NZ_CP0150901..188936

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 188936 bp
Accession: NZ_CP015090        Location: 1..188936         Organism: Pelagibaca abyssi strain JLT2014       Replicon: plasmid pPABY2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
Ga0080574_RS00680 () 1309..2064 - 756 WP_076694166.1 Cyclopentanol dehydrogenase VF
Ga0080574_RS00685 () 2061..2990 - 930 WP_076694168.1 aminotransferase class IV -
Ga0080574_RS00690 () 3014..4039 - 1026 WP_076694537.1 histone deacetylase family protein -
Ga0080574_RS26135 () 4568..4963 + 396 WP_076694170.1 RidA family protein -
Ga0080574_RS00700 () 4960..6378 + 1419 WP_083716696.1 6-aminohexanoate-cyclic-dimer hydrolase VF
Ga0080574_RS00705 () 6382..7185 + 804 WP_076694174.1 hypothetical protein -
Ga0080574_RS00710 () 7279..9471 + 2193 WP_076694176.1 MFS transporter -
Ga0080574_RS00715 () 9483..10721 + 1239 WP_076694178.1 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase -
Ga0080574_RS25725 () 10764..11006 + 243 WP_156876223.1 hypothetical protein -
Ga0080574_RS00720 () 11222..11908 - 687 WP_076694180.1 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB VF
Ga0080574_RS00725 () 12072..13073 + 1002 WP_076694182.1 ABC transporter substrate-binding protein -
Ga0080574_RS00730 () 13070..13882 + 813 WP_076694184.1 Bicarbonate transport ATP-binding protein CmpC VF
Ga0080574_RS00735 () 13875..14705 + 831 WP_076694186.1 ABC transporter permease -
Ga0080574_RS00740 () 14782..15501 + 720 WP_156876230.1 sulfite exporter TauE/SafE family protein -
Ga0080574_RS00745 () 15486..16169 - 684 WP_076694191.1 GntR family transcriptional regulator -
Ga0080574_RS00755 () 16667..17347 - 681 WP_083716697.1 AroM family protein -
Ga0080574_RS00760 () 17344..18900 - 1557 WP_076694195.1 hydantoinase/oxoprolinase family protein -
Ga0080574_RS00765 () 18897..20018 - 1122 WP_076694197.1 DUF917 domain-containing protein -
Ga0080574_RS00770 () 20405..21982 + 1578 WP_076694199.1 ABC transporter substrate-binding protein -
Ga0080574_RS00775 () 22076..23086 + 1011 WP_076694543.1 ABC transporter permease -
Ga0080574_RS00780 () 23097..23993 + 897 WP_076694201.1 ABC transporter permease -
Ga0080574_RS00785 () 23998..24996 + 999 WP_076694203.1 Oligopeptide transport ATP-binding protein OppD VF
Ga0080574_RS00790 () 25010..25969 + 960 WP_076694546.1 Oligopeptide transport ATP-binding protein OppF VF
Ga0080574_RS00795 () 25966..26919 + 954 WP_076694205.1 LysR family transcriptional regulator -
Ga0080574_RS00800 () 27428..28459 + 1032 WP_076694207.1 LacI family transcriptional regulator -
Ga0080574_RS00805 () 28548..29852 + 1305 WP_076694210.1 sugar ABC transporter substrate-binding protein -
Ga0080574_RS00810 () 29956..30822 + 867 WP_076694212.1 sugar ABC transporter permease -
Ga0080574_RS00815 () 30833..31663 + 831 WP_076694213.1 carbohydrate ABC transporter permease -
Ga0080574_RS00820 () 31676..32677 + 1002 WP_076694215.1 Maltose/maltodextrin import ATP-binding protein MalK VF
Ga0080574_RS00825 () 32714..34207 + 1494 WP_076694217.1 mannitol dehydrogenase family protein -
Ga0080574_RS00830 () 34263..35441 - 1179 WP_076694219.1 4-hydroxybenzoate 3-monooxygenase -
Ga0080574_RS00835 () 35530..36384 + 855 WP_076694549.1 helix-turn-helix domain-containing protein -
Ga0080574_RS00840 () 36398..36841 - 444 WP_076694220.1 acyl-CoA thioesterase -
Ga0080574_RS00845 () 36864..37790 - 927 WP_076694222.1 FAD-binding protein -
Ga0080574_RS00850 () 37790..38548 - 759 WP_076694224.1 electron transfer flavoprotein subunit beta/FixA family protein -
Ga0080574_RS00855 () 38563..39750 - 1188 WP_076694226.1 Acyl-CoA dehydrogenase VF
Ga0080574_RS00860 () 39767..40972 - 1206 WP_076694228.1 3-oxoadipyl-CoA thiolase -
Ga0080574_RS00865 () 40976..43042 - 2067 WP_076694230.1 enoyl-CoA hydratase/isomerase family protein -
Ga0080574_RS00870 () 43055..43807 - 753 WP_076694232.1 SDR family oxidoreductase -
Ga0080574_RS00875 () 43804..45453 - 1650 WP_076694234.1 Medium-chain fatty-acid--CoA ligase VF
Ga0080574_RS00880 () 45529..46704 - 1176 WP_198039712.1 cyclohexanecarboxyl-CoA dehydrogenase -
Ga0080574_RS00885 () 46745..47527 - 783 WP_076694239.1 2-ketocyclohexanecarboxyl-CoA hydrolase -
Ga0080574_RS00890 () 47541..48308 - 768 WP_198039713.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
Ga0080574_RS00895 () 48525..49028 + 504 WP_076694241.1 MarR family transcriptional regulator -
Ga0080574_RS00900 () 49023..50189 - 1167 WP_076694243.1 Acryloyl-CoA reductase (NADH) VF
Ga0080574_RS00905 () 50592..51368 + 777 WP_076694554.1 enoyl-CoA hydratase/isomerase family protein -
Ga0080574_RS00910 () 51772..52848 + 1077 WP_076694245.1 TRAP transporter substrate-binding protein DctP -
Ga0080574_RS00915 () 52909..53469 + 561 WP_076694247.1 TRAP transporter small permease -
Ga0080574_RS00920 () 53480..54778 + 1299 WP_076694249.1 TRAP transporter large permease -
Ga0080574_RS00925 () 54781..55554 + 774 WP_076694251.1 Dihydroanticapsin 7-dehydrogenase VF
Ga0080574_RS00930 () 55551..56129 - 579 WP_076694253.1 NIPSNAP family protein -
Ga0080574_RS00935 () 56226..57137 - 912 WP_076694255.1 helix-turn-helix domain-containing protein -
Ga0080574_RS00940 () 57314..59011 + 1698 WP_076694257.1 FAD-dependent oxidoreductase -
Ga0080574_RS00945 () 59023..59811 + 789 WP_156876225.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
Ga0080574_RS00950 () 59934..61715 + 1782 WP_076694262.1 SLC13 family permease -
Ga0080574_RS00955 () 61733..62473 - 741 WP_076694264.1 NAD-dependent glycerol dehydrogenase VF
Ga0080574_RS00960 () 62497..64113 - 1617 WP_076694266.1 FGGY-family carbohydrate kinase -
Ga0080574_RS00965 () 64195..64926 - 732 WP_076694268.1 Ribitol 2-dehydrogenase VF
Ga0080574_RS00970 () 64999..65970 - 972 WP_076694270.1 ribose ABC transporter permease -
Ga0080574_RS00975 () 65960..67462 - 1503 WP_076694272.1 Ribose import ATP-binding protein RbsA VF
Ga0080574_RS00980 () 67532..68446 - 915 WP_076694274.1 ABC transporter substrate-binding protein -
Ga0080574_RS00985 () 68545..69429 - 885 WP_076694276.1 Arabinose operon regulatory protein VF
Ga0080574_RS00990 () 69679..71130 - 1452 WP_076694278.1 xylulokinase -
Ga0080574_RS00995 () 71136..72173 - 1038 WP_076694280.1 NAD(P)-dependent alcohol dehydrogenase -
Ga0080574_RS01000 () 72601..73815 + 1215 WP_076694282.1 Sporulation initiation inhibitor protein Soj VF
Ga0080574_RS01005 () 73812..74819 + 1008 WP_076694284.1 plasmid partitioning protein RepB -
Ga0080574_RS01010 () 74998..76227 + 1230 WP_076694286.1 replication initiation protein -
Ga0080574_RS01015 () 76388..77278 + 891 WP_076694288.1 DUF1403 family protein -
Ga0080574_RS01020 () 77281..77883 + 603 WP_076694290.1 SMC-Scp complex subunit ScpB -
Ga0080574_RS01025 () 77888..78667 - 780 WP_076694292.1 IclR family transcriptional regulator -
Ga0080574_RS01030 () 78664..79068 - 405 WP_076694294.1 acyl-CoA thioesterase -
Ga0080574_RS01035 () 79158..80300 + 1143 WP_076694296.1 FAD-dependent monooxygenase -
Ga0080574_RS01040 () 80415..82025 + 1611 WP_076694557.1 benzoate-CoA ligase family protein -
Ga0080574_RS01045 () 82054..83022 + 969 WP_076694298.1 TAXI family TRAP transporter solute-binding subunit -
Ga0080574_RS01050 () 83106..85025 + 1920 WP_076694300.1 TRAP transporter fused permease subunit -
Ga0080574_RS25570 () 85434..85871 + 438 WP_083716711.1 universal stress protein -
Ga0080574_RS01060 () 86223..87134 + 912 WP_076694304.1 NAD(P)-dependent oxidoreductase -
Ga0080574_RS01065 () 87127..88005 + 879 WP_076694306.1 fumarylacetoacetate hydrolase family protein -
Ga0080574_RS01070 () 88018..88905 + 888 WP_076694308.1 VOC family protein -
Ga0080574_RS01075 () 88942..89403 + 462 WP_076694310.1 cupin domain-containing protein -
Ga0080574_RS01080 () 89427..89786 + 360 WP_198039714.1 nuclear transport factor 2 family protein -
Ga0080574_RS01085 () 89868..90572 - 705 WP_076694314.1 FCD domain-containing protein -
Ga0080574_RS01090 () 90673..91161 - 489 WP_076694316.1 VOC family protein -
Ga0080574_RS01095 () 91186..91938 - 753 WP_076694318.1 Cyclopentanol dehydrogenase VF
Ga0080574_RS01100 () 91998..92741 - 744 WP_076694320.1 (S)-1-Phenylethanol dehydrogenase VF
Ga0080574_RS01105 () 93074..93910 - 837 WP_076694322.1 hypothetical protein -
Ga0080574_RS01110 () 93907..96888 - 2982 WP_076694324.1 molybdopterin-dependent oxidoreductase -
Ga0080574_RS01115 () 97180..97857 + 678 WP_076694326.1 TetR/AcrR family transcriptional regulator -
Ga0080574_RS01120 () 98011..98589 + 579 WP_076694328.1 HTH-type transcriptional repressor ComR VF
Ga0080574_RS01125 () 98705..99322 + 618 WP_076694330.1 isochorismatase family protein -
Ga0080574_RS01130 () 99495..100673 + 1179 WP_076694332.1 acyl-CoA dehydrogenase family protein -
Ga0080574_RS01135 () 100684..101325 - 642 WP_076694334.1 TetR/AcrR family transcriptional regulator -
Ga0080574_RS01140 () 101457..101951 + 495 WP_076694336.1 flavin reductase family protein -
Ga0080574_RS01145 () 102290..103420 + 1131 WP_076694339.1 outer membrane protein transport protein -
Ga0080574_RS01150 () 103487..104155 + 669 WP_076694341.1 dienelactone hydrolase family protein -
Ga0080574_RS01155 () 104398..105354 - 957 WP_076694343.1 fumarylacetoacetate hydrolase family protein -
Ga0080574_RS01160 () 105351..105785 - 435 WP_076694345.1 nuclear transport factor 2 family protein -
Ga0080574_RS01165 () 105960..106427 - 468 WP_076694560.1 (2Fe-2S)-binding protein -
Ga0080574_RS01170 () 106441..108729 - 2289 WP_076694347.1 xanthine dehydrogenase family protein molybdopterin-binding subunit -
Ga0080574_RS01175 () 108738..109601 - 864 WP_076694349.1 xanthine dehydrogenase family protein subunit M -
Ga0080574_RS01180 () 109598..110065 - 468 WP_076694352.1 hypothetical protein -
Ga0080574_RS01185 () 110558..111289 - 732 WP_076694354.1 dienelactone hydrolase family protein -
Ga0080574_RS01190 () 111459..111872 - 414 WP_083716712.1 VOC family protein -
Ga0080574_RS01195 () 112031..112342 - 312 WP_076694358.1 antibiotic biosynthesis monooxygenase -
Ga0080574_RS01200 () 112368..113402 - 1035 WP_076694360.1 CDP-6-deoxy-delta-3,4-glucoseen reductase -
Ga0080574_RS01205 () 113515..114462 + 948 WP_076694362.1 Glycine cleavage system transcriptional activator VF
Ga0080574_RS01210 () 114515..115417 - 903 WP_076694364.1 LysR family transcriptional regulator -
Ga0080574_RS01215 () 115537..115818 + 282 WP_076694366.1 (2Fe-2S)-binding protein -
Ga0080574_RS01220 () 115815..117194 + 1380 WP_076694368.1 NAD(P)/FAD-dependent oxidoreductase -
Ga0080574_RS01225 () 117301..117645 + 345 WP_076694370.1 RidA family protein -
Ga0080574_RS01230 () 117861..119579 - 1719 Protein_111 hydantoinase B/oxoprolinase family protein -
Ga0080574_RS01235 () 119583..121607 - 2025 WP_076694372.1 hydantoinase/oxoprolinase family protein -
Ga0080574_RS01240 () 121633..122922 - 1290 WP_076694374.1 TRAP transporter large permease -
Ga0080574_RS01245 () 122919..123416 - 498 WP_076694376.1 TRAP transporter small permease subunit -
Ga0080574_RS01250 () 123487..124479 - 993 WP_076694378.1 TRAP transporter substrate-binding protein -
Ga0080574_RS01255 () 124500..125612 - 1113 WP_076694563.1 FAD-binding oxidoreductase -
Ga0080574_RS01260 () 126109..127446 + 1338 WP_076694380.1 LLM class flavin-dependent oxidoreductase -
Ga0080574_RS01265 () 127505..129103 + 1599 WP_076694381.1 ABC transporter substrate-binding protein -
Ga0080574_RS01270 () 129100..130125 + 1026 WP_083716703.1 ABC transporter permease -
Ga0080574_RS01275 () 130122..130961 + 840 WP_076694384.1 ABC transporter permease -
Ga0080574_RS01280 () 130927..131946 + 1020 WP_076694386.1 Oligopeptide transport ATP-binding protein OppD VF
Ga0080574_RS01285 () 131943..132932 + 990 WP_076694388.1 putative D,D-dipeptide transport ATP-binding protein DdpF VF
Ga0080574_RS01290 () 132949..135258 + 2310 WP_076694390.1 molybdopterin-dependent oxidoreductase -
Ga0080574_RS01295 () 135366..136313 + 948 WP_076694392.1 LysR family transcriptional regulator -
Ga0080574_RS01300 () 136320..137501 - 1182 WP_076694394.1 cystathionine beta-lyase -
Ga0080574_RS01305 () 137503..138351 - 849 WP_076694397.1 sulfurtransferase -
Ga0080574_RS01310 () 138348..139091 - 744 WP_076694399.1 VOC family protein -
Ga0080574_RS01315 () 139105..140433 - 1329 WP_076694401.1 FAD-binding oxidoreductase -
Ga0080574_RS01320 () 140487..142427 - 1941 WP_076694404.1 hydantoinase B/oxoprolinase family protein -
Ga0080574_RS01325 () 142429..144450 - 2022 WP_076694407.1 hydantoinase/oxoprolinase family protein -
Ga0080574_RS01330 () 144723..146039 - 1317 WP_076694409.1 amidase -
Ga0080574_RS01335 () 146036..146965 - 930 WP_076694412.1 polysaccharide deacetylase family protein -
Ga0080574_RS01340 () 146962..147900 - 939 WP_076694568.1 polysaccharide deacetylase family protein -
Ga0080574_RS01345 () 147927..148556 - 630 WP_076694571.1 isochorismatase family protein -
Ga0080574_RS01350 () 148875..149768 + 894 WP_076694415.1 HTH-type transcriptional regulator DmlR VF
Ga0080574_RS01355 () 149772..151112 - 1341 WP_076694417.1 amidase -
Ga0080574_RS26140 () 151109..151306 - 198 WP_076694420.1 hypothetical protein -
Ga0080574_RS01365 () 151544..152596 + 1053 WP_076694423.1 quinolinate synthase NadA -
Ga0080574_RS01370 () 152601..154163 + 1563 WP_076694426.1 L-aspartate oxidase -
Ga0080574_RS01375 () 154163..155011 + 849 WP_076694429.1 carboxylating nicotinate-nucleotide diphosphorylase -
Ga0080574_RS01380 () 155086..155328 + 243 WP_076694432.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
Ga0080574_RS01385 () 155325..155732 + 408 WP_076694435.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
Ga0080574_RS01390 () 155757..156377 - 621 WP_076694438.1 hypothetical protein -
Ga0080574_RS01395 () 156544..157671 + 1128 WP_076694440.1 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase -
Ga0080574_RS01400 () 157675..158499 + 825 WP_076694443.1 S-formylglutathione hydrolase -
Ga0080574_RS01405 () 158531..158944 + 414 WP_076694446.1 cytochrome c family protein -
Ga0080574_RS01410 () 159063..160865 + 1803 WP_076694449.1 methanol/ethanol family PQQ-dependent dehydrogenase -
Ga0080574_RS01415 () 160945..161472 + 528 WP_076694452.1 c-type cytochrome, methanol metabolism-related -
Ga0080574_RS01420 () 161453..162295 + 843 WP_076694455.1 substrate-binding domain-containing protein -
Ga0080574_RS01425 () 162319..162837 + 519 WP_156876232.1 PQQ-dependent catabolism-associated CXXCW motif protein -
Ga0080574_RS01430 () 162987..163787 - 801 WP_076694464.1 quinoprotein dehydrogenase-associated SoxYZ-like carrier -
Ga0080574_RS01435 () 163784..164659 - 876 WP_156876234.1 YncE family protein -
Ga0080574_RS01440 () 164712..165263 - 552 WP_076694469.1 SRPBCC family protein -
Ga0080574_RS01445 () 165260..165751 - 492 WP_076694471.1 DUF3280 domain-containing protein -
Ga0080574_RS01450 () 165881..167104 + 1224 WP_083716707.1 ABC transporter substrate-binding protein -
Ga0080574_RS01455 () 167114..168085 + 972 WP_076694477.1 YVTN family beta-propeller repeat protein -
Ga0080574_RS01460 () 168140..169108 + 969 WP_076694479.1 ABC transporter substrate-binding protein -
Ga0080574_RS01465 () 169105..169773 + 669 WP_083716708.1 Aliphatic sulfonates import ATP-binding protein SsuB VF
Ga0080574_RS01470 () 169788..170216 + 429 WP_076694482.1 hypothetical protein -
Ga0080574_RS01475 () 170227..171342 - 1116 WP_076694485.1 NAD(P)/FAD-dependent oxidoreductase -
Ga0080574_RS01480 () 171394..172398 - 1005 WP_076694576.1 quinoprotein relay system zinc metallohydrolase 2 -
Ga0080574_RS01485 () 172524..173330 + 807 WP_083716709.1 quinoprotein dehydrogenase-associated SoxYZ-like carrier -
Ga0080574_RS01490 () 173358..173711 - 354 WP_076694488.1 hypothetical protein -
Ga0080574_RS01495 () 173708..174376 - 669 WP_076694491.1 hypothetical protein -
Ga0080574_RS01500 () 174595..176829 - 2235 WP_076694494.1 PAS-domain containing protein -
Ga0080574_RS01505 () 176826..177983 - 1158 WP_076694497.1 FIST C-terminal domain-containing protein -
Ga0080574_RS01510 () 177988..178710 - 723 WP_076694500.1 response regulator transcription factor -
Ga0080574_RS01515 () 178833..179459 - 627 WP_083716710.1 S-(hydroxymethyl)glutathione synthase -
Ga0080574_RS26145 () 179672..180316 - 645 WP_076694503.1 hypothetical protein -
Ga0080574_RS01525 () 180449..181558 - 1110 WP_076694506.1 pyrroloquinoline quinone biosynthesis protein PqqE -
Ga0080574_RS01530 () 181656..181928 - 273 WP_076694509.1 pyrroloquinoline quinone biosynthesis peptide chaperone PqqD -
Ga0080574_RS01535 () 181928..182677 - 750 WP_076694512.1 pyrroloquinoline-quinone synthase PqqC -
Ga0080574_RS01540 () 182674..183570 - 897 WP_076694515.1 pyrroloquinoline quinone biosynthesis protein PqqB -
Ga0080574_RS01545 () 183594..183686 - 93 WP_076694518.1 pyrroloquinoline quinone precursor peptide PqqA -
Ga0080574_RS01550 () 183846..184520 - 675 WP_076694521.1 GntR family transcriptional regulator -
Ga0080574_RS01555 () 184558..185103 - 546 WP_076694523.1 VOC family protein -
Ga0080574_RS01560 () 185100..186740 - 1641 WP_076694525.1 Glutathione import ATP-binding protein GsiA VF
Ga0080574_RS01565 () 186737..187567 - 831 WP_076694528.1 ABC transporter permease -
Ga0080574_RS01570 () 187573..188553 - 981 WP_076694531.1 ABC transporter permease -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance