MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 26021 bp
Accession: NZ_CP015194 Location: 1972660..1998680 Organism: Shewanella sp. Pdp11 Replicon: chromosome
Accession: NZ_CP015194 Location: 1972660..1998680 Organism: Shewanella sp. Pdp11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYJ58_RS08680 () | 1968518..1969414 | + | 897 | WP_106649788.1 | fructokinase | - |
| AYJ58_RS08685 () | 1969644..1971764 | + | 2121 | WP_106649789.1 | methyl-accepting chemotaxis protein | - |
| AYJ58_RS08690 () | 1971912..1972277 | - | 366 | WP_106649790.1 | hypothetical protein | - |
| AYJ58_RS08700 () | 1972660..1974201 | + | 1542 | WP_011846135.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| AYJ58_RS08705 () | 1974321..1974779 | + | 459 | WP_106651785.1 | hypothetical protein | - |
| AYJ58_RS08710 () | 1975325..1975534 | - | 210 | WP_106649791.1 | hypothetical protein | - |
| AYJ58_RS08715 () | 1976351..1977229 | + | 879 | WP_106649792.1 | hypothetical protein | - |
| AYJ58_RS08720 () | 1977777..1979453 | + | 1677 | WP_106649793.1 | type I restriction-modification system subunit M | - |
| AYJ58_RS08725 () | 1979443..1980510 | + | 1068 | WP_106649794.1 | DUF1016 family protein | - |
| AYJ58_RS08730 () | 1980574..1981887 | + | 1314 | WP_106649795.1 | restriction endonuclease subunit S | - |
| AYJ58_RS08735 () | 1981888..1983126 | + | 1239 | WP_106649796.1 | SIR2 family protein | - |
| AYJ58_RS08740 () | 1983128..1986292 | + | 3165 | WP_106649797.1 | type I restriction endonuclease subunit R | - |
| AYJ58_RS08745 () | 1986366..1987100 | + | 735 | WP_106649798.1 | DUF91 domain-containing protein | - |
| AYJ58_RS08750 () | 1987801..1988136 | + | 336 | WP_106649799.1 | helix-turn-helix domain-containing protein | - |
| AYJ58_RS08755 () | 1988123..1989364 | + | 1242 | WP_106649800.1 | Serine/threonine-protein kinase toxin HipA | VF |
| AYJ58_RS08760 () | 1989365..1989796 | + | 432 | WP_106649801.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| AYJ58_RS08765 () | 1990069..1991277 | + | 1209 | WP_001206290.1 | IS4 family transposase IS10A | Transposase |
| AYJ58_RS08770 () | 1991419..1992528 | + | 1110 | WP_157825771.1 | hypothetical protein | - |
| AYJ58_RS08775 () | 1992667..1993590 | + | 924 | WP_157825772.1 | hypothetical protein | - |
| AYJ58_RS08780 () | 1993898..1994308 | - | 411 | WP_106649804.1 | hypothetical protein | - |
| AYJ58_RS08785 () | 1994563..1995351 | + | 789 | WP_106649805.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| AYJ58_RS08790 () | 1995344..1996279 | + | 936 | WP_106649806.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| AYJ58_RS08795 () | 1996398..1996808 | - | 411 | WP_106649807.1 | hypothetical protein | - |
| AYJ58_RS08800 () | 1996845..1997102 | - | 258 | WP_106649808.1 | hypothetical protein | - |
| AYJ58_RS08805 () | 1997220..1998680 | - | 1461 | WP_106649809.1 | Tyrosine recombinase XerH ; Integrase | Integrase |
| AYJ58_RS08810 () | 1998869..1999255 | + | 387 | WP_157825773.1 | hypothetical protein | - |
| AYJ58_RS08820 () | 2000070..2001908 | - | 1839 | WP_106649811.1 | RNA polymerase sigma factor RpoD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|