MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 43058 bp
Accession: NZ_CP015039 Location: 2714661..2757718 Organism: Rhodovulum sp. P5 Replicon: chromosome
Accession: NZ_CP015039 Location: 2714661..2757718 Organism: Rhodovulum sp. P5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RGUI_RS13140 () | 2714340..2715662 | + | 1323 | WP_081533629.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| RGUI_RS13145 () | 2715870..2717036 | - | 1167 | WP_156882962.1 | hypothetical protein | - |
| RGUI_RS13150 () | 2717033..2717701 | - | 669 | WP_156882963.1 | hypothetical protein | - |
| RGUI_RS13155 () | 2717698..2719329 | - | 1632 | WP_081533635.1 | adenylosuccinate synthetase | - |
| RGUI_RS13160 () | 2719330..2720586 | - | 1257 | WP_172841146.1 | macro domain-containing protein | - |
| RGUI_RS13165 () | 2720791..2721360 | - | 570 | WP_081533639.1 | PIN domain-containing protein | Toxin Detail |
| RGUI_RS13170 () | 2721364..2721822 | - | 459 | WP_081533641.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| RGUI_RS13175 () | 2722002..2725304 | - | 3303 | WP_081533643.1 | DEAD/DEAH box helicase | - |
| RGUI_RS13180 () | 2725297..2726085 | - | 789 | WP_081533645.1 | hypothetical protein | - |
| RGUI_RS13185 () | 2726110..2727339 | - | 1230 | WP_081533647.1 | type II toxin-antitoxin system HipA family toxin | - |
| RGUI_RS13190 () | 2727339..2727650 | - | 312 | WP_172841147.1 | helix-turn-helix transcriptional regulator | - |
| RGUI_RS13195 () | 2728307..2729500 | + | 1194 | WP_081533651.1 | DUF932 domain-containing protein | - |
| RGUI_RS13200 () | 2729637..2731685 | + | 2049 | WP_081533653.1 | ParB/RepB/Spo0J family partition protein | - |
| RGUI_RS13205 () | 2731760..2732251 | + | 492 | WP_081533655.1 | hypothetical protein | - |
| RGUI_RS13210 () | 2732263..2732667 | + | 405 | WP_081533657.1 | hypothetical protein | - |
| RGUI_RS13215 () | 2732843..2733889 | + | 1047 | WP_081533659.1 | toprim domain-containing protein | - |
| RGUI_RS13220 () | 2734237..2735163 | + | 927 | WP_081533661.1 | DUF2493 domain-containing protein | - |
| RGUI_RS13225 () | 2735288..2735692 | + | 405 | Protein_2624 | hypothetical protein | - |
| RGUI_RS13230 () | 2736326..2736661 | + | 336 | WP_081533665.1 | DUF736 domain-containing protein | - |
| RGUI_RS13235 () | 2736763..2737677 | - | 915 | WP_081533667.1 | EamA family transporter | - |
| RGUI_RS13240 () | 2737674..2738021 | - | 348 | WP_081533669.1 | antibiotic biosynthesis monooxygenase | - |
| RGUI_RS13245 () | 2738018..2738341 | - | 324 | WP_081533671.1 | NIPSNAP family protein | - |
| RGUI_RS13250 () | 2738415..2739098 | + | 684 | WP_081533673.1 | winged helix-turn-helix domain-containing protein | - |
| RGUI_RS13255 () | 2739188..2739412 | - | 225 | WP_081533675.1 | helix-turn-helix domain-containing protein | - |
| RGUI_RS13260 () | 2739590..2739856 | + | 267 | WP_081536088.1 | DUF2285 domain-containing protein | - |
| RGUI_RS21275 () | 2739999..2740169 | + | 171 | WP_156882964.1 | hypothetical protein | - |
| RGUI_RS13265 () | 2740222..2740713 | + | 492 | WP_156882965.1 | DUF2285 domain-containing protein | - |
| RGUI_RS13270 () | 2740758..2741588 | + | 831 | WP_156882966.1 | hypothetical protein | - |
| RGUI_RS13275 () | 2741766..2742050 | + | 285 | WP_081533681.1 | helix-turn-helix domain-containing protein | - |
| RGUI_RS13280 () | 2742047..2742511 | + | 465 | WP_081533682.1 | DUF2840 domain-containing protein | - |
| RGUI_RS13285 () | 2742508..2743020 | + | 513 | WP_081533684.1 | S26 family signal peptidase | - |
| RGUI_RS13290 () | 2743025..2743774 | + | 750 | WP_081533686.1 | lytic transglycosylase domain-containing protein | - |
| RGUI_RS21280 () | 2743771..2744025 | + | 255 | WP_156882967.1 | hypothetical protein | - |
| RGUI_RS13295 () | 2744022..2745776 | + | 1755 | WP_081533688.1 | VirD2 family relaxase/mobilization nuclease | - |
| RGUI_RS13300 () | 2745790..2747784 | + | 1995 | WP_081533690.1 | Conjugal transfer protein TraG | VF |
| RGUI_RS13305 () | 2747794..2748216 | + | 423 | WP_081536089.1 | ribbon-helix-helix domain-containing protein | - |
| RGUI_RS13310 () | 2748352..2749335 | + | 984 | WP_081533692.1 | Type IV secretion system protein PtlH | VF |
| RGUI_RS13315 () | 2749332..2749667 | + | 336 | WP_156882968.1 | TrbC/VirB2 family protein | - |
| RGUI_RS13320 () | 2749664..2749933 | + | 270 | WP_081533694.1 | VirB3 family type IV secretion system protein | - |
| RGUI_RS13325 () | 2749938..2752436 | + | 2499 | WP_081533696.1 | conjugal transfer protein TrbE | - |
| RGUI_RS13330 () | 2752414..2753193 | + | 780 | WP_081533698.1 | P-type conjugative transfer protein TrbJ | - |
| RGUI_RS13335 () | 2753200..2753478 | + | 279 | WP_081533700.1 | putative entry exclusion protein TrbK-alt | - |
| RGUI_RS13340 () | 2753482..2754771 | + | 1290 | WP_081533702.1 | P-type conjugative transfer protein TrbL | - |
| RGUI_RS13345 () | 2754768..2755454 | + | 687 | WP_081533704.1 | conjugal transfer protein TrbF | - |
| RGUI_RS13350 () | 2755451..2756491 | + | 1041 | WP_081533706.1 | P-type conjugative transfer protein TrbG | - |
| RGUI_RS13355 () | 2756495..2757718 | + | 1224 | WP_081533708.1 | Type IV secretion system protein virB10 | VF |
| RGUI_RS13360 () | 2757715..2757960 | + | 246 | WP_081533710.1 | DUF2274 domain-containing protein | - |
| RGUI_RS13365 () | 2757914..2758822 | - | 909 | WP_081533712.1 | LysR family transcriptional regulator | - |
| RGUI_RS13370 () | 2758918..2759268 | - | 351 | WP_172841148.1 | carboxymuconolactone decarboxylase family protein | - |
| RGUI_RS13375 () | 2759298..2760326 | - | 1029 | WP_081533716.1 | aldo/keto reductase | - |
| RGUI_RS13380 () | 2760400..2761338 | + | 939 | WP_081533718.1 | LysR family transcriptional regulator | - |
| RGUI_RS13390 () | 2762036..2762392 | + | 357 | WP_156882969.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|