MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 117661 bp
Accession: NZ_CP015170 Location: 1..117661 Organism: Acetobacter ascendens strain LMG 1591 Replicon: plasmid unnamed2
Accession: NZ_CP015170 Location: 1..117661 Organism: Acetobacter ascendens strain LMG 1591 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4R89_RS17105 () | 2..2080 | - | 2079 | Protein_0 | lactate dehydrogenase | - |
| A4R89_RS15135 () | 2504..3178 | + | 675 | WP_197460628.1 | ParA family protein | - |
| A4R89_RS15140 () | 3175..3873 | + | 699 | WP_070325572.1 | hypothetical protein | - |
| A4R89_RS15145 () | 4611..5534 | - | 924 | WP_003631062.1 | plasmid replication initiator RepA | - |
| A4R89_RS15150 () | 6026..7516 | - | 1491 | WP_070325573.1 | tyrosine-type recombinase/integrase | - |
| A4R89_RS15165 () | 8754..9257 | + | 504 | Protein_6 | phage antirepressor protein | - |
| A4R89_RS15170 () | 9353..9631 | + | 279 | WP_006115563.1 | HU family DNA-binding protein | - |
| A4R89_RS16700 () | 9710..9928 | + | 219 | WP_170315285.1 | WGR domain-containing protein | - |
| A4R89_RS15175 () | 10121..11200 | - | 1080 | WP_070325574.1 | IS5 family transposase ISMex35 | Transposase |
| A4R89_RS15180 () | 11378..13600 | - | 2223 | WP_070325575.1 | TonB-dependent receptor | - |
| A4R89_RS15185 () | 13676..14257 | - | 582 | WP_070325576.1 | hypothetical protein | - |
| A4R89_RS15190 () | 14578..15642 | + | 1065 | WP_070325577.1 | TonB family protein | - |
| A4R89_RS15195 () | 15886..16965 | + | 1080 | WP_070325578.1 | IS5 family transposase ISMex35 | Transposase |
| A4R89_RS15205 () | 17111..18198 | + | 1088 | WP_157886618.1 | IS3 family transposase ISPam3 | Transposase |
| A4R89_RS15210 () | 18224..19219 | + | 996 | WP_070325580.1 | Fic family protein | - |
| A4R89_RS15215 () | 19248..19847 | - | 600 | Protein_16 | IS630 family transposase ISMex41 | Transposase |
| A4R89_RS15220 () | 20063..21448 | - | 1386 | WP_070324607.1 | IS1380 family transposase | - |
| A4R89_RS15225 () | 21506..21865 | - | 360 | WP_070325581.1 | IS630 family transposase ISMdi1 | Transposase |
| A4R89_RS15230 () | 21956..22999 | - | 1044 | WP_070325582.1 | hypothetical protein | - |
| A4R89_RS15235 () | 22999..23490 | - | 492 | WP_006115566.1 | hypothetical protein | - |
| A4R89_RS15240 () | 23456..23866 | - | 411 | WP_070325583.1 | nucleotidyltransferase domain-containing protein | - |
| A4R89_RS16710 () | 23964..24759 | - | 796 | Protein_22 | IS5 family transposase | - |
| A4R89_RS15245 () | 24781..25272 | - | 492 | WP_035366749.1 | hypothetical protein | - |
| A4R89_RS15250 () | 25274..25726 | - | 453 | WP_026019419.1 | Rrf2 family transcriptional regulator | - |
| A4R89_RS15255 () | 25815..27131 | + | 1317 | WP_070325584.1 | hypothetical protein | - |
| A4R89_RS15260 () | 27280..28076 | + | 797 | Protein_26 | IS5 family transposase ISMex42 | Transposase |
| A4R89_RS15265 () | 28122..28580 | + | 459 | Protein_27 | nitric oxide reductase | - |
| A4R89_RS16715 () | 28681..29435 | + | 755 | WP_087651418.1 | IS5 family transposase | - |
| A4R89_RS15280 () | 29564..30814 | - | 1251 | WP_070324420.1 | IS701 family transposase IS1452 | Transposase |
| A4R89_RS15285 () | 31181..31692 | + | 512 | Protein_30 | IS5 family transposase ISMex42 | Transposase |
| A4R89_RS15290 () | 31786..33171 | + | 1386 | WP_070325586.1 | IS1380-like element IS1380A family transposase | - |
| A4R89_RS15295 () | 33356..33646 | + | 291 | Protein_32 | IS5 family transposase ISMex42 | Transposase |
| A4R89_RS16730 () | 33784..34341 | + | 558 | Protein_33 | nitric oxide reductase | - |
| A4R89_RS15305 () | 34451..35530 | - | 1080 | WP_070325589.1 | IS5 family transposase ISMex35 | Transposase |
| A4R89_RS15310 () | 35609..36460 | + | 852 | Protein_35 | cbb3-type cytochrome c oxidase subunit I | - |
| A4R89_RS15315 () | 36467..36832 | + | 366 | WP_070325590.1 | DUF488 family protein | - |
| A4R89_RS15320 () | 36894..37283 | + | 390 | WP_003631279.1 | PAS domain-containing protein | - |
| A4R89_RS15325 () | 37280..37552 | + | 273 | WP_023524174.1 | DUF1971 domain-containing protein | - |
| A4R89_RS15330 () | 37566..37781 | - | 216 | WP_019089624.1 | DUF2945 domain-containing protein | - |
| A4R89_RS16735 () | 37817..38395 | + | 579 | WP_006115867.1 | DUF488 domain-containing protein | - |
| A4R89_RS17065 () | 38875..39093 | + | 219 | WP_157886619.1 | helix-turn-helix domain-containing protein | - |
| A4R89_RS15340 () | 39127..39765 | - | 639 | WP_006115571.1 | HPP family protein | - |
| A4R89_RS15345 () | 39974..41359 | + | 1386 | WP_070325592.1 | IS1380-like element IS1380A family transposase | - |
| A4R89_RS15350 () | 41621..42643 | + | 1023 | WP_070324399.1 | IS110 family transposase ISMdi12 | Transposase |
| A4R89_RS15355 () | 42917..43597 | + | 681 | Protein_45 | IS110 family transposase ISMdi12 | Transposase |
| A4R89_RS15360 () | 43879..44718 | - | 840 | Protein_46 | IS5 family transposase ISMex35 | Transposase |
| A4R89_RS15365 () | 44797..45123 | + | 327 | Protein_47 | hypothetical protein | - |
| A4R89_RS15370 () | 45246..46679 | + | 1434 | WP_070325593.1 | hypothetical protein | - |
| A4R89_RS15375 () | 46785..47009 | + | 225 | WP_012813340.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| A4R89_RS15380 () | 47009..47413 | + | 405 | WP_070325489.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| A4R89_RS16745 () | 47608..47808 | + | 201 | WP_012813343.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| A4R89_RS15385 () | 47809..48114 | + | 306 | WP_042788970.1 | CcdB family protein | - |
| A4R89_RS15390 () | 48394..49008 | - | 615 | WP_070325618.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| A4R89_RS15395 () | 49134..51311 | + | 2178 | Protein_54 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| A4R89_RS15400 () | 51405..52790 | + | 1386 | WP_070325023.1 | IS1380-like element IS1380A family transposase | - |
| A4R89_RS15405 () | 52975..53694 | + | 720 | Protein_56 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| A4R89_RS17190 () | 53731..53901 | + | 171 | WP_169818449.1 | hypothetical protein | - |
| A4R89_RS15410 () | 53928..57062 | - | 3135 | WP_070325595.1 | efflux RND transporter permease subunit | - |
| A4R89_RS15415 () | 57062..58096 | - | 1035 | WP_070325596.1 | efflux RND transporter periplasmic adaptor subunit | - |
| A4R89_RS15420 () | 58093..59535 | - | 1443 | WP_211274220.1 | TolC family protein | - |
| A4R89_RS15425 () | 59528..60178 | - | 651 | WP_010516881.1 | cation diffusion facilitator family transporter | - |
| A4R89_RS15430 () | 60252..60650 | + | 399 | WP_070325597.1 | helix-turn-helix domain-containing protein | - |
| A4R89_RS15435 () | 61097..62482 | - | 1386 | WP_082247105.1 | IS1380 family transposase | - |
| A4R89_RS16750 () | 62499..62813 | - | 315 | WP_082247106.1 | hypothetical protein | - |
| A4R89_RS16755 () | 62810..63253 | - | 444 | Protein_65 | transposase | - |
| A4R89_RS16760 () | 63313..64070 | + | 758 | WP_099046885.1 | IS5 family transposase ISPak1 | Transposase |
| A4R89_RS15455 () | 64621..65265 | + | 645 | Protein_67 | SAM-dependent DNA methyltransferase | - |
| A4R89_RS15460 () | 65450..66835 | - | 1386 | WP_070325023.1 | IS1380-like element IS1380A family transposase | - |
| A4R89_RS15465 () | 66929..67903 | + | 975 | Protein_69 | N-6 DNA methylase | - |
| A4R89_RS15470 () | 67900..68304 | + | 405 | WP_070325478.1 | nucleotidyltransferase substrate binding protein | - |
| A4R89_RS15475 () | 68301..68603 | + | 303 | WP_003630865.1 | nucleotidyltransferase domain-containing protein | - |
| A4R89_RS15480 () | 68616..69863 | + | 1248 | WP_070325477.1 | restriction endonuclease subunit S | - |
| A4R89_RS15485 () | 69860..73039 | + | 3180 | WP_070325599.1 | type I restriction endonuclease subunit R | - |
| A4R89_RS15495 () | 73536..74722 | + | 1187 | WP_157886562.1 | IS3 family transposase ISGxy1 | Transposase |
| A4R89_RS15500 () | 75097..76500 | + | 1404 | WP_070325600.1 | PLP-dependent aminotransferase family protein | - |
| A4R89_RS15505 () | 76839..77321 | + | 483 | WP_025440015.1 | MSMEG_0572 family nitrogen starvation response protein | - |
| A4R89_RS15510 () | 77346..78320 | + | 975 | WP_070325601.1 | Nit6803 family nitriliase | - |
| A4R89_RS15515 () | 78317..79426 | + | 1110 | WP_070325602.1 | MSMEG_0568 family radical SAM protein | - |
| A4R89_RS15520 () | 79423..79986 | + | 564 | WP_025440012.1 | GNAT family N-acetyltransferase | - |
| A4R89_RS15525 () | 79983..80954 | + | 972 | WP_025440011.1 | sll0787 family AIR synthase-like protein | - |
| A4R89_RS15530 () | 80951..82129 | + | 1179 | WP_070325603.1 | Mannosylfructose-phosphate synthase | VF |
| A4R89_RS15535 () | 82117..82404 | + | 288 | WP_010515873.1 | MSMEG_0570 family nitrogen starvation response protein | - |
| A4R89_RS15540 () | 82421..83668 | + | 1248 | WP_070325604.1 | MSMEG_0569 family flavin-dependent oxidoreductase | - |
| A4R89_RS15545 () | 83683..85455 | + | 1773 | WP_070325605.1 | AMP-binding protein | - |
| A4R89_RS15550 () | 85734..87087 | + | 1354 | Protein_85 | cytochrome ubiquinol oxidase subunit I | - |
| A4R89_RS15565 () | 88162..89190 | - | 1029 | WP_070325606.1 | Dyp-type peroxidase | - |
| A4R89_RS15570 () | 89525..90958 | + | 1434 | WP_070325607.1 | cytochrome ubiquinol oxidase subunit I | - |
| A4R89_RS15575 () | 90962..91981 | + | 1020 | WP_070325608.1 | cytochrome d ubiquinol oxidase subunit II | - |
| A4R89_RS16765 () | 91968..92117 | + | 150 | WP_082247107.1 | DUF2474 domain-containing protein | - |
| A4R89_RS15580 () | 92174..92638 | + | 465 | WP_070325609.1 | nitrate reductase associated protein | - |
| A4R89_RS15585 () | 92734..95037 | + | 2304 | WP_070325610.1 | FdhF/YdeP family oxidoreductase | - |
| A4R89_RS15590 () | 95186..96010 | + | 825 | WP_082247108.1 | IS5 family transposase IS12528 | Transposase |
| A4R89_RS16775 () | 96594..96785 | + | 192 | Protein_94 | transposase | - |
| A4R89_RS16780 () | 96975..97091 | + | 117 | Protein_95 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| A4R89_RS15600 () | 97373..98395 | - | 1023 | WP_070325611.1 | IS110 family transposase ISMdi12 | Transposase |
| A4R89_RS15605 () | 98657..100042 | - | 1386 | WP_070325465.1 | IS1380 family transposase | - |
| A4R89_RS15610 () | 100135..100438 | - | 304 | Protein_98 | transposase | - |
| A4R89_RS15615 () | 100885..102268 | - | 1384 | Protein_99 | IS1380 family transposase | - |
| A4R89_RS15620 () | 102363..102563 | - | 201 | Protein_100 | hypothetical protein | - |
| A4R89_RS15625 () | 102800..103282 | - | 483 | WP_070325613.1 | DUF3085 domain-containing protein | - |
| A4R89_RS16790 () | 103397..104151 | + | 755 | WP_157886616.1 | IS5 family transposase | - |
| A4R89_RS15640 () | 104223..106127 | - | 1905 | WP_070325614.1 | ParB N-terminal domain-containing protein | - |
| A4R89_RS15645 () | 106313..111439 | - | 5127 | WP_070325615.1 | DEAD/DEAH box helicase family protein | - |
| A4R89_RS15655 () | 111863..112537 | + | 675 | WP_197460628.1 | ParA family protein | - |
| A4R89_RS15660 () | 112534..113232 | + | 699 | WP_070325572.1 | hypothetical protein | - |
| A4R89_RS15665 () | 113970..114893 | - | 924 | WP_003631062.1 | plasmid replication initiator RepA | - |
| A4R89_RS15670 () | 115385..116874 | - | 1490 | Protein_108 | Tn3 family transposase TnpR_TnXo19 | Transposase |
| A4R89_RS15115 () | 116964..117618 | - | 655 | Protein_109 | IS3 family transposase ISPam3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|