MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 56541 bp
Accession: NZ_CP015097 Location: 1..56541 Organism: Pelagibaca abyssi strain JLT2014 Replicon: plasmid pPABY7
Accession: NZ_CP015097 Location: 1..56541 Organism: Pelagibaca abyssi strain JLT2014 Replicon: plasmid pPABY7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Ga0080574_RS25310 () | 1815..2735 | - | 921 | WP_076706326.1 | ABC transporter permease | - |
| Ga0080574_RS25315 () | 2735..3715 | - | 981 | WP_076706327.1 | ABC transporter permease | - |
| Ga0080574_RS25320 () | 3777..5393 | - | 1617 | WP_198039870.1 | ABC transporter substrate-binding protein | - |
| Ga0080574_RS25325 () | 5716..6369 | - | 654 | WP_076706328.1 | GntR family transcriptional regulator | - |
| Ga0080574_RS25330 () | 6450..7037 | - | 588 | WP_076706329.1 | glutathione S-transferase family protein | - |
| Ga0080574_RS25335 () | 7117..8205 | + | 1089 | WP_156876488.1 | AbrB family transcriptional regulator | - |
| Ga0080574_RS25340 () | 8278..8787 | - | 510 | WP_076706331.1 | flavin reductase family protein | - |
| Ga0080574_RS25345 () | 8784..9488 | - | 705 | WP_076706332.1 | GntR family transcriptional regulator | - |
| Ga0080574_RS25350 () | 9502..10296 | - | 795 | WP_076706333.1 | Inner membrane ABC transporter permease protein YdcV | VF |
| Ga0080574_RS25355 () | 10293..11207 | - | 915 | WP_083717013.1 | ABC transporter permease | - |
| Ga0080574_RS25360 () | 11216..12256 | - | 1041 | WP_076706334.1 | ABC transporter substrate-binding protein | - |
| Ga0080574_RS25365 () | 12320..13438 | - | 1119 | WP_076706335.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| Ga0080574_RS25370 () | 13442..14695 | - | 1254 | WP_076706336.1 | acyl-CoA/acyl-ACP dehydrogenase | - |
| Ga0080574_RS25375 () | 14953..16047 | + | 1095 | WP_198039871.1 | Xaa-Pro peptidase family protein | - |
| Ga0080574_RS25380 () | 16040..17185 | + | 1146 | WP_076706338.1 | Xaa-Pro peptidase family protein | - |
| Ga0080574_RS25385 () | 17204..17635 | + | 432 | WP_076706339.1 | ester cyclase | - |
| Ga0080574_RS25390 () | 17632..18999 | + | 1368 | WP_076706340.1 | M20/M25/M40 family metallo-hydrolase | - |
| Ga0080574_RS25395 () | 19319..19708 | - | 390 | WP_076706341.1 | acyl-CoA thioesterase | - |
| Ga0080574_RS25400 () | 19759..20052 | - | 294 | WP_076706342.1 | hypothetical protein | - |
| Ga0080574_RS25405 () | 20049..21383 | - | 1335 | WP_076706343.1 | DUF1446 domain-containing protein | - |
| Ga0080574_RS25410 () | 21380..23239 | - | 1860 | WP_076706344.1 | TRAP transporter fused permease subunit | - |
| Ga0080574_RS25415 () | 23253..24215 | - | 963 | WP_076706345.1 | TAXI family TRAP transporter solute-binding subunit | - |
| Ga0080574_RS25420 () | 24342..25148 | - | 807 | WP_076706346.1 | CoA ester lyase | - |
| Ga0080574_RS25425 () | 25145..25996 | - | 852 | WP_076706347.1 | MaoC family dehydratase N-terminal domain-containing protein | - |
| Ga0080574_RS25430 () | 26007..27200 | - | 1194 | WP_076706348.1 | CoA transferase | - |
| Ga0080574_RS25435 () | 27197..28348 | - | 1152 | WP_076706349.1 | CoA transferase | - |
| Ga0080574_RS25440 () | 28365..29546 | - | 1182 | WP_076706374.1 | MaoC family dehydratase N-terminal domain-containing protein | - |
| Ga0080574_RS25445 () | 29789..30367 | - | 579 | WP_076706350.1 | cysteine hydrolase | - |
| Ga0080574_RS25450 () | 30421..31068 | - | 648 | WP_076706351.1 | GntR family transcriptional regulator | - |
| Ga0080574_RS25455 () | 31117..31917 | - | 801 | WP_076706352.1 | N-acyl homoserine lactonase family protein | - |
| Ga0080574_RS25460 () | 31927..32658 | - | 732 | WP_083717015.1 | ABC transporter ATP-binding protein | - |
| Ga0080574_RS25465 () | 32651..33430 | - | 780 | WP_076706354.1 | ABC transporter ATP-binding protein | - |
| Ga0080574_RS25470 () | 33430..34446 | - | 1017 | WP_076706355.1 | branched-chain amino acid ABC transporter permease | - |
| Ga0080574_RS25475 () | 34409..35308 | - | 900 | WP_076706356.1 | branched-chain amino acid ABC transporter permease | - |
| Ga0080574_RS25480 () | 35305..36192 | - | 888 | WP_076706357.1 | NAD(P)-dependent oxidoreductase | - |
| Ga0080574_RS25485 () | 36203..36952 | - | 750 | WP_076706358.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| Ga0080574_RS25490 () | 37026..38234 | - | 1209 | WP_076706359.1 | ABC transporter substrate-binding protein | - |
| Ga0080574_RS25495 () | 38493..39722 | + | 1230 | WP_076706360.1 | CoA transferase | - |
| Ga0080574_RS25500 () | 40001..41542 | + | 1542 | WP_076706361.1 | succinate CoA transferase | - |
| Ga0080574_RS25505 () | 41673..42926 | - | 1254 | WP_076706362.1 | saccharopine dehydrogenase family protein | - |
| Ga0080574_RS25510 () | 43001..44092 | - | 1092 | WP_076706363.1 | carboxynorspermidine decarboxylase | - |
| Ga0080574_RS25515 () | 44284..44859 | - | 576 | WP_076706364.1 | PIN domain-containing protein | Toxin Detail |
| Ga0080574_RS25520 () | 44856..45320 | - | 465 | WP_076706365.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| Ga0080574_RS25525 () | 45764..46801 | - | 1038 | WP_076706366.1 | ParB N-terminal domain-containing protein | - |
| Ga0080574_RS25530 () | 46798..48108 | - | 1311 | WP_156876489.1 | AAA family ATPase | - |
| Ga0080574_RS25535 () | 48479..49177 | + | 699 | WP_076706367.1 | hypothetical protein | - |
| Ga0080574_RS25540 () | 49278..50618 | - | 1341 | WP_198039868.1 | MmgE/PrpD family protein | - |
| Ga0080574_RS25545 () | 50636..52261 | - | 1626 | WP_076706369.1 | hydantoinase B/oxoprolinase family protein | - |
| Ga0080574_RS25550 () | 52258..54375 | - | 2118 | WP_076706370.1 | hydantoinase/oxoprolinase family protein | - |
| Ga0080574_RS25555 () | 54375..55181 | - | 807 | WP_076706371.1 | aspartate/glutamate racemase family protein | - |
| Ga0080574_RS25560 () | 55178..56395 | - | 1218 | WP_083717016.1 | cystathionine beta-lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|