MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 58029 bp
Accession: NZ_CP015202 Location: 6242926..6300954 Organism: Pseudomonas putida B6-2 Replicon: chromosome
Accession: NZ_CP015202 Location: 6242926..6300954 Organism: Pseudomonas putida B6-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KKK_RS28185 () | 6238045..6239907 | - | 1863 | WP_019750504.1 | protein translocase subunit SecD | - |
| KKK_RS28190 () | 6239971..6240306 | - | 336 | WP_003248556.1 | preprotein translocase subunit YajC | - |
| KKK_RS28195 () | 6240349..6241464 | - | 1116 | WP_003248558.1 | tRNA guanosine(34) transglycosylase Tgt | - |
| KKK_RS28200 () | 6241479..6242528 | - | 1050 | WP_004576301.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| KKK_RS28210 () | 6242926..6244134 | + | 1209 | WP_019750503.1 | Prophage integrase IntS ; Integrase | Integrase |
| KKK_RS28215 () | 6244134..6244931 | + | 798 | WP_019750502.1 | hypothetical protein | - |
| KKK_RS28220 () | 6245041..6245265 | + | 225 | WP_019750501.1 | AlpA family phage regulatory protein | - |
| KKK_RS28225 () | 6245550..6245732 | + | 183 | WP_019750500.1 | hypothetical protein | - |
| KKK_RS28230 () | 6245729..6245953 | + | 225 | WP_019750499.1 | hypothetical protein | - |
| KKK_RS28235 () | 6245950..6246198 | + | 249 | WP_019750498.1 | hypothetical protein | - |
| KKK_RS28240 () | 6246201..6247235 | + | 1035 | WP_050543037.1 | toprim domain-containing protein | - |
| KKK_RS28245 () | 6247228..6248763 | + | 1536 | WP_019750496.1 | DUF3631 domain-containing protein | - |
| KKK_RS28250 () | 6248763..6249053 | + | 291 | WP_019750495.1 | hypothetical protein | - |
| KKK_RS28255 () | 6249190..6249543 | + | 354 | WP_019750494.1 | hypothetical protein | - |
| KKK_RS28260 () | 6249566..6250747 | + | 1182 | WP_110096821.1 | phage major capsid protein | - |
| KKK_RS28265 () | 6251872..6252105 | + | 234 | WP_019750492.1 | hypothetical protein | - |
| KKK_RS28270 () | 6252488..6253135 | + | 648 | WP_029380519.1 | serine protease | - |
| KKK_RS28275 () | 6253306..6253785 | + | 480 | WP_019750490.1 | GNAT family N-acetyltransferase | - |
| KKK_RS28280 () | 6253796..6254092 | - | 297 | WP_004576347.1 | putative addiction module antidote protein | Antitoxin Detail |
| KKK_RS28285 () | 6254089..6254382 | - | 294 | WP_004576348.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KKK_RS28290 () | 6254606..6255499 | + | 894 | WP_019750488.1 | effector locus protein | - |
| KKK_RS28295 () | 6255536..6256303 | - | 768 | WP_019750487.1 | phosphonate ABC transporter, permease protein PhnE | - |
| KKK_RS28300 () | 6256300..6257127 | - | 828 | WP_004576350.1 | ABC transporter permease subunit | - |
| KKK_RS28305 () | 6257121..6257930 | - | 810 | WP_019750486.1 | phosphonate ABC transporter ATP-binding protein | - |
| KKK_RS28310 () | 6257927..6258781 | - | 855 | WP_014861459.1 | putative selenate ABC transporter substrate-binding protein | - |
| KKK_RS28315 () | 6258908..6259942 | + | 1035 | WP_019750485.1 | selenide, water dikinase SelD | - |
| KKK_RS28320 () | 6259942..6261054 | + | 1113 | WP_019750484.1 | tRNA 2-selenouridine(34) synthase MnmH | - |
| KKK_RS28325 () | 6261190..6261576 | - | 387 | WP_003248584.1 | DUF1311 domain-containing protein | - |
| KKK_RS28330 () | 6261597..6262136 | - | 540 | WP_004576355.1 | hypothetical protein | - |
| KKK_RS28335 () | 6262223..6262786 | - | 564 | WP_003248588.1 | GNAT family N-acetyltransferase | - |
| KKK_RS28340 () | 6263051..6263434 | - | 384 | WP_029380517.1 | YkgJ family cysteine cluster protein | - |
| KKK_RS28345 () | 6263595..6264722 | - | 1128 | WP_019750482.1 | hypothetical protein | VF |
| KKK_RS28350 () | 6264837..6266045 | - | 1209 | WP_014861452.1 | alanine transaminase | - |
| KKK_RS28355 () | 6266356..6267243 | - | 888 | WP_003248596.1 | heme o synthase | - |
| KKK_RS28360 () | 6267255..6267587 | - | 333 | WP_003248599.1 | cytochrome o ubiquinol oxidase subunit IV | - |
| KKK_RS28365 () | 6267587..6268213 | - | 627 | WP_012051225.1 | cytochrome o ubiquinol oxidase subunit III | - |
| KKK_RS28370 () | 6268217..6270235 | - | 2019 | WP_003248603.1 | cytochrome o ubiquinol oxidase subunit I | - |
| KKK_RS28375 () | 6270239..6271180 | - | 942 | WP_003248605.1 | ubiquinol oxidase subunit II | - |
| KKK_RS28380 () | 6271740..6272246 | - | 507 | WP_003248609.1 | disulfide bond formation protein B | - |
| KKK_RS28385 () | 6272703..6273881 | - | 1179 | WP_019750481.1 | NO-inducible flavohemoprotein | - |
| KKK_RS28390 () | 6274036..6275592 | + | 1557 | WP_019750480.1 | Nitric oxide reductase transcription regulator NorR1 | VF |
| KKK_RS28395 () | 6275783..6297289 | + | 21507 | WP_199880456.1 | hypothetical protein | VF |
| KKK_RS28400 () | 6297353..6298789 | + | 1437 | WP_019750478.1 | TolC family outer membrane protein | - |
| KKK_RS28405 () | 6298786..6300954 | + | 2169 | WP_019750477.1 | type I secretion system permease/ATPase | - |
| KKK_RS28410 () | 6300951..6302135 | + | 1185 | WP_003247300.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| KKK_RS28415 () | 6302523..6303422 | + | 900 | WP_019750476.1 | chemotaxis protein | - |
| KKK_RS28420 () | 6303511..6303822 | + | 312 | WP_019750475.1 | hypothetical protein | - |
| KKK_RS28425 () | 6303819..6304553 | + | 735 | WP_019750474.1 | YkgJ family cysteine cluster protein | - |
| KKK_RS28430 () | 6304754..6304978 | + | 225 | WP_012051219.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|