MGE detailed information
MGE type: Genomic_island MGE length: 9929 bp
Accession: NZ_CP015137 Location: 4809528..4819456 Organism: Dickeya solani IPO 2222 Replicon: chromosome
Accession: NZ_CP015137 Location: 4809528..4819456 Organism: Dickeya solani IPO 2222 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4U42_RS20530 () | 4804666..4805064 | + | 399 | WP_022633731.1 | cupin domain-containing protein | - |
| A4U42_RS20535 () | 4805220..4806254 | - | 1035 | WP_022633732.1 | harpin HrpZ family protein | - |
| A4U42_RS20540 () | 4806415..4806825 | - | 411 | WP_022633733.1 | hypothetical protein | - |
| A4U42_RS20545 () | 4806822..4807010 | - | 189 | WP_022633734.1 | hypothetical protein | - |
| A4U42_RS20550 () | 4807045..4809114 | - | 2070 | WP_023637836.1 | type III secretion system outer membrane ring subunit SctC | - |
| A4U42_RS20555 () | 4809107..4809541 | - | 435 | WP_022633737.1 | hypothetical protein | - |
| A4U42_RS20560 () | 4809528..4809755 | - | 228 | WP_022633738.1 | type III secretion protein HrpF | - |
| A4U42_RS20565 () | 4810040..4810438 | - | 399 | WP_026594479.1 | type II toxin-antitoxin system YafO family toxin | Toxin Detail |
| A4U42_RS20570 () | 4810441..4810734 | - | 294 | WP_022633740.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| A4U42_RS20575 () | 4810952..4812001 | - | 1050 | WP_022633741.1 | hypothetical protein | - |
| A4U42_RS20580 () | 4812541..4813701 | + | 1161 | WP_022633742.1 | alpha/beta fold hydrolase | - |
| A4U42_RS20585 () | 4813712..4815025 | - | 1314 | WP_022633743.1 | lytic murein transglycosylase | - |
| A4U42_RS20590 () | 4815287..4815889 | - | 603 | WP_022633745.1 | type III secretion system stator protein SctL | - |
| A4U42_RS20595 () | 4816018..4816611 | - | 594 | WP_023637837.1 | hypothetical protein | - |
| A4U42_RS20600 () | 4816614..4817396 | - | 783 | WP_023637838.1 | Yop proteins translocation lipoprotein J | VF |
| A4U42_RS20605 () | 4817483..4817848 | - | 366 | WP_022633748.1 | EscI/YscI/HrpB family type III secretion system inner rod protein | - |
| A4U42_RS20610 () | 4817929..4818135 | - | 207 | WP_033111884.1 | hypothetical protein | - |
| A4U42_RS20615 () | 4818301..4819284 | - | 984 | WP_022633749.1 | C4-dicarboxylate transport transcriptional regulatory protein DctD | VF |
| A4U42_RS20625 () | 4819727..4820368 | - | 642 | WP_022633751.1 | response regulator transcription factor | - |
| A4U42_RS20630 () | 4820402..4821868 | - | 1467 | WP_022633752.1 | PAS domain S-box protein | - |
| A4U42_RS20635 () | 4822134..4822688 | - | 555 | WP_022633753.1 | RNA polymerase sigma factor | - |
| A4U42_RS20640 () | 4823011..4824180 | + | 1170 | WP_022633754.1 | type III secretion system gatekeeper subunit SctW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|