MGE detailed information
MGE type: Conjugative plasmid MGE length: 65196 bp
Accession: NZ_CP015072 Location: 1..65196 Organism: Escherichia coli strain Ecol_743 Replicon: plasmid pEC743_3
Accession: NZ_CP015072 Location: 1..65196 Organism: Escherichia coli strain Ecol_743 Replicon: plasmid pEC743_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4R39_RS24915 () | 1..684 | - | 684 | WP_000085883.1 | DNA methylase | - |
| A4R39_RS28180 () | 761..1048 | - | 288 | WP_033558500.1 | hypothetical protein | - |
| A4R39_RS24925 () | 1200..2160 | + | 961 | Protein_2 | plasmid segregation protein ParM | - |
| A4R39_RS24930 () | 2163..2498 | + | 336 | WP_063131969.1 | plasmid partitioning/stability family protein | - |
| A4R39_RS24935 () | 2635..2916 | - | 282 | WP_001333089.1 | hypothetical protein | - |
| A4R39_RS24945 () | 3044..3278 | - | 235 | Protein_5 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| A4R39_RS28880 () | 4727..4792 | - | 66 | Protein_6 | IS1 family transposase | - |
| A4R39_RS24955 () | 4858..5562 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| A4R39_RS24960 () | 5628..6173 | + | 546 | Protein_8 | Tn3 family transposase TnpA_Tn3 | Transposase |
| A4R39_RS24965 () | 6209..6624 | - | 416 | Protein_9 | IS1 family transposase IS1R | Transposase |
| A4R39_RS24970 () | 6873..7274 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| A4R39_RS28740 () | 7207..7464 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| A4R39_RS24980 () | 7557..8210 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| A4R39_RS24985 () | 9149..10006 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| A4R39_RS24990 () | 9999..10073 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| A4R39_RS24995 () | 10311..10565 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| A4R39_RS25000 () | 10805..11395 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| A4R39_RS25005 () | 11433..11642 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| A4R39_RS25010 () | 11688..12149 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| A4R39_RS25015 () | 12394..12606 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| A4R39_RS25020 () | 12735..13295 | - | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| A4R39_RS25025 () | 13398..14258 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| A4R39_RS25030 () | 14317..15063 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| A4R39_RS25035 () | 15083..20352 | - | 5270 | Protein_23 | Multifunctional conjugation protein TraI | Relaxase |
| A4R39_RS25040 () | 20352..22577 | - | 2226 | WP_011867779.1 | type IV conjugative transfer system coupling protein TraD | - |
| A4R39_RS25045 () | 22628..23365 | - | 738 | WP_000199905.1 | hypothetical protein | - |
| A4R39_RS25050 () | 23568..24299 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| A4R39_RS25055 () | 24348..24833 | - | 486 | WP_000605870.1 | hypothetical protein | - |
| A4R39_RS25060 () | 24849..27671 | - | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| A4R39_RS25065 () | 27668..29041 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| A4R39_RS25070 () | 29028..29453 | - | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| A4R39_RS25075 () | 29401..29748 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| A4R39_RS25080 () | 29678..30223 | - | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| A4R39_RS25085 () | 30210..30494 | - | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| A4R39_RS25090 () | 30613..30957 | - | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| A4R39_RS25095 () | 30971..31714 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| A4R39_RS25100 () | 31707..31964 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| A4R39_RS25105 () | 31991..33841 | - | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| A4R39_RS25110 () | 33838..34476 | - | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| A4R39_RS25115 () | 34485..34790 | - | 306 | WP_000224416.1 | hypothetical protein | - |
| A4R39_RS25120 () | 34820..35812 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| A4R39_RS25125 () | 35809..36441 | - | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| A4R39_RS25130 () | 36438..36824 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| A4R39_RS25135 () | 36821..39451 | - | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| A4R39_RS28745 () | 39577..39924 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| A4R39_RS25145 () | 39952..40170 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| A4R39_RS25150 () | 40250..40726 | - | 477 | WP_000549587.1 | hypothetical protein | - |
| A4R39_RS27470 () | 40719..40940 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| A4R39_RS25155 () | 41075..41590 | - | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| A4R39_RS25160 () | 41587..41955 | - | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| A4R39_RS25165 () | 41894..42481 | - | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| A4R39_RS25170 () | 42450..43901 | - | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| A4R39_RS25175 () | 43901..44629 | - | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| A4R39_RS25180 () | 44616..45182 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| A4R39_RS25185 () | 45204..45515 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| A4R39_RS25190 () | 45530..45889 | - | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| A4R39_RS25195 () | 45922..46149 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| A4R39_RS25200 () | 46286..46957 | - | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| A4R39_RS25205 () | 47151..47534 | - | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| A4R39_RS25210 () | 47857..48459 | + | 603 | WP_000243713.1 | hypothetical protein | VF |
| A4R39_RS25215 () | 48756..49577 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| A4R39_RS25220 () | 49688..49984 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| A4R39_RS28975 () | 50284..50661 | + | 378 | Protein_62 | hypothetical protein | - |
| A4R39_RS27485 () | 50899..51057 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 51101..51325 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 51101..51325 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 51101..51325 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 51101..51325 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| A4R39_RS28890 () | 51137..51316 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| A4R39_RS25235 () | 51337..52056 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| A4R39_RS25240 () | 52053..52487 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| A4R39_RS25245 () | 52556..54520 | - | 1965 | WP_063131970.1 | ParB/RepB/Spo0J family partition protein | - |
| A4R39_RS25250 () | 54581..54814 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| A4R39_RS25255 () | 54872..55357 | - | 486 | WP_031311812.1 | single-stranded DNA-binding protein | - |
| A4R39_RS25260 () | 55507..57408 | - | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| A4R39_RS25270 () | 58909..59472 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| A4R39_RS25275 () | 59519..60880 | - | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| A4R39_RS25280 () | 60932..61162 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| A4R39_RS25285 () | 62200..62391 | - | 192 | WP_001027493.1 | hypothetical protein | - |
| A4R39_RS25290 () | 62388..62810 | - | 423 | WP_000271762.1 | DUF1380 family protein | - |
| A4R39_RS25295 () | 62857..63159 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| A4R39_RS28895 () | 63700..64476 | - | 777 | WP_001383963.1 | hypothetical protein | - |
| A4R39_RS25310 () | 64527..64961 | - | 435 | WP_000274503.1 | DUF1380 family protein | - |
| A4R39_RS25315 () | 64975..65196 | - | 222 | WP_001104881.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|