MGE detailed information
MGE type: Prophage MGE length: 27490 bp
Accession: NZ_CP015099 Location: 84024..111513 Organism: Glaesserella parasuis strain SC1401 Replicon: chromosome
Accession: NZ_CP015099 Location: 84024..111513 Organism: Glaesserella parasuis strain SC1401 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4U84_RS00330 () | 81575..82018 | - | 444 | WP_062923824.1 | hypothetical protein | - |
| A4U84_RS00335 () | 82019..82585 | - | 567 | WP_038514059.1 | UbiX family flavin prenyltransferase | - |
| A4U84_RS00340 () | 82766..83716 | + | 951 | WP_016528005.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| A4U84_RS00345 () | 84024..85400 | + | 1377 | WP_062923825.1 | Na+/H+ antiporter family protein | - |
| A4U84_RS00350 () | 85514..86317 | + | 804 | WP_062923826.1 | exodeoxyribonuclease III | - |
| A4U84_RS11570 () | 87050..87121 | + | 72 | Protein_70 | Autotransporter adhesin NhhA | VF |
| A4U84_RS11575 () | 87686..88084 | + | 399 | Protein_71 | Autotransporter adhesin NhhA | VF |
| A4U84_RS11580 () | 88400..88777 | + | 378 | Protein_72 | Autotransporter adhesin NhhA | VF |
| A4U84_RS11585 () | 90761..91189 | + | 429 | Protein_73 | Autotransporter adhesin NhhA | VF |
| A4U84_RS11590 () | 91193..91306 | + | 114 | Protein_74 | Autotransporter adhesin NhhA | VF |
| A4U84_RS11595 () | 91472..91600 | + | 129 | Protein_75 | Autotransporter adhesin NhhA | VF |
| A4U84_RS11600 () | 91646..91843 | + | 198 | WP_202386659.1 | Autotransporter adhesin NhhA | VF |
| A4U84_RS00360 () | 91920..92300 | - | 381 | WP_043896063.1 | YacL family protein | - |
| A4U84_RS00365 () | 92384..92671 | - | 288 | Protein_78 | excinuclease ABC subunit UvrA | - |
| A4U84_RS00370 () | 92599..93123 | - | 525 | WP_062923828.1 | hypothetical protein | - |
| A4U84_RS00375 () | 93177..93680 | - | 504 | WP_062924483.1 | tail assembly protein | - |
| A4U84_RS00380 () | 93710..94471 | - | 762 | WP_062924482.1 | C40 family peptidase | - |
| A4U84_RS00385 () | 94557..94733 | + | 177 | WP_021113607.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| A4U84_RS00390 () | 94780..95193 | + | 414 | WP_021113608.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| A4U84_RS00395 () | 95190..95927 | - | 738 | WP_062923829.1 | phage minor tail protein L | - |
| A4U84_RS00400 () | 95937..98516 | - | 2580 | WP_062923830.1 | hypothetical protein | - |
| A4U84_RS00405 () | 98547..99584 | - | 1038 | WP_081120179.1 | tape measure protein | - |
| A4U84_RS11605 () | 99799..100554 | - | 756 | WP_198525440.1 | recombinase | - |
| A4U84_RS10940 () | 100543..101574 | - | 1032 | Protein_88 | minor capsid protein | - |
| A4U84_RS00415 () | 101537..102934 | - | 1398 | WP_062923831.1 | DUF4055 domain-containing protein | - |
| A4U84_RS00420 () | 102944..104179 | - | 1236 | WP_062923832.1 | PBSX family phage terminase large subunit | - |
| A4U84_RS00425 () | 104163..104372 | - | 210 | Protein_91 | terminase small subunit | - |
| A4U84_RS00430 () | 104442..105412 | + | 971 | Protein_92 | IS256 family transposase ISEc39 | Transposase |
| A4U84_RS00435 () | 105452..105922 | - | 471 | WP_075592999.1 | Arm DNA-binding domain-containing protein | - |
| A4U84_RS00440 () | 106056..107627 | - | 1572 | WP_062923833.1 | glutamine-hydrolyzing GMP synthase | - |
| A4U84_RS00445 () | 107605..108213 | - | 609 | WP_021113517.1 | hypothetical protein | - |
| A4U84_RS00450 () | 108421..109266 | - | 846 | WP_062923834.1 | antirepressor | - |
| A4U84_RS00455 () | 109282..109914 | - | 633 | WP_062923835.1 | DUF1919 domain-containing protein | - |
| A4U84_RS00460 () | 110050..111513 | - | 1464 | WP_005712302.1 | IMP dehydrogenase | - |
| A4U84_RS00465 () | 111665..113098 | - | 1434 | WP_035490798.1 | glycogen synthase GlgA | - |
| A4U84_RS00470 () | 113238..114527 | - | 1290 | WP_021118146.1 | glucose-1-phosphate adenylyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|