MGE detailed information
MGE type: Prophage MGE length: 44093 bp
Accession: NZ_CP015020 Location: 4049872..4093964 Organism: Escherichia coli strain 28RC1 Replicon: chromosome
Accession: NZ_CP015020 Location: 4049872..4093964 Organism: Escherichia coli strain 28RC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ARC77_RS20615 () | 4046830..4047408 | + | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| ARC77_RS20620 () | 4047513..4048280 | + | 768 | WP_001301698.1 | class II glutamine amidotransferase | - |
| ARC77_RS20625 () | 4048251..4048991 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| ARC77_RS20630 () | 4049147..4049407 | - | 261 | WP_001303998.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| ARC77_RS20635 () | 4049426..4049686 | - | 261 | WP_000729705.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| ARC77_RS20640 () | 4049872..4050645 | + | 774 | WP_000543891.1 | hypothetical protein | VF |
| ARC77_RS32920 () | 4050821..4051318 | + | 498 | Protein_3891 | REP-associated tyrosine transposase RayT | - |
| ARC77_RS20650 () | 4051463..4053175 | - | 1713 | Protein_3892 | hypothetical protein | VF |
| ARC77_RS20655 () | 4053147..4053932 | + | 786 | WP_000207556.1 | hypothetical protein | VF |
| ARC77_RS20660 () | 4054003..4055058 | + | 1056 | WP_001226186.1 | DNA polymerase IV | - |
| ARC77_RS20665 () | 4055110..4055403 | + | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| ARC77_RS20670 () | 4055406..4055804 | + | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| ARC77_RS20675 () | 4055814..4056266 | + | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| ARC77_RS20680 () | 4056585..4056788 | + | 204 | Protein_3898 | RNA ligase RtcB family protein | - |
| ARC77_RS20685 () | 4056787..4057308 | + | 522 | Protein_3899 | peptide chain release factor H | - |
| ARC77_RS20690 () | 4057365..4058822 | - | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| ARC77_RS20695 () | 4059083..4059541 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| ARC77_RS20700 () | 4059633..4060877 | + | 1245 | WP_000189536.1 | esterase FrsA | - |
| - () | 4060137..4060217 | + | 81 | NuclAT_11 | - | - |
| - () | 4060137..4060217 | + | 81 | NuclAT_11 | - | - |
| - () | 4060137..4060217 | + | 81 | NuclAT_11 | - | - |
| - () | 4060137..4060217 | + | 81 | NuclAT_11 | - | - |
| ARC77_RS20705 () | 4060935..4061336 | + | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
| ARC77_RS20710 () | 4061375..4062430 | - | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| ARC77_RS20715 () | 4062718..4063821 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| ARC77_RS20720 () | 4063833..4065086 | + | 1254 | WP_000893282.1 | glutamate-5-semialdehyde dehydrogenase | - |
| ARC77_RS20730 () | 4065291..4066211 | - | 921 | Protein_3907 | hypothetical protein ; Integrase | Integrase |
| ARC77_RS20735 () | 4066156..4066401 | - | 246 | WP_001303805.1 | transcription antitermination protein | - |
| ARC77_RS20750 () | 4067967..4068350 | - | 384 | WP_062946174.1 | hypothetical protein | - |
| ARC77_RS20755 () | 4068478..4069191 | - | 714 | WP_001274756.1 | LexA family transcriptional regulator | - |
| ARC77_RS20760 () | 4069292..4069492 | + | 201 | WP_000437875.1 | Cro/Cl family transcriptional regulator | - |
| ARC77_RS20765 () | 4069611..4069904 | + | 294 | WP_000251069.1 | lambda phage CII family protein | - |
| ARC77_RS20770 () | 4069937..4070859 | + | 923 | Protein_3914 | replication protein | - |
| ARC77_RS20775 () | 4070856..4071167 | + | 312 | WP_000788819.1 | hypothetical protein | - |
| ARC77_RS20780 () | 4071167..4071961 | + | 795 | WP_001096963.1 | tail fiber protein | - |
| ARC77_RS20785 () | 4071961..4072554 | + | 594 | WP_000805544.1 | tail fiber assembly protein | - |
| ARC77_RS20790 () | 4072526..4072969 | - | 444 | WP_000344820.1 | tail assembly chaperone | - |
| ARC77_RS20795 () | 4072990..4073400 | - | 411 | WP_001115553.1 | tail fiber protein | - |
| ARC77_RS20800 () | 4073430..4073984 | + | 555 | WP_000904979.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| ARC77_RS20805 () | 4074042..4074815 | - | 774 | WP_000355475.1 | hypothetical protein | - |
| ARC77_RS20810 () | 4075639..4076382 | + | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
| ARC77_RS20815 () | 4076424..4076858 | - | 435 | Protein_3923 | IS3 family transposase ISEc48 | Transposase |
| ARC77_RS20825 () | 4077345..4078526 | + | 1182 | WP_001130487.1 | hypothetical protein ; Integrase | Integrase |
| ARC77_RS20830 () | 4078530..4078946 | + | 417 | WP_000082144.1 | hypothetical protein | - |
| ARC77_RS20835 () | 4078919..4079536 | + | 618 | WP_001303996.1 | hypothetical protein | - |
| ARC77_RS20840 () | 4079536..4079994 | + | 459 | WP_000251694.1 | hypothetical protein | - |
| ARC77_RS20845 () | 4079987..4080619 | + | 633 | WP_000999326.1 | AAA family ATPase | - |
| ARC77_RS20850 () | 4080650..4081039 | + | 390 | WP_000647286.1 | hypothetical protein | - |
| ARC77_RS20860 () | 4081239..4081805 | + | 567 | WP_000350115.1 | hypothetical protein | - |
| ARC77_RS20865 () | 4082215..4082487 | - | 273 | WP_001185340.1 | ogr/Delta-like zinc finger family protein | - |
| ARC77_RS20870 () | 4082493..4083044 | - | 552 | WP_000968317.1 | Polarity suppression protein | - |
| ARC77_RS20875 () | 4083041..4083793 | - | 753 | WP_000154958.1 | septation initiation protein | - |
| ARC77_RS20885 () | 4084727..4084987 | + | 261 | WP_001244581.1 | AlpA family transcriptional regulator | - |
| ARC77_RS20890 () | 4084984..4085541 | + | 558 | WP_000973389.1 | host cell division inhibitor Icd-like protein | - |
| ARC77_RS20895 () | 4085538..4085759 | + | 222 | WP_001071227.1 | hypothetical protein | - |
| ARC77_RS20900 () | 4085759..4086082 | + | 324 | WP_000562750.1 | DUF5375 family protein | - |
| ARC77_RS20905 () | 4086096..4088429 | + | 2334 | WP_000016225.1 | toprim domain-containing protein | - |
| ARC77_RS20910 () | 4088562..4089518 | - | 957 | WP_000205213.1 | hypothetical protein | - |
| ARC77_RS20915 () | 4090194..4091093 | - | 900 | WP_000687183.1 | hypothetical protein | VF |
| ARC77_RS20920 () | 4091192..4091914 | + | 723 | WP_000361969.1 | hypothetical protein | VF |
| ARC77_RS20925 () | 4092081..4092359 | + | 279 | WP_001301751.1 | hypothetical protein | - |
| ARC77_RS20930 () | 4093062..4093964 | - | 903 | WP_010917758.1 | hypothetical protein | VF |
| ARC77_RS20935 () | 4094210..4095268 | + | 1059 | WP_001303808.1 | alpha/beta hydrolase | - |
| ARC77_RS20940 () | 4095410..4096537 | + | 1128 | WP_000171065.1 | MFS transporter | - |
| ARC77_RS20945 () | 4096716..4097672 | - | 957 | WP_000121344.1 | molybdenum cofactor insertion chaperone PaoD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|