MGE detailed information
MGE type: Prophage MGE length: 22144 bp
Accession: NZ_CP015001 Location: 5013969..5036112 Organism: Pseudomonas aeruginosa strain PA1088 Replicon: chromosome
Accession: NZ_CP015001 Location: 5013969..5036112 Organism: Pseudomonas aeruginosa strain PA1088 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA1088_RS23225 () | 5009328..5009600 | + | 273 | WP_019725834.1 | cysteine-rich CWC family protein | - |
| PA1088_RS23230 () | 5009600..5010292 | + | 693 | WP_003098362.1 | 16S rRNA pseudouridine(516) synthase | - |
| PA1088_RS23235 () | 5010428..5011471 | + | 1044 | WP_003098363.1 | L,D-transpeptidase | - |
| PA1088_RS23240 () | 5011551..5012288 | + | 738 | WP_003114158.1 | murein L,D-transpeptidase catalytic domain family protein | - |
| PA1088_RS23245 () | 5012740..5013642 | + | 903 | WP_003123042.1 | (R)-3-hydroxydecanoyl-ACP:CoA transacylase | - |
| PA1088_RS23255 () | 5013969..5014316 | - | 348 | WP_016263850.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PA1088_RS23260 () | 5014326..5014577 | - | 252 | WP_003114155.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PA1088_RS23265 () | 5014791..5015774 | - | 984 | WP_019725833.1 | IS91 family transposase ISCARN110 | Transposase |
| PA1088_RS23270 () | 5015774..5017066 | - | 1293 | WP_003115206.1 | hypothetical protein | - |
| PA1088_RS23275 () | 5017325..5018587 | - | 1263 | WP_019725831.1 | Zona occludens toxin | VF |
| PA1088_RS23280 () | 5018589..5018939 | - | 351 | WP_019725830.1 | DUF2523 domain-containing protein | - |
| PA1088_RS23285 () | 5018949..5019905 | - | 957 | WP_019725829.1 | hypothetical protein | - |
| PA1088_RS23290 () | 5020222..5020440 | - | 219 | WP_019725828.1 | hypothetical protein | - |
| PA1088_RS23295 () | 5020454..5020705 | - | 252 | WP_003124954.1 | hypothetical protein | - |
| PA1088_RS23305 () | 5020826..5021260 | - | 435 | WP_019725827.1 | hypothetical protein | - |
| PA1088_RS23315 () | 5021776..5022066 | - | 291 | WP_023123415.1 | DUF5447 family protein | - |
| PA1088_RS23325 () | 5022284..5022499 | - | 216 | WP_019725826.1 | hypothetical protein | - |
| PA1088_RS32130 () | 5022612..5022884 | + | 273 | WP_071535817.1 | DNA-binding protein | - |
| PA1088_RS32135 () | 5022940..5023638 | + | 699 | WP_023123416.1 | hypothetical protein | - |
| PA1088_RS32555 () | 5023661..5024128 | + | 468 | WP_124136458.1 | hypothetical protein | - |
| PA1088_RS32560 () | 5024600..5025202 | + | 603 | WP_023123417.1 | hypothetical protein | - |
| PA1088_RS23330 () | 5026340..5026816 | - | 477 | WP_025981526.1 | hypothetical protein | - |
| PA1088_RS23335 () | 5027048..5027341 | - | 294 | WP_003120795.1 | DUF2845 domain-containing protein | - |
| PA1088_RS23340 () | 5027680..5027937 | + | 258 | WP_003120796.1 | YjhX family toxin | - |
| PA1088_RS23345 () | 5027997..5028503 | + | 507 | WP_003160816.1 | N-acetyltransferase | - |
| PA1088_RS23350 () | 5028547..5028942 | - | 396 | WP_003098430.1 | lactoylglutathione lyase | - |
| PA1088_RS23355 () | 5028987..5029283 | - | 297 | WP_003120798.1 | antibiotic biosynthesis monooxygenase | - |
| PA1088_RS23360 () | 5029399..5030253 | + | 855 | WP_003123052.1 | LysR family transcriptional regulator | - |
| PA1088_RS23365 () | 5030539..5031318 | + | 780 | WP_003120800.1 | EAL domain-containing protein | - |
| PA1088_RS23370 () | 5031411..5032049 | + | 639 | WP_003120801.1 | Chloramphenicol acetyltransferase | VF |
| PA1088_RS23375 () | 5032304..5033203 | + | 900 | WP_003120802.1 | Putative glycosyltransferase EpsE | VF |
| PA1088_RS23380 () | 5033331..5034725 | + | 1395 | WP_019725824.1 | amidase | - |
| PA1088_RS23385 () | 5034796..5036112 | + | 1317 | WP_003123056.1 | MFS transporter | - |
| PA1088_RS23390 () | 5036191..5037096 | + | 906 | WP_019725823.1 | sterol desaturase family protein | - |
| PA1088_RS23395 () | 5037079..5037744 | - | 666 | WP_003116524.1 | helix-turn-helix domain-containing protein | - |
| PA1088_RS23400 () | 5037816..5038802 | - | 987 | WP_003098443.1 | LysR family transcriptional regulator | - |
| PA1088_RS23405 () | 5038812..5039237 | - | 426 | WP_003110838.1 | hypothetical protein | - |
| PA1088_RS23410 () | 5039237..5040181 | - | 945 | WP_003116526.1 | peptidylprolyl isomerase | - |
| PA1088_RS23415 () | 5040186..5040665 | - | 480 | WP_003085375.1 | YbjN domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|