MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 30421 bp
Accession: NZ_CP015096 Location: 1..30421 Organism: Pelagibaca abyssi strain JLT2014 Replicon: plasmid pPABY8
Accession: NZ_CP015096 Location: 1..30421 Organism: Pelagibaca abyssi strain JLT2014 Replicon: plasmid pPABY8
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Ga0080574_RS25120 () | 417..752 | - | 336 | WP_156876485.1 | hypothetical protein | - |
| Ga0080574_RS25125 () | 754..1380 | - | 627 | WP_076706291.1 | ParA family protein | - |
| Ga0080574_RS25130 () | 1467..3443 | - | 1977 | WP_076706292.1 | Mobilization protein A | Relaxase |
| Ga0080574_RS25135 () | 3817..4191 | + | 375 | WP_076706293.1 | hypothetical protein | - |
| Ga0080574_RS25140 () | 4384..6237 | + | 1854 | WP_076706294.1 | type IV secretory system conjugative DNA transfer family protein | - |
| Ga0080574_RS25145 () | 6234..6686 | - | 453 | WP_076706295.1 | hypothetical protein | - |
| Ga0080574_RS25150 () | 6844..8115 | + | 1272 | WP_083717009.1 | O-antigen ligase family protein | - |
| Ga0080574_RS25155 () | 8277..8570 | - | 294 | WP_076706297.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| Ga0080574_RS25160 () | 8557..8823 | - | 267 | WP_076706298.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| Ga0080574_RS25165 () | 9033..9617 | + | 585 | WP_076706299.1 | Tn3 family transposase ISPsy42 | Transposase |
| Ga0080574_RS25170 () | 9614..9847 | + | 234 | WP_076706300.1 | WGR domain-containing protein | - |
| Ga0080574_RS25175 () | 10137..10505 | - | 369 | WP_076706301.1 | hypothetical protein | - |
| Ga0080574_RS25180 () | 10505..10879 | - | 375 | WP_076706302.1 | hypothetical protein | - |
| Ga0080574_RS25185 () | 11248..11733 | + | 486 | WP_076706303.1 | hypothetical protein | - |
| Ga0080574_RS25190 () | 11750..12136 | - | 387 | WP_076706304.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| Ga0080574_RS25195 () | 12133..12360 | - | 228 | WP_076706305.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| Ga0080574_RS25200 () | 12453..12677 | - | 225 | WP_076706306.1 | hypothetical protein | - |
| Ga0080574_RS25205 () | 12926..13231 | - | 306 | WP_076706307.1 | hypothetical protein | - |
| Ga0080574_RS25210 () | 13228..13461 | - | 234 | WP_076706308.1 | hypothetical protein | - |
| Ga0080574_RS25215 () | 13458..13697 | - | 240 | WP_076706309.1 | hypothetical protein | - |
| Ga0080574_RS25220 () | 13694..14053 | - | 360 | WP_076706310.1 | DUF2958 domain-containing protein | - |
| Ga0080574_RS25225 () | 14514..14723 | - | 210 | WP_076706311.1 | hypothetical protein | - |
| Ga0080574_RS25230 () | 14741..14965 | - | 225 | WP_076706325.1 | DUF2188 domain-containing protein | - |
| Ga0080574_RS25235 () | 15032..16153 | + | 1122 | WP_076706312.1 | ImmA/IrrE family metallo-endopeptidase | - |
| Ga0080574_RS25240 () | 16150..16656 | + | 507 | WP_076706313.1 | hypothetical protein | - |
| Ga0080574_RS25245 () | 16878..17081 | + | 204 | WP_076706314.1 | hypothetical protein | - |
| Ga0080574_RS25250 () | 17084..17638 | - | 555 | WP_076706315.1 | hypothetical protein | - |
| Ga0080574_RS25255 () | 18044..18973 | - | 930 | WP_076706316.1 | DUF1738 domain-containing protein | - |
| Ga0080574_RS25260 () | 19299..20069 | - | 771 | WP_083717011.1 | abortive infection family protein | - |
| Ga0080574_RS25265 () | 20196..23183 | - | 2988 | WP_076706318.1 | type I restriction endonuclease subunit R | - |
| Ga0080574_RS25270 () | 23180..23725 | - | 546 | WP_156876486.1 | hypothetical protein | - |
| Ga0080574_RS25275 () | 23722..24246 | - | 525 | WP_076706320.1 | hypothetical protein | - |
| Ga0080574_RS25280 () | 24246..25328 | - | 1083 | WP_076706321.1 | restriction endonuclease | - |
| Ga0080574_RS26365 () | 25325..26605 | - | 1281 | WP_083717010.1 | restriction endonuclease subunit S | - |
| Ga0080574_RS25295 () | 26602..28617 | - | 2016 | WP_076706322.1 | type I restriction-modification system subunit M | - |
| Ga0080574_RS25300 () | 28618..28917 | - | 300 | WP_076706323.1 | HigA family addiction module antidote protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|