MGE detailed information
MGE type: Prophage MGE length: 61423 bp
Accession: NZ_CP015074 Location: 3053600..3115022 Organism: Escherichia coli strain Ecol_745 Replicon: chromosome
Accession: NZ_CP015074 Location: 3053600..3115022 Organism: Escherichia coli strain Ecol_745 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4R38_RS14935 () | 3049497..3050717 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| A4R38_RS14940 () | 3050842..3051537 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| A4R38_RS14945 () | 3051490..3052782 | - | 1293 | WP_001296088.1 | voltage-gated ClC-type chloride channel ClcB | - |
| A4R38_RS14950 () | 3052943..3053557 | - | 615 | WP_000148693.1 | Tat proofreading chaperone DmsD | - |
| A4R38_RS14955 () | 3053600..3054454 | - | 855 | WP_000526467.1 | dimethyl sulfoxide reductase anchor subunit | - |
| A4R38_RS14960 () | 3054456..3055073 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| A4R38_RS28005 () | 3055084..3056653 | - | 1570 | Protein_2825 | molybdopterin-dependent oxidoreductase | - |
| A4R38_RS14970 () | 3056714..3059140 | - | 2427 | WP_000041660.1 | dimethyl sulfoxide reductase subunit A | - |
| A4R38_RS14975 () | 3059339..3059644 | - | 306 | WP_001296085.1 | DUF1161 domain-containing protein | - |
| A4R38_RS14980 () | 3059752..3060462 | + | 711 | WP_001296084.1 | YnfC family lipoprotein | - |
| A4R38_RS14985 () | 3060465..3061025 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| A4R38_RS14990 () | 3061060..3061401 | - | 342 | WP_000705204.1 | DUF1283 family protein | - |
| A4R38_RS14995 () | 3061536..3061862 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| A4R38_RS15000 () | 3062068..3063282 | + | 1215 | WP_001296083.1 | starvation-sensing protein RspA | - |
| A4R38_RS15005 () | 3063294..3064313 | + | 1020 | WP_000836081.1 | Zn-dependent oxidoreductase | - |
| A4R38_RS27200 () | 3064371..3064499 | + | 129 | WP_001389342.1 | hypothetical protein | - |
| A4R38_RS15010 () | 3064501..3065781 | - | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| A4R38_RS15015 () | 3065816..3066067 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| A4R38_RS15020 () | 3066140..3068611 | - | 2472 | WP_063131870.1 | exonuclease | - |
| A4R38_RS15025 () | 3068705..3068896 | - | 192 | WP_001083276.1 | lysis protein YdfD | - |
| A4R38_RS15030 () | 3068893..3069081 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| A4R38_RS15035 () | 3069568..3070143 | - | 576 | WP_000344950.1 | hypothetical protein | - |
| A4R38_RS15040 () | 3070145..3070300 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| A4R38_RS15045 () | 3070469..3070876 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| A4R38_RS15050 () | 3070957..3071184 | + | 228 | WP_000921596.1 | transcriptional regulator | - |
| A4R38_RS15055 () | 3071168..3071689 | + | 522 | WP_000705355.1 | hypothetical protein | - |
| A4R38_RS15060 () | 3071670..3072635 | + | 966 | WP_000054487.1 | hypothetical protein | - |
| A4R38_RS15065 () | 3072676..3073074 | + | 399 | WP_001151242.1 | DUF977 family protein | - |
| A4R38_RS15070 () | 3073277..3073942 | + | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| A4R38_RS15075 () | 3074151..3074765 | + | 615 | WP_001265627.1 | hypothetical protein | - |
| A4R38_RS15080 () | 3074762..3075790 | + | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| A4R38_RS15085 () | 3076274..3077587 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| A4R38_RS15090 () | 3078024..3078356 | - | 333 | WP_001301033.1 | protein FlxA | - |
| A4R38_RS26220 () | 3078559..3078864 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| A4R38_RS15095 () | 3078889..3079128 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| A4R38_RS15100 () | 3079128..3079415 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| A4R38_RS15105 () | 3079487..3079642 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| A4R38_RS15110 () | 3079859..3080110 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| A4R38_RS15115 () | 3080177..3080455 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| A4R38_RS15120 () | 3080457..3081506 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| A4R38_RS15125 () | 3081520..3082272 | + | 753 | WP_001047135.1 | antitermination protein | - |
| A4R38_RS27720 () | 3082550..3082639 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| A4R38_RS15130 () | 3082694..3082906 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| A4R38_RS15135 () | 3083207..3083422 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| A4R38_RS28255 () | 3083786..3083956 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| A4R38_RS15140 () | 3084176..3084391 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| A4R38_RS15145 () | 3084396..3084707 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| A4R38_RS15150 () | 3084704..3085237 | + | 534 | WP_001092971.1 | lysozyme | - |
| A4R38_RS15155 () | 3085234..3085731 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| A4R38_RS15160 () | 3086094..3086306 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| A4R38_RS26225 () | 3086317..3086505 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| A4R38_RS27725 () | 3086508..3086573 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| A4R38_RS15165 () | 3086653..3086808 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| A4R38_RS15170 () | 3086980..3087153 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| A4R38_RS15175 () | 3087305..3087715 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| A4R38_RS15180 () | 3087773..3088006 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| A4R38_RS15185 () | 3088395..3088940 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| A4R38_RS15190 () | 3088915..3090840 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| A4R38_RS15195 () | 3090837..3091043 | + | 207 | WP_000198149.1 | gpW family protein | - |
| A4R38_RS15200 () | 3091040..3092641 | + | 1602 | WP_001356819.1 | phage portal protein | - |
| A4R38_RS15205 () | 3092622..3093941 | + | 1320 | WP_020233915.1 | S49 family peptidase | - |
| A4R38_RS15210 () | 3093951..3094283 | + | 333 | WP_001708751.1 | head decoration protein | - |
| A4R38_RS15215 () | 3094338..3095363 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| A4R38_RS15220 () | 3095405..3095803 | + | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| A4R38_RS15225 () | 3095815..3096168 | + | 354 | WP_000752979.1 | head-tail joining protein | - |
| A4R38_RS15230 () | 3096180..3096758 | + | 579 | WP_000975070.1 | phage tail protein | - |
| A4R38_RS15235 () | 3096755..3097150 | + | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| A4R38_RS15240 () | 3097158..3097898 | + | 741 | WP_001349920.1 | phage tail protein | - |
| A4R38_RS15245 () | 3097914..3098336 | + | 423 | WP_000479153.1 | phage minor tail protein G | - |
| A4R38_RS15250 () | 3098318..3098752 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| A4R38_RS15255 () | 3098745..3101306 | + | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| A4R38_RS15260 () | 3101303..3101632 | + | 330 | WP_000847345.1 | phage tail protein | - |
| A4R38_RS15265 () | 3101632..3102330 | + | 699 | WP_001551186.1 | phage minor tail protein L | - |
| A4R38_RS15270 () | 3102336..3103079 | + | 744 | WP_032153655.1 | C40 family peptidase | - |
| A4R38_RS15275 () | 3103016..3103618 | + | 603 | WP_049286672.1 | tail assembly protein | - |
| A4R38_RS15280 () | 3103679..3107158 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| A4R38_RS15285 () | 3107226..3107825 | + | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| A4R38_RS15290 () | 3107890..3110289 | + | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| A4R38_RS15295 () | 3110286..3110567 | + | 282 | WP_061092145.1 | hypothetical protein | - |
| A4R38_RS28165 () | 3110577..3111281 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| A4R38_RS15305 () | 3111292..3111585 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| A4R38_RS26230 () | 3111605..3111715 | + | 111 | Protein_2900 | tail fiber assembly protein | - |
| A4R38_RS15310 () | 3111813..3112403 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| A4R38_RS15315 () | 3112720..3112953 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| A4R38_RS27730 () | 3113022..3113135 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| A4R38_RS15320 () | 3113739..3115022 | + | 1284 | Protein_2904 | MHS family MFS transporter YdfJ | - |
| A4R38_RS15325 () | 3115111..3116571 | + | 1461 | WP_000526709.1 | mannitol dehydrogenase family protein | - |
| A4R38_RS15330 () | 3116607..3116810 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| A4R38_RS15335 () | 3116987..3117673 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| A4R38_RS15340 () | 3117762..3118508 | - | 747 | WP_001296081.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|