MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 145032 bp
Accession: NZ_CP014999 Location: 5134192..5279223 Organism: Pseudomonas aeruginosa strain PA7790 Replicon: chromosome
Accession: NZ_CP014999 Location: 5134192..5279223 Organism: Pseudomonas aeruginosa strain PA7790 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA7790_RS24010 () | 5129700..5129972 | + | 273 | WP_019725834.1 | cysteine-rich CWC family protein | - |
| PA7790_RS24015 () | 5129972..5130664 | + | 693 | WP_003098362.1 | 16S rRNA pseudouridine(516) synthase | - |
| PA7790_RS24020 () | 5130800..5131843 | + | 1044 | WP_003098363.1 | L,D-transpeptidase | - |
| PA7790_RS24025 () | 5131923..5132660 | + | 738 | WP_003114158.1 | murein L,D-transpeptidase catalytic domain family protein | - |
| PA7790_RS24030 () | 5133112..5134014 | + | 903 | WP_003123042.1 | (R)-3-hydroxydecanoyl-ACP:CoA transacylase | - |
| PA7790_RS24040 () | 5134603..5135217 | + | 615 | WP_124182787.1 | hypothetical protein | - |
| PA7790_RS24045 () | 5135651..5135998 | + | 348 | WP_031632186.1 | hypothetical protein | - |
| PA7790_RS24050 () | 5136225..5136491 | - | 267 | WP_031632187.1 | hypothetical protein | - |
| PA7790_RS24055 () | 5136560..5137363 | - | 804 | WP_031632188.1 | DNA adenine methylase | - |
| PA7790_RS24060 () | 5137508..5137768 | - | 261 | WP_033964234.1 | hypothetical protein | - |
| PA7790_RS34140 () | 5137765..5138133 | - | 369 | WP_079866817.1 | hypothetical protein | - |
| PA7790_RS24070 () | 5138130..5138759 | - | 630 | WP_071501038.1 | glycoside hydrolase family 19 protein | - |
| PA7790_RS24075 () | 5139005..5139241 | - | 237 | WP_003096116.1 | hypothetical protein | - |
| PA7790_RS24080 () | 5139241..5141001 | - | 1761 | WP_025325096.1 | hypothetical protein | - |
| PA7790_RS24085 () | 5140998..5141870 | - | 873 | WP_195183210.1 | hypothetical protein | - |
| PA7790_RS24090 () | 5141855..5142856 | - | 1002 | WP_016561962.1 | hypothetical protein | - |
| PA7790_RS24095 () | 5142856..5146407 | - | 3552 | WP_034052276.1 | hypothetical protein | - |
| PA7790_RS24100 () | 5146456..5146866 | - | 411 | WP_019396973.1 | hypothetical protein | - |
| PA7790_RS24105 () | 5146863..5150123 | - | 3261 | WP_071501039.1 | tape measure protein | - |
| PA7790_RS24110 () | 5150352..5150792 | - | 441 | WP_014602839.1 | RICIN domain-containing protein | - |
| PA7790_RS24115 () | 5151025..5151771 | - | 747 | WP_019682368.1 | hypothetical protein | - |
| PA7790_RS24120 () | 5151799..5151993 | - | 195 | WP_023125699.1 | hypothetical protein | - |
| PA7790_RS24125 () | 5152044..5152481 | - | 438 | WP_015648938.1 | hypothetical protein | - |
| PA7790_RS24130 () | 5152478..5152789 | - | 312 | WP_170918858.1 | hypothetical protein | - |
| PA7790_RS24135 () | 5152792..5153790 | - | 999 | WP_071501040.1 | major capsid protein | - |
| PA7790_RS24140 () | 5153858..5154493 | - | 636 | WP_023096402.1 | head decoration protein | - |
| PA7790_RS24145 () | 5154490..5155662 | - | 1173 | WP_019726635.1 | Clp protease ClpP | - |
| PA7790_RS24150 () | 5155646..5157112 | - | 1467 | WP_019726636.1 | phage portal protein | - |
| PA7790_RS24155 () | 5157112..5157336 | - | 225 | WP_004353026.1 | hypothetical protein | - |
| PA7790_RS24160 () | 5157348..5159363 | - | 2016 | WP_019726637.1 | phage terminase large subunit family protein | - |
| PA7790_RS24165 () | 5159367..5159957 | - | 591 | WP_019726638.1 | hypothetical protein | - |
| PA7790_RS24170 () | 5160213..5160950 | - | 738 | WP_019726639.1 | hypothetical protein | - |
| PA7790_RS24175 () | 5160953..5161231 | - | 279 | WP_025325111.1 | phage holin family protein | - |
| PA7790_RS24180 () | 5161236..5161601 | - | 366 | WP_004353017.1 | hypothetical protein | - |
| PA7790_RS34695 () | 5161800..5162357 | - | 558 | WP_128568836.1 | hypothetical protein | - |
| PA7790_RS24185 () | 5162697..5165435 | - | 2739 | WP_071501041.1 | bifunctional DNA primase/polymerase | - |
| PA7790_RS24190 () | 5165432..5165674 | - | 243 | WP_019726642.1 | TraR/DksA C4-type zinc finger protein | - |
| PA7790_RS24195 () | 5165667..5166167 | - | 501 | WP_033980361.1 | hypothetical protein | - |
| PA7790_RS24200 () | 5166374..5166577 | + | 204 | WP_019726644.1 | hypothetical protein | - |
| PA7790_RS24205 () | 5166767..5166997 | - | 231 | WP_028680740.1 | helix-turn-helix domain-containing protein | - |
| PA7790_RS24210 () | 5167229..5167786 | + | 558 | WP_078451259.1 | helix-turn-helix transcriptional regulator | - |
| PA7790_RS24220 () | 5168079..5168387 | + | 309 | WP_028680742.1 | hypothetical protein | - |
| PA7790_RS24225 () | 5168384..5168953 | + | 570 | WP_028680743.1 | deoxynucleotide monophosphate kinase | - |
| PA7790_RS24230 () | 5168965..5169249 | + | 285 | WP_028680744.1 | hypothetical protein | - |
| PA7790_RS24235 () | 5169246..5169614 | + | 369 | WP_028680745.1 | hypothetical protein | - |
| PA7790_RS24240 () | 5169611..5169847 | + | 237 | WP_019726652.1 | pyocin activator PrtN family protein | - |
| PA7790_RS24245 () | 5170065..5170412 | + | 348 | WP_031632202.1 | hypothetical protein | - |
| PA7790_RS24250 () | 5170458..5171267 | + | 810 | WP_028680747.1 | DUF2303 family protein | - |
| PA7790_RS24255 () | 5171334..5172068 | + | 735 | WP_033971084.1 | hypothetical protein | - |
| PA7790_RS24260 () | 5172077..5172622 | + | 546 | WP_031632204.1 | phosphohydrolase | - |
| PA7790_RS34970 () | 5172619..5173428 | + | 810 | WP_071501042.1 | hypothetical protein | - |
| PA7790_RS34150 () | 5173540..5173746 | + | 207 | WP_071534345.1 | AlpA family phage regulatory protein | - |
| PA7790_RS24270 () | 5173752..5174954 | - | 1203 | WP_033964186.1 | hypothetical protein ; Integrase | Integrase |
| PA7790_RS24275 () | 5175392..5177320 | + | 1929 | WP_008264493.1 | Prophage integrase IntS ; Integrase | Integrase |
| PA7790_RS24280 () | 5177885..5178640 | + | 756 | WP_008265643.1 | hypothetical protein | - |
| PA7790_RS24285 () | 5178759..5178971 | + | 213 | WP_014603611.1 | AlpA family transcriptional regulator | - |
| PA7790_RS24290 () | 5179014..5179889 | + | 876 | WP_008268124.1 | hypothetical protein | VF |
| PA7790_RS24295 () | 5179873..5180121 | + | 249 | WP_008268494.1 | hypothetical protein | - |
| PA7790_RS24300 () | 5180114..5181742 | + | 1629 | WP_014603610.1 | ParB family protein | - |
| PA7790_RS24305 () | 5181758..5182318 | + | 561 | WP_008267477.1 | DUF2857 domain-containing protein | - |
| PA7790_RS24310 () | 5182322..5183566 | + | 1245 | WP_033940508.1 | hypothetical protein | - |
| PA7790_RS24315 () | 5183884..5184684 | + | 801 | WP_033940511.1 | TIGR03761 family integrating conjugative element protein | - |
| PA7790_RS24320 () | 5184681..5185208 | + | 528 | WP_012205958.1 | DUF3158 family protein | - |
| PA7790_RS24325 () | 5185282..5185722 | + | 441 | WP_012205959.1 | single-stranded DNA-binding protein | - |
| PA7790_RS24330 () | 5185992..5188004 | + | 2013 | WP_012205960.1 | DNA topoisomerase III | - |
| PA7790_RS24335 () | 5188528..5188773 | + | 246 | WP_012205961.1 | hypothetical protein | - |
| PA7790_RS24340 () | 5189103..5189315 | + | 213 | WP_003158617.1 | hypothetical protein | - |
| PA7790_RS24345 () | 5189337..5189729 | + | 393 | WP_008267955.1 | hypothetical protein | - |
| PA7790_RS24350 () | 5189942..5190679 | + | 738 | WP_008264880.1 | hypothetical protein | - |
| PA7790_RS24355 () | 5190774..5191052 | + | 279 | WP_008267470.1 | hypothetical protein | - |
| PA7790_RS24360 () | 5191333..5192145 | + | 813 | WP_033940514.1 | GTPase | - |
| PA7790_RS24365 () | 5192525..5193439 | + | 915 | WP_008268542.1 | DUF3577 domain-containing protein | - |
| PA7790_RS24370 () | 5193494..5194192 | + | 699 | WP_008268776.1 | DUF3275 family protein | - |
| PA7790_RS24375 () | 5194284..5194691 | + | 408 | WP_008265771.1 | hypothetical protein | - |
| PA7790_RS24380 () | 5194775..5195425 | + | 651 | WP_008268678.1 | hypothetical protein | - |
| PA7790_RS24385 () | 5195489..5196610 | + | 1122 | WP_033940515.1 | class I SAM-dependent methyltransferase | - |
| PA7790_RS24390 () | 5196713..5197024 | + | 312 | WP_008265015.1 | hypothetical protein | - |
| PA7790_RS24395 () | 5197094..5197399 | + | 306 | WP_008266046.1 | hypothetical protein | - |
| PA7790_RS24400 () | 5197536..5199815 | + | 2280 | WP_014603605.1 | DEAD/DEAH box helicase | - |
| PA7790_RS24405 () | 5200175..5200753 | + | 579 | WP_014603604.1 | hypothetical protein | VF |
| PA7790_RS24410 () | 5200750..5201391 | + | 642 | WP_033940516.1 | hypothetical protein | - |
| PA7790_RS24415 () | 5201406..5202143 | + | 738 | WP_014603602.1 | TIGR03759 family integrating conjugative element protein | - |
| PA7790_RS24420 () | 5202125..5202730 | + | 606 | WP_014603601.1 | hypothetical protein | VF |
| PA7790_RS24425 () | 5202727..5203275 | + | 549 | WP_008266518.1 | integrating conjugative element protein | - |
| PA7790_RS24430 () | 5203280..5205463 | + | 2184 | WP_033940518.1 | type IV conjugative transfer system coupling protein TraD | - |
| PA7790_RS24435 () | 5205460..5206209 | + | 750 | WP_008267465.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PA7790_RS24440 () | 5206308..5206691 | + | 384 | WP_008266900.1 | RAQPRD family integrative conjugative element protein | - |
| PA7790_RS24445 () | 5206688..5206921 | + | 234 | WP_008266807.1 | TIGR03758 family integrating conjugative element protein | - |
| PA7790_RS24450 () | 5206938..5207297 | + | 360 | WP_022579862.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PA7790_RS24455 () | 5207311..5207721 | + | 411 | WP_033940520.1 | TIGR03750 family conjugal transfer protein | - |
| PA7790_RS24460 () | 5207718..5208410 | + | 693 | WP_008267835.1 | TIGR03746 family integrating conjugative element protein | - |
| PA7790_RS24465 () | 5208416..5209333 | + | 918 | WP_033940524.1 | TIGR03749 family integrating conjugative element protein | - |
| PA7790_RS24470 () | 5209323..5210732 | + | 1410 | WP_014603598.1 | TIGR03752 family integrating conjugative element protein | - |
| PA7790_RS24475 () | 5210713..5211162 | + | 450 | WP_008265628.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PA7790_RS24480 () | 5211162..5214071 | + | 2910 | WP_008265140.1 | conjugative transfer ATPase | - |
| PA7790_RS24485 () | 5214087..5214851 | + | 765 | WP_014596091.1 | DsbA family protein | - |
| PA7790_RS24490 () | 5215030..5215368 | + | 339 | Protein_4891 | DNA repair protein RadC | - |
| PA7790_RS24495 () | 5215572..5216582 | - | 1011 | WP_012248435.1 | IS91 family transposase ISTha3 | Transposase |
| PA7790_RS24500 () | 5216579..5217571 | - | 993 | WP_012248434.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PA7790_RS24505 () | 5217568..5218827 | - | 1260 | WP_012248433.1 | Tyrosine recombinase XerD | VF |
| PA7790_RS34160 () | 5218967..5219128 | + | 162 | Protein_4895 | DNA repair protein RadC | - |
| PA7790_RS24510 () | 5219293..5219739 | + | 447 | WP_008266034.1 | TIGR03757 family integrating conjugative element protein | - |
| PA7790_RS24515 () | 5219736..5220683 | + | 948 | WP_012205991.1 | TIGR03756 family integrating conjugative element protein | - |
| PA7790_RS24520 () | 5220694..5222100 | + | 1407 | WP_008266424.1 | integrating conjugative element protein | - |
| PA7790_RS24525 () | 5222097..5222468 | + | 372 | WP_008264618.1 | hypothetical protein | - |
| PA7790_RS24530 () | 5222484..5224007 | + | 1524 | WP_008266205.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PA7790_RS24535 () | 5224014..5224373 | - | 360 | WP_008264713.1 | DUF3742 family protein | - |
| PA7790_RS24540 () | 5224401..5224859 | - | 459 | WP_008267277.1 | type II toxin-antitoxin system YhaV family toxin | - |
| PA7790_RS24545 () | 5224859..5225176 | - | 318 | WP_008265574.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| PA7790_RS24550 () | 5225474..5227330 | + | 1857 | WP_008264901.1 | TraI domain-containing protein | - |
| PA7790_RS24555 () | 5227361..5230696 | - | 3336 | WP_008267353.1 | cold shock domain-containing protein | - |
| PA7790_RS24560 () | 5230693..5233329 | - | 2637 | WP_008265595.1 | chromosome segregation ATPase | - |
| PA7790_RS24565 () | 5233332..5235299 | - | 1968 | WP_008266911.1 | hypothetical protein | - |
| PA7790_RS24570 () | 5235266..5238622 | - | 3357 | WP_008266894.1 | AAA family ATPase | - |
| PA7790_RS24575 () | 5238619..5239962 | - | 1344 | WP_014603592.1 | serine/threonine protein kinase | - |
| PA7790_RS24580 () | 5239955..5240671 | - | 717 | WP_023124773.1 | protein phosphatase 2C domain-containing protein | - |
| PA7790_RS24585 () | 5240668..5241156 | - | 489 | WP_023124774.1 | hypothetical protein | - |
| PA7790_RS24590 () | 5241153..5242949 | - | 1797 | WP_008266170.1 | DUF1887 family protein | - |
| PA7790_RS24595 () | 5242913..5245588 | - | 2676 | WP_008268248.1 | DUF87 domain-containing protein | - |
| PA7790_RS24600 () | 5245585..5245815 | - | 231 | WP_031757235.1 | hypothetical protein | - |
| PA7790_RS24605 () | 5245808..5246152 | - | 345 | WP_033940875.1 | hypothetical protein | - |
| PA7790_RS24610 () | 5246149..5247459 | - | 1311 | WP_012206005.1 | hypothetical protein | - |
| PA7790_RS24615 () | 5247476..5247745 | - | 270 | WP_012206006.1 | WXG100 family type VII secretion target | - |
| PA7790_RS24620 () | 5247745..5248479 | - | 735 | WP_012206007.1 | VWA domain-containing protein | - |
| PA7790_RS24625 () | 5248560..5251565 | - | 3006 | WP_008266576.1 | DEAD/DEAH box helicase family protein | - |
| PA7790_RS24630 () | 5251577..5253562 | - | 1986 | WP_033940889.1 | site-specific DNA-methyltransferase | - |
| PA7790_RS24635 () | 5253589..5254383 | - | 795 | WP_014603588.1 | DUF4391 domain-containing protein | - |
| PA7790_RS24640 () | 5254380..5256167 | - | 1788 | WP_008266060.1 | DUF262 domain-containing protein | - |
| PA7790_RS24645 () | 5256182..5259415 | - | 3234 | WP_014603587.1 | helicase | - |
| PA7790_RS24650 () | 5259428..5260336 | - | 909 | WP_008267281.1 | WYL domain-containing protein | - |
| PA7790_RS24655 () | 5260615..5260977 | + | 363 | WP_033940876.1 | HTH-type transcriptional regulator TfdS | VF |
| PA7790_RS24660 () | 5261041..5262561 | + | 1521 | WP_033940877.1 | IS3 family transposase ISBmu11 | Transposase |
| PA7790_RS24665 () | 5262636..5263433 | - | 798 | WP_033940878.1 | IS21 family transposase ISCte8 | Transposase |
| PA7790_RS24670 () | 5263423..5264949 | - | 1527 | WP_033940880.1 | IS21 family transposase ISCte8 | Transposase |
| PA7790_RS24675 () | 5265053..5265598 | + | 546 | Protein_4929 | LysR family substrate-binding domain-containing protein | - |
| PA7790_RS34165 () | 5265634..5265939 | - | 306 | WP_033940882.1 | helix-turn-helix domain-containing protein | - |
| PA7790_RS24680 () | 5266061..5266702 | + | 642 | WP_033940883.1 | substrate-binding domain-containing protein | - |
| PA7790_RS24685 () | 5266990..5267337 | - | 348 | WP_016263850.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PA7790_RS34170 () | 5267347..5267598 | - | 252 | WP_003114155.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PA7790_RS24690 () | 5267812..5268795 | - | 984 | WP_019725833.1 | IS91 family transposase ISCARN110 | Transposase |
| PA7790_RS24695 () | 5268795..5270087 | - | 1293 | WP_003115206.1 | hypothetical protein | - |
| PA7790_RS24700 () | 5270346..5271608 | - | 1263 | WP_019725831.1 | Zona occludens toxin | VF |
| PA7790_RS24705 () | 5271610..5271960 | - | 351 | WP_019725830.1 | DUF2523 domain-containing protein | - |
| PA7790_RS24710 () | 5271970..5272926 | - | 957 | WP_019725829.1 | hypothetical protein | - |
| PA7790_RS24715 () | 5273243..5273461 | - | 219 | WP_019725828.1 | hypothetical protein | - |
| PA7790_RS24720 () | 5273475..5273726 | - | 252 | WP_003124954.1 | hypothetical protein | - |
| PA7790_RS24730 () | 5273847..5274281 | - | 435 | WP_019725827.1 | hypothetical protein | - |
| PA7790_RS24740 () | 5274797..5275087 | - | 291 | WP_023123415.1 | DUF5447 family protein | - |
| PA7790_RS24750 () | 5275305..5275520 | - | 216 | WP_019725826.1 | hypothetical protein | - |
| PA7790_RS34175 () | 5275633..5275905 | + | 273 | WP_071535817.1 | DNA-binding protein | - |
| PA7790_RS34180 () | 5275961..5276659 | + | 699 | WP_023123416.1 | hypothetical protein | - |
| PA7790_RS34700 () | 5276682..5277149 | + | 468 | WP_124136458.1 | hypothetical protein | - |
| PA7790_RS34705 () | 5277621..5278223 | + | 603 | WP_023123417.1 | hypothetical protein | - |
| PA7790_RS24755 () | 5279361..5279837 | - | 477 | WP_025981526.1 | hypothetical protein | - |
| PA7790_RS24760 () | 5280069..5280362 | - | 294 | WP_003120795.1 | DUF2845 domain-containing protein | - |
| PA7790_RS24765 () | 5280701..5280958 | + | 258 | WP_003120796.1 | YjhX family toxin | - |
| PA7790_RS24770 () | 5281018..5281524 | + | 507 | WP_003160816.1 | N-acetyltransferase | - |
| PA7790_RS24775 () | 5281568..5281963 | - | 396 | WP_003098430.1 | lactoylglutathione lyase | - |
| PA7790_RS24780 () | 5282008..5282304 | - | 297 | WP_003120798.1 | antibiotic biosynthesis monooxygenase | - |
| PA7790_RS24785 () | 5282420..5283274 | + | 855 | WP_003123052.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|