MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 104100 bp
Accession: NZ_CP015002 Location: 5111857..5215956 Organism: Pseudomonas aeruginosa strain PA8281 Replicon: chromosome
Accession: NZ_CP015002 Location: 5111857..5215956 Organism: Pseudomonas aeruginosa strain PA8281 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA8281_RS23840 () | 5107365..5107637 | + | 273 | WP_019725834.1 | cysteine-rich CWC family protein | - |
| PA8281_RS23845 () | 5107637..5108329 | + | 693 | WP_003098362.1 | 16S rRNA pseudouridine(516) synthase | - |
| PA8281_RS23850 () | 5108465..5109508 | + | 1044 | WP_003098363.1 | L,D-transpeptidase | - |
| PA8281_RS23855 () | 5109588..5110325 | + | 738 | WP_003114158.1 | murein L,D-transpeptidase catalytic domain family protein | - |
| PA8281_RS23860 () | 5110777..5111679 | + | 903 | WP_003123042.1 | (R)-3-hydroxydecanoyl-ACP:CoA transacylase | - |
| PA8281_RS23870 () | 5112125..5114053 | + | 1929 | WP_008264493.1 | tyrosine-type recombinase/integrase | - |
| PA8281_RS23875 () | 5114618..5115373 | + | 756 | WP_008265643.1 | hypothetical protein | - |
| PA8281_RS23880 () | 5115492..5115704 | + | 213 | WP_014603611.1 | AlpA family transcriptional regulator | - |
| PA8281_RS23885 () | 5115747..5116622 | + | 876 | WP_008268124.1 | ParA family protein | - |
| PA8281_RS23890 () | 5116606..5116854 | + | 249 | WP_008268494.1 | hypothetical protein | - |
| PA8281_RS23895 () | 5116847..5118475 | + | 1629 | WP_014603610.1 | ParB family protein | - |
| PA8281_RS23900 () | 5118491..5119051 | + | 561 | WP_008267477.1 | DUF2857 domain-containing protein | - |
| PA8281_RS23905 () | 5119055..5120299 | + | 1245 | WP_033940508.1 | hypothetical protein | - |
| PA8281_RS23910 () | 5120617..5121417 | + | 801 | WP_033940511.1 | TIGR03761 family integrating conjugative element protein | - |
| PA8281_RS23915 () | 5121414..5121941 | + | 528 | WP_012205958.1 | DUF3158 family protein | - |
| PA8281_RS23920 () | 5122015..5122455 | + | 441 | WP_012205959.1 | single-stranded DNA-binding protein | - |
| PA8281_RS23925 () | 5122725..5124737 | + | 2013 | WP_012205960.1 | DNA topoisomerase III | - |
| PA8281_RS23930 () | 5125261..5125506 | + | 246 | WP_012205961.1 | hypothetical protein | - |
| PA8281_RS23935 () | 5125836..5126048 | + | 213 | WP_003158617.1 | hypothetical protein | - |
| PA8281_RS23940 () | 5126070..5126462 | + | 393 | WP_008267955.1 | hypothetical protein | - |
| PA8281_RS23945 () | 5126675..5127412 | + | 738 | WP_008264880.1 | hypothetical protein | - |
| PA8281_RS23950 () | 5127507..5127785 | + | 279 | WP_008267470.1 | hypothetical protein | - |
| PA8281_RS23955 () | 5128066..5128878 | + | 813 | WP_033940514.1 | GTPase | - |
| PA8281_RS23960 () | 5129258..5130172 | + | 915 | WP_008268542.1 | DUF3577 domain-containing protein | - |
| PA8281_RS23965 () | 5130227..5130925 | + | 699 | WP_008268776.1 | DUF3275 family protein | - |
| PA8281_RS23970 () | 5131017..5131424 | + | 408 | WP_008265771.1 | hypothetical protein | - |
| PA8281_RS23975 () | 5131508..5132158 | + | 651 | WP_008268678.1 | hypothetical protein | - |
| PA8281_RS23980 () | 5132222..5133343 | + | 1122 | WP_033940515.1 | class I SAM-dependent methyltransferase | - |
| PA8281_RS23985 () | 5133446..5133757 | + | 312 | WP_008265015.1 | hypothetical protein | - |
| PA8281_RS23990 () | 5133827..5134132 | + | 306 | WP_008266046.1 | hypothetical protein | - |
| PA8281_RS23995 () | 5134269..5136548 | + | 2280 | WP_014603605.1 | DEAD/DEAH box helicase | - |
| PA8281_RS24000 () | 5136908..5137486 | + | 579 | WP_014603604.1 | PilL N-terminal domain-containing protein | - |
| PA8281_RS24005 () | 5137483..5138124 | + | 642 | WP_033940516.1 | hypothetical protein | - |
| PA8281_RS24010 () | 5138139..5138876 | + | 738 | WP_014603602.1 | TIGR03759 family integrating conjugative element protein | - |
| PA8281_RS24015 () | 5138858..5139463 | + | 606 | WP_014603601.1 | transglycosylase SLT domain-containing protein | - |
| PA8281_RS24020 () | 5139460..5140008 | + | 549 | WP_008266518.1 | integrating conjugative element protein | - |
| PA8281_RS24025 () | 5140013..5142196 | + | 2184 | WP_033940518.1 | type IV conjugative transfer system coupling protein TraD | - |
| PA8281_RS24030 () | 5142193..5142942 | + | 750 | WP_008267465.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PA8281_RS24035 () | 5143041..5143424 | + | 384 | WP_008266900.1 | RAQPRD family integrative conjugative element protein | - |
| PA8281_RS24040 () | 5143421..5143654 | + | 234 | WP_008266807.1 | TIGR03758 family integrating conjugative element protein | - |
| PA8281_RS24045 () | 5143671..5144030 | + | 360 | WP_022579862.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PA8281_RS24050 () | 5144044..5144454 | + | 411 | WP_033940520.1 | TIGR03750 family conjugal transfer protein | - |
| PA8281_RS24055 () | 5144451..5145143 | + | 693 | WP_008267835.1 | TIGR03746 family integrating conjugative element protein | - |
| PA8281_RS24060 () | 5145149..5146066 | + | 918 | WP_033940524.1 | TIGR03749 family integrating conjugative element protein | - |
| PA8281_RS24065 () | 5146056..5147465 | + | 1410 | WP_014603598.1 | TIGR03752 family integrating conjugative element protein | - |
| PA8281_RS24070 () | 5147446..5147895 | + | 450 | WP_008265628.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PA8281_RS24075 () | 5147895..5150804 | + | 2910 | WP_008265140.1 | conjugative transfer ATPase | - |
| PA8281_RS24080 () | 5150820..5151584 | + | 765 | WP_014596091.1 | DsbA family protein | - |
| PA8281_RS24085 () | 5151763..5152101 | + | 339 | Protein_4805 | DNA repair protein RadC | - |
| PA8281_RS24090 () | 5152305..5153315 | - | 1011 | WP_012248435.1 | tyrosine-type recombinase/integrase | - |
| PA8281_RS24095 () | 5153312..5154304 | - | 993 | WP_012248434.1 | tyrosine-type recombinase/integrase | - |
| PA8281_RS24100 () | 5154301..5155560 | - | 1260 | WP_012248433.1 | tyrosine-type recombinase/integrase | - |
| PA8281_RS33275 () | 5155700..5155861 | + | 162 | Protein_4809 | DNA repair protein RadC | - |
| PA8281_RS24105 () | 5156026..5156472 | + | 447 | WP_008266034.1 | TIGR03757 family integrating conjugative element protein | - |
| PA8281_RS24110 () | 5156469..5157416 | + | 948 | WP_012205991.1 | TIGR03756 family integrating conjugative element protein | - |
| PA8281_RS24115 () | 5157427..5158833 | + | 1407 | WP_008266424.1 | integrating conjugative element protein | - |
| PA8281_RS24120 () | 5158830..5159201 | + | 372 | WP_008264618.1 | hypothetical protein | - |
| PA8281_RS24125 () | 5159217..5160740 | + | 1524 | WP_008266205.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PA8281_RS24130 () | 5160747..5161106 | - | 360 | WP_008264713.1 | DUF3742 family protein | - |
| PA8281_RS24135 () | 5161134..5161592 | - | 459 | WP_008267277.1 | type II toxin-antitoxin system YhaV family toxin | - |
| PA8281_RS24140 () | 5161592..5161909 | - | 318 | WP_008265574.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| PA8281_RS24145 () | 5162207..5164063 | + | 1857 | WP_008264901.1 | TraI domain-containing protein | - |
| PA8281_RS24150 () | 5164094..5167429 | - | 3336 | WP_008267353.1 | cold shock domain-containing protein | - |
| PA8281_RS24155 () | 5167426..5170062 | - | 2637 | WP_008265595.1 | chromosome segregation ATPase | - |
| PA8281_RS24160 () | 5170065..5172032 | - | 1968 | WP_008266911.1 | hypothetical protein | - |
| PA8281_RS24165 () | 5171999..5175355 | - | 3357 | WP_008266894.1 | AAA family ATPase | - |
| PA8281_RS24170 () | 5175352..5176695 | - | 1344 | WP_014603592.1 | serine/threonine protein kinase | - |
| PA8281_RS24175 () | 5176688..5177404 | - | 717 | WP_023124773.1 | protein phosphatase 2C domain-containing protein | - |
| PA8281_RS24180 () | 5177401..5177889 | - | 489 | WP_023124774.1 | hypothetical protein | - |
| PA8281_RS24185 () | 5177886..5179682 | - | 1797 | WP_008266170.1 | DUF1887 family protein | - |
| PA8281_RS24190 () | 5179646..5182321 | - | 2676 | WP_008268248.1 | DUF87 domain-containing protein | - |
| PA8281_RS24195 () | 5182318..5182548 | - | 231 | WP_031757235.1 | hypothetical protein | - |
| PA8281_RS24200 () | 5182541..5182885 | - | 345 | WP_033940875.1 | hypothetical protein | - |
| PA8281_RS24205 () | 5182882..5184192 | - | 1311 | WP_012206005.1 | hypothetical protein | - |
| PA8281_RS24210 () | 5184209..5184478 | - | 270 | WP_012206006.1 | WXG100 family type VII secretion target | - |
| PA8281_RS24215 () | 5184478..5185212 | - | 735 | WP_012206007.1 | VWA domain-containing protein | - |
| PA8281_RS24220 () | 5185293..5188298 | - | 3006 | WP_008266576.1 | DEAD/DEAH box helicase family protein | - |
| PA8281_RS24225 () | 5188310..5190295 | - | 1986 | WP_033940889.1 | site-specific DNA-methyltransferase | - |
| PA8281_RS24230 () | 5190322..5191116 | - | 795 | WP_014603588.1 | DUF4391 domain-containing protein | - |
| PA8281_RS24235 () | 5191113..5192900 | - | 1788 | WP_008266060.1 | DUF262 domain-containing protein | - |
| PA8281_RS24240 () | 5192915..5196148 | - | 3234 | WP_014603587.1 | helicase | - |
| PA8281_RS24245 () | 5196161..5197069 | - | 909 | WP_008267281.1 | WYL domain-containing protein | - |
| PA8281_RS24250 () | 5197348..5197710 | + | 363 | WP_033940876.1 | LysR family transcriptional regulator | - |
| PA8281_RS24255 () | 5197774..5199294 | + | 1521 | WP_033940877.1 | IS3 family transposase | - |
| PA8281_RS24260 () | 5199369..5200166 | - | 798 | WP_033940878.1 | IS21-like element helper ATPase IstB | - |
| PA8281_RS24265 () | 5200156..5201682 | - | 1527 | WP_033940880.1 | IS21 family transposase | - |
| PA8281_RS24270 () | 5201786..5202331 | + | 546 | Protein_4843 | LysR family substrate-binding domain-containing protein | - |
| PA8281_RS24275 () | 5202367..5202672 | - | 306 | WP_033940882.1 | helix-turn-helix domain-containing protein | - |
| PA8281_RS24280 () | 5202794..5203435 | + | 642 | WP_033940883.1 | substrate-binding domain-containing protein | - |
| PA8281_RS24285 () | 5203723..5204070 | - | 348 | WP_016263850.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PA8281_RS24290 () | 5204080..5204331 | - | 252 | WP_003114155.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PA8281_RS24295 () | 5204545..5205528 | - | 984 | WP_019725833.1 | tyrosine-type recombinase/integrase | - |
| PA8281_RS24300 () | 5205528..5206820 | - | 1293 | WP_003115206.1 | hypothetical protein | - |
| PA8281_RS24305 () | 5207079..5208341 | - | 1263 | WP_019725831.1 | hypothetical protein | - |
| PA8281_RS24310 () | 5208343..5208693 | - | 351 | WP_019725830.1 | DUF2523 domain-containing protein | - |
| PA8281_RS24315 () | 5208703..5209659 | - | 957 | WP_019725829.1 | hypothetical protein | - |
| PA8281_RS24320 () | 5209976..5210194 | - | 219 | WP_019725828.1 | hypothetical protein | - |
| PA8281_RS24325 () | 5210208..5210459 | - | 252 | WP_003124954.1 | hypothetical protein | - |
| PA8281_RS24335 () | 5210580..5211014 | - | 435 | WP_019725827.1 | hypothetical protein | - |
| PA8281_RS24345 () | 5211530..5211820 | - | 291 | WP_023123415.1 | DUF5447 family protein | - |
| PA8281_RS24355 () | 5212038..5212253 | - | 216 | WP_019725826.1 | hypothetical protein | - |
| PA8281_RS33280 () | 5212366..5212638 | + | 273 | WP_071535817.1 | DNA-binding protein | - |
| PA8281_RS33285 () | 5212694..5213392 | + | 699 | WP_023123416.1 | hypothetical protein | - |
| PA8281_RS33750 () | 5213415..5213882 | + | 468 | WP_124136458.1 | hypothetical protein | - |
| PA8281_RS33755 () | 5214354..5214956 | + | 603 | WP_023123417.1 | hypothetical protein | - |
| PA8281_RS24360 () | 5216094..5216570 | - | 477 | WP_025981526.1 | hypothetical protein | - |
| PA8281_RS24365 () | 5216802..5217095 | - | 294 | WP_003120795.1 | DUF2845 domain-containing protein | - |
| PA8281_RS24370 () | 5217434..5217691 | + | 258 | WP_003120796.1 | YjhX family toxin | - |
| PA8281_RS24375 () | 5217751..5218257 | + | 507 | WP_003160816.1 | N-acetyltransferase | - |
| PA8281_RS24380 () | 5218301..5218696 | - | 396 | WP_003098430.1 | lactoylglutathione lyase | - |
| PA8281_RS24385 () | 5218741..5219037 | - | 297 | WP_003120798.1 | antibiotic biosynthesis monooxygenase | - |
| PA8281_RS24390 () | 5219153..5220007 | + | 855 | WP_003123052.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|