein | - |
| A3858_RS19570 () | 29018..29566 | - | 549 | WP_017140556.1 | hypothetical protein | - |
| A3858_RS19575 () | 29907..31125 | - | 1219 | Protein_28 | transposase | - |
| A3858_RS23550 () | 31577..31897 | + | 321 | WP_017140547.1 | hypothetical protein | - |
| A3858_RS19585 () | 32688..33014 | + | 327 | WP_017140546.1 | hypothetical protein | - |
| A3858_RS19590 () | 33143..33493 | + | 351 | WP_011331471.1 | hypothetical protein | - |
| A3858_RS19595 () | 33560..33850 | + | 291 | WP_011331472.1 | type IV conjugative transfer system protein TraL | - |
| A3858_RS19600 () | 33838..34404 | + | 567 | WP_017140545.1 | type IV conjugative transfer system protein TraE | - |
| A3858_RS19605 () | 34401..35120 | + | 720 | WP_011331474.1 | type-F conjugative transfer system secretin TraK | - |
| A3858_RS19610 () | 35120..36373 | + | 1254 | WP_011331475.1 | TraB/VirB10 family protein | - |
| A3858_RS19615 () | 36370..36798 | + | 429 | WP_011331476.1 | TraV family lipoprotein | - |
| A3858_RS19620 () | 36795..39279 | + | 2485 | Protein_37 | TraC family protein | - |
| A3858_RS19625 () | 39276..39593 | + | 318 | WP_011331478.1 | hypothetical protein | - |
| A3858_RS19630 () | 39571..39930 | + | 360 | WP_011331479.1 | TrbI F-type domain-containing protein | - |
| A3858_RS19635 () | 39927..40457 | + | 531 | WP_011331480.1 | S26 family signal peptidase | - |
| A3858_RS19640 () | 40433..41071 | + | 639 | WP_011331481.1 | hypothetical protein | - |
| A3858_RS19645 () | 41068..42054 | + | 987 | WP_011331482.1 | TraU family protein | - |
| A3858_RS19650 () | 42015..42767 | + | 753 | WP_011331483.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| A3858_RS19655 () | 42764..44872 | + | 2109 | WP_011331484.1 | conjugal transfer protein TraN | - |
| A3858_RS19660 () | 44838..45272 | + | 435 | WP_017140544.1 | conjugal transfer protein TraF | - |
| A3858_RS19665 () | 45265..46098 | + | 834 | WP_011331486.1 | conjugal transfer protein TraF | - |
| A3858_RS19670 () | 46106..46351 | + | 246 | WP_011331487.1 | hypothetical protein | - |
| A3858_RS19675 () | 46371..47759 | + | 1389 | WP_017140543.1 | conjugal transfer protein TraH | - |
| A3858_RS19680 () | 47763..51173 | + | 3411 | WP_011331489.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| A3858_RS23335 () | 51181..51513 | - | 333 | WP_147176093.1 | hypothetical protein | - |
| A3858_RS22775 () | 52014..52436 | + | 423 | WP_160384180.1 | GNAT family N-acetyltransferase | - |
| A3858_RS22780 () | 52499..52969 | + | 471 | WP_023003467.1 | hypothetical protein | - |
| A3858_RS19685 () | 52995..57629 | + | 4635 | WP_011331491.1 | Bifunctional hemolysin/adenylate cyclase | VF |
| A3858_RS19690 () | 57814..58098 | - | 285 | WP_023003468.1 | helix-turn-helix domain-containing protein | - |
| A3858_RS19695 () | 58064..58336 | - | 273 | WP_002724939.1 | BrnT family toxin | - |
| A3858_RS23340 () | 58515..58946 | + | 432 | WP_147176042.1 | hypothetical protein | - |
| A3858_RS19700 () | 59203..59988 | - | 786 | WP_011331492.1 | ImmA/IrrE family metallo-endopeptidase | - |
| A3858_RS19705 () | 59988..60347 | - | 360 | WP_017208431.1 | hypothetical protein | - |
| A3858_RS19710 () | 60413..61003 | - | 591 | WP_017140550.1 | hypothetical protein | - |
| A3858_RS19715 () | 61135..61413 | + | 279 | WP_011331494.1 | hypothetical protein | - |
| A3858_RS19720 () | 61518..62759 | + | 1242 | WP_011331495.1 | nucleotidyltransferase | - |
| A3858_RS19725 () | 62756..63238 | + | 483 | WP_011331496.1 | hypothetical protein | - |
| A3858_RS19730 () | 63219..64409 | + | 1191 | WP_011331497.1 | SAVED domain-containing protein | - |
| A3858_RS22785 () | 64632..64805 | - | 174 | WP_017140549.1 | hypothetical protein | - |
| A3858_RS19735 () | 65146..65703 | - | 558 | WP_011836221.1 | DUF2726 domain-containing protein | - |
| A3858_RS19740 () | 65705..66196 | - | 492 | WP_011836222.1 | hypothetical protein | - |
| A3858_RS19745 () | 66334..67710 | + | 1377 | WP_011339201.1 | ISNCY family transposase ISRel26 | Transposase |
| A3858_RS19750 () | 67841..68668 | - | 828 | WP_017208421.1 | DsbA family protein | - |
| A3858_RS19755 () | 68828..71110 | + | 2283 | WP_011836224.1 | type IV secretion system DNA-binding domain-containing protein | - |
| A3858_RS19760 () | 71110..74442 | + | 3333 | WP_162129773.1 | Multifunctional conjugation protein TraI | Relaxase |
| A3858_RS19765 () | 74439..75071 | + | 633 | WP_011836226.1 | hypothetical protein | - |
| A3858_RS19770 () | 75244..76080 | + | 837 | WP_017140540.1 | hypothetical protein | - |
| A3858_RS23345 () | 76135..76932 | - | 798 | WP_155731657.1 | hypothetical protein | - |
| A3858_RS19775 () | 78235..78960 | + | 726 | WP_011331416.1 | Chromosome partitioning protein ParA | VF |
| A3858_RS22795 () | 78957..79583 | + | 627 | WP_020477363.1 | hypothetical protein | - |
| A3858_RS19780 () | 79647..79898 | - | 252 | WP_017140537.1 | hypothetical protein | - |
| A3858_RS19785 () | 80053..80250 | + | 198 | WP_017140536.1 | hypothetical protein | - |
| A3858_RS19790 () | 80296..80487 | - | 192 | WP_017140535.1 | hypothetical protein | - |
| A3858_RS23355 () | 81544..81702 | + | 159 | WP_023003456.1 | hypothetical protein | - |
| A3858_RS19800 () | 82279..82950 | + | 672 | WP_011331417.1 | SOS response-associated peptidase | - |
| A3858_RS19805 () | 83013..83225 | + | 213 | WP_017140533.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| A3858_RS19810 () | 83225..83638 | + | 414 | WP_011331418.1 | type II toxin-antitoxin system VapC family toxin | - |
| A3858_RS19820 () | 84231..84584 | - | 354 | WP_017140531.1 | hypothetical protein | - |
| A3858_RS19825 () | 84581..85978 | - | 1398 | WP_017140530.1 | DUF4942 domain-containing protein | - |
| A3858_RS19830 () | 86077..86472 | - | 396 | WP_011331421.1 | DUF3768 domain-containing protein | - |
| A3858_RS22805 () | 86973..87455 | + | 483 | WP_160384187.1 | plasmid pRiA4b ORF-3 family protein | - |
| A3858_RS19840 () | 87498..87839 | + | 342 | Protein_87 | IS66 family transposase ISRel24 | Transposase |
| A3858_RS19845 () | 87922..88572 | - | 651 | WP_011331424.1 | LysE family translocator | - |
| A3858_RS19850 () | 88579..89670 | - | 1092 | WP_011331425.1 | DUF2332 domain-containing protein | - |
| A3858_RS23360 () | 89889..90020 | - | 132 | Protein_90 | IS3 family transposase | - |
| A3858_RS23555 () | 90077..90905 | - | 829 | Protein_91 | IS66 family transposase ISApr6 | Transposase |
| A3858_RS19860 () | 90954..91244 | - | 291 | WP_011331427.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| A3858_RS19865 () | 91586..92656 | + | 1071 | WP_011331428.1 | radical SAM protein | - |
| A3858_RS19870 () | 92790..93717 | + | 928 | Protein_94 | methyltransferase domain-containing protein | - |
| A3858_RS19875 () | 93792..94802 | + | 1011 | WP_011331430.1 | isopropylmalate/homocitrate synthase | - |
| A3858_RS19880 () | 94877..95245 | + | 369 | WP_011331431.1 | hypothetical protein | - |
| A3858_RS19885 () | 95238..96560 | + | 1323 | WP_011331432.1 | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | - |
| A3858_RS19890 () | 96569..97372 | + | 804 | WP_017140525.1 | hypothetical protein | - |
| A3858_RS19895 () | 97573..99144 | + | 1572 | WP_017140524.1 | asparagine synthase | - |
| A3858_RS22815 () | 99207..99338 | + | 132 | Protein_100 | IS3 family transposase ISRde3 | Transposase |
| A3858_RS19900 () | 99406..100977 | - | 1572 | WP_011331435.1 | IS66 family transposase ISRhsp5 | Transposase |
| A3858_RS19905 () | 101046..101399 | - | 354 | WP_011331436.1 | IS66 family transposase ISRhsp5 | Transposase |
| A3858_RS19910 () | 101396..101695 | - | 300 | WP_017208427.1 | IS66 family transposase ISRhsp5 | Transposase |
| A3858_RS19915 () | 102061..102354 | - | 294 | Protein_104 | IS66 family transposase ISXau4 | Transposase |
| A3858_RS22825 () | 102366..102539 | - | 174 | Protein_105 | transposase | - |
| A3858_RS22830 () | 102625..102834 | + | 210 | Protein_106 | transposase | - |
| A3858_RS19920 () | 103203..104030 | + | 828 | WP_011331438.1 | hypothetical protein | - |
| A3858_RS19925 () | 104073..104450 | - | 378 | WP_011331439.1 | hypothetical protein | - |
| A3858_RS19930 () | 104450..104878 | - | 429 | WP_023003461.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| A3858_RS23560 () | 105833..106243 | + | 411 | WP_017140520.1 | hypothetical protein | - |
| A3858_RS19950 () | 106771..107176 | + | 406 | Protein_111 | transposase | - |
| A3858_RS19955 () | 107296..107478 | + | 183 | WP_017140518.1 | IS66 family transposase IS866 | Transposase |
| A3858_RS22845 () | 107590..109163 | + | 1574 | Protein_113 | IS66 family transposase ISPpa7 | Transposase |
| A3858_RS22850 () | 109683..110894 | - | 1212 | WP_011331443.1 | replication initiation protein RepC | - |
| A3858_RS19975 () | 111077..112063 | - | 987 | WP_011331444.1 | plasmid partitioning protein RepB | - |
| A3858_RS19980 () | 112063..113247 | - | 1185 | WP_011331445.1 | Sporulation initiation inhibitor protein Soj | VF |
| A3858_RS22855 () | 113462..113689 | + | 228 | WP_011331446.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| A3858_RS19990 () | 113679..114074 | + | 396 | WP_011331447.1 | PIN domain-containing protein | Toxin Detail |
| A3858_RS19995 () | 114154..115038 | - | 885 | WP_061350894.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| A3858_RS20000 () | 115751..116344 | + | 594 | WP_011331449.1 | biliverdin-producing heme oxygenase | - |
| A3858_RS20005 () | 116412..119207 | + | 2796 | WP_061350895.1 | Phytochrome-like protein cph2 | VF |
| A3858_RS22860 () | 119388..119507 | - | 120 | Protein_122 | IS3 family transposase ISPmar2 | Transposase |
| A3858_RS20010 () | 119669..120223 | + | 555 | WP_011331451.1 | hypothetical protein | - |
| A3858_RS20015 () | 120223..121257 | + | 1035 | WP_011331452.1 | ATP-binding protein | - |
| A3858_RS20020 () | 121254..121718 | + | 465 | WP_011331453.1 | response regulator | - |
| A3858_RS22865 () | 122023..122261 | + | 239 | Protein_126 | IS5 family transposase ISRhsp4 | Transposase |
| A3858_RS20025 () | 122728..124218 | + | 1491 | WP_011331455.1 | SulP family inorganic anion transporter | - |
| A3858_RS20030 () | 124230..125078 | + | 849 | WP_017140509.1 | universal stress protein | - |
| A3858_RS20035 () | 125085..125420 | + | 336 | WP_011331456.1 | TraR/DksA C4-type zinc finger protein | - |
| A3858_RS20040 () | 125452..126702 | + | 1251 | WP_011331457.1 | MFS transporter | - |
| A3858_RS20045 () | 126873..127157 | + | 285 | WP_011331458.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| A3858_RS20050 () | 127154..128212 | + | 1059 | WP_011331459.1 | permease | - |
| A3858_RS20055 () | 128225..128455 | + | 231 | WP_011331460.1 | thioredoxin family protein | - |
| A3858_RS20060 () | 128452..128769 | + | 318 | WP_011331461.1 | hypothetical protein | - |
| A3858_RS20065 () | 128987..129448 | + | 462 | WP_080588249.1 | hypothetical protein | - |
| A3858_RS20070 () | 130081..131208 | + | 1128 | WP_061350897.1 | D-inositol 3-phosphate glycosyltransferase | VF |
| A3858_RS23565 () | 131280..131435 | - | 156 | WP_011331463.1 | hypothetical protein | - |
| A3858_RS20075 () | 131673..132842 | - | 1170 | WP_050988691.1 | acyltransferase | - |
| A3858_RS20080 () | 133261..134073 | + | 813 | WP_011331465.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| A3858_RS20085 () | 134073..135080 | + | 1008 | WP_011331466.1 | ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase | - |
| A3858_RS20090 () | 135124..136362 | + | 1239 | WP_011331467.1 | organoarsenical effux MFS transporter ArsJ | - |
| A3858_RS22870 () | 136769..137020 | - | 252 | Protein_142 | IS66 family transposase ISRel24 | Transposase |
| A3858_RS20095 () | 137279..137623 | + | 345 | Protein_143 | IS110 family transposase ISAtu7 | Transposase |
| A3858_RS22875 () | 137625..138068 | - | 444 | Protein_144 | transposase | - |
| A3858_RS22880 () | 138126..138779 | - | 654 | Protein_145 | IS3 family transposase ISPam3 | Transposase |
| A3858_RS20110 () | 139068..140285 | - | 1218 | WP_011331470.1 | transposase | - |
| A3858_RS23570 () | 140451..140978 | - | 528 | WP_160384182.1 | hypothetical protein | - |
| A3858_RS20120 () | 141832..142158 | + | 327 | WP_017140546.1 | hypothetical protein | - |
| A3858_RS20125 () | 142287..142637 | + | 351 | WP_011331471.1 | hypothetical protein | - |
| A3858_RS20130 () | 142704..142994 | + | 291 | WP_011331472.1 | type IV conjugative transfer system protein TraL | - |
| A3858_RS20135 () | 142982..143548 | + | 567 | WP_017140545.1 | type IV conjugative transfer system protein TraE | - |
| A3858_RS20140 () | 143545..144264 | + | 720 | WP_011331474.1 | type-F conjugative transfer system secretin TraK | - |
| A3858_RS20145 () | 144264..145517 | + | 1254 | WP_011331475.1 | TraB/VirB10 family protein | - |
| A3858_RS20150 () | 145514..145942 | + | 429 | WP_011331476.1 | TraV family lipoprotein | - |
| A3858_RS20155 () | 145939..148432 | + | 2494 | Protein_155 | TraC family protein | - |
| A3858_RS20160 () | 148429..148747 | + | 319 | Protein_156 | hypothetical protein | - |
| A3858_RS20165 () | 148725..149085 | + | 361 | Protein_157 | TrbI F-type domain-containing protein | - |
| A3858_RS20170 () | 149082..149602 | + | 521 | Protein_158 | S26 family signal peptidase | - |
| A3858_RS20175 () | 149610..150234 | + | 625 | Protein_159 | hypothetical protein | - |
| A3858_RS20180 () | 150231..151217 | + | 987 | WP_011331482.1 | TraU family protein | - |
| A3858_RS20185 () | 151178..151927 | + | 750 | WP_065462933.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| A3858_RS23575 () | 151924..152496 | + | 573 | WP_196772434.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|