NZ_CP0149801..94034

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 94034 bp
Accession: NZ_CP014980        Location: 1..94034         Organism: Salmonella enterica subsp. enterica serovar Typhimurium str. CDC H2662       Replicon: plasmid pSTY1-H2662


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AX03_RS25005 () 95..379 + 285 WP_000477658.1 hypothetical protein -
AX03_RS25010 () 392..547 + 156 WP_000983042.1 hypothetical protein -
AX03_RS25015 () 713..1155 + 443 Protein_2 phospholipase -
AX03_RS25025 () 1334..1600 + 267 WP_010999936.1 replication regulatory protein RepA -
AX03_RS25035 () 1850..1927 + 78 WP_001541552.1 RepA leader peptide Tap -
AX03_RS25040 () 1908..2789 + 882 WP_001738692.1 incFII family plasmid replication initiator RepA -
AX03_RS25050 () 3649..3870 + 222 WP_071533052.1 SdiA-regulated domain-containing protein -
AX03_RS25055 () 3967..4725 - 759 WP_000417898.1 AraC family transcriptional regulator -
AX03_RS25060 () 4992..5549 - 558 WP_000725062.1 complement resistance protein Rck -
AX03_RS25065 () 5639..6538 - 900 WP_010999938.1 YjiK family protein -
AX03_RS25935 () 6535..6681 - 147 WP_001192557.1 hypothetical protein -
AX03_RS25070 () 6671..7324 - 654 WP_000178592.1 DsbA family protein -
AX03_RS25075 () 7569..7919 - 351 WP_001526811.1 helix-turn-helix transcriptional regulator -
AX03_RS25080 () 7904..8116 - 213 WP_000004313.1 transcriptional regulator PefI -
AX03_RS25085 () 8548..9423 - 876 WP_014343944.1 hypothetical protein -
AX03_RS25090 () 9676..10233 - 558 WP_010999940.1 membrane protein -
AX03_RS25095 () 10248..10940 - 693 WP_001038510.1 fimbrial chaperone PefD -
AX03_RS25100 () 10933..13341 - 2409 WP_000007893.1 outer membrane usher protein PefC -
AX03_RS25105 () 13569..14087 - 519 WP_000748205.1 major pilin PefA -
AX03_RS25110 () 14362..14664 - 303 WP_000979451.1 transcriptional regulator PefB -
AX03_RS25120 () 15383..15764 + 382 Protein_20 YgiW/YdeI family stress tolerance OB fold protein -
AX03_RS25940 () 15933..16377 + 445 Protein_21 site-specific integrase -
AX03_RS25135 () 16636..17625 - 990 WP_001527061.1 RepB family plasmid replication initiator protein -
AX03_RS25140 () 18119..18415 - 297 WP_001687482.1 hypothetical protein -
AX03_RS25150 () 18899..19420 - 522 WP_010999942.1 hypothetical protein -
AX03_RS25155 () 20096..20314 + 219 WP_000813641.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
AX03_RS25160 () 20316..20621 + 306 WP_001159863.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
AX03_RS25165 () 20623..20913 + 291 WP_001266176.1 hypothetical protein -
AX03_RS25170 () 20910..21431 + 522 WP_000198608.1 hypothetical protein -
AX03_RS25175 () 21466..22248 + 783 WP_000082169.1 site-specific integrase -
AX03_RS25180 () 22257..22970 + 714 Protein_30 EAL domain-containing protein -
AX03_RS25190 () 22974..23483 + 510 WP_001541544.1 CaiF/GrlA family transcriptional regulator -
AX03_RS25195 () 23477..23962 + 486 WP_000905606.1 membrane protein -
AX03_RS25945 () 24239..24526 - 288 WP_071530243.1 hypothetical protein -
AX03_RS25200 () 24682..25242 + 561 WP_000900095.1 inverse autotransporter beta domain-containing protein -
AX03_RS25205 () 25309..25659 - 351 WP_001541541.1 helix-turn-helix domain-containing protein -
AX03_RS25210 () 25716..26140 + 425 Protein_36 IS200/IS605 family transposase -
AX03_RS25215 () 26267..26917 - 651 WP_001575489.1 SPI-2 type III secretion system effector cysteine hydrolase SpvD -
AX03_RS25220 () 27178..27903 - 726 WP_001122242.1 type III secretion system effector phosphothreonine lyase SpvC -
AX03_RS25225 () 28184..29959 - 1776 WP_001676648.1 SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB -
AX03_RS26075 () 30011..30178 - 168 WP_001526987.1 hypothetical protein -
AX03_RS25230 () 30141..30908 - 768 WP_001526990.1 virulence protein SpvA -
AX03_RS25235 () 31082..31246 - 165 WP_001576629.1 glycoside hydrolase family protein -
AX03_RS25240 () 31420..32313 - 894 WP_000346691.1 virulence genes transcriptional activator SpvR -
AX03_RS25245 () 32922..33959 + 1038 WP_001121399.1 IS630 family transposase -
AX03_RS25250 () 34148..35173 - 1026 WP_001576625.1 ExeA family protein -
AX03_RS25255 () 35106..36770 - 1665 WP_000098783.1 IS481 family transposase -
AX03_RS25260 () 36754..37314 - 561 WP_001240331.1 recombinase family protein -
AX03_RS25265 () 37521..38261 - 741 WP_001541566.1 carbonic anhydrase -
AX03_RS25270 () 38916..39404 - 489 WP_001135407.1 hypothetical protein -
AX03_RS25275 () 39663..40778 + 1116 WP_001247118.1 DNA-binding protein -
AX03_RS25280 () 40864..41280 + 417 WP_001541564.1 hypothetical protein -
AX03_RS25285 () 41464..41799 + 336 WP_001527010.1 hypothetical protein -
AX03_RS25290 () 41856..42422 + 567 WP_001541562.1 DUF2913 family protein -
AX03_RS25295 () 42454..43395 - 942 WP_000728917.1 Rpn family recombination-promoting nuclease/putative transposase -
AX03_RS25300 () 43810..45015 + 1206 WP_000427676.1 AAA family ATPase -
AX03_RS25305 () 45015..45989 + 975 WP_000064274.1 ParB/RepB/Spo0J family partition protein -
AX03_RS25310 () 46071..47345 - 1275 WP_022743179.1 Y-family DNA polymerase -
AX03_RS25315 () 47345..47767 - 423 WP_000925627.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
AX03_RS25320 () 48278..48748 + 471 WP_000490265.1 hypothetical protein -
AX03_RS25325 () 48741..49097 + 357 WP_000369839.1 hypothetical protein -
AX03_RS25335 () 49479..50159 + 681 WP_000088645.1 DNA methylase -
AX03_RS25340 () 50159..50380 + 222 WP_001109588.1 hypothetical protein -
AX03_RS25345 () 50436..50849 + 414 WP_000990114.1 DUF1380 family protein -
AX03_RS25350 () 50921..51685 + 765 WP_001246548.1 membrane protein -
AX03_RS25360 () 52181..52615 + 435 WP_001200150.1 antirestriction protein -
AX03_RS25365 () 52682..53116 + 435 WP_000274533.1 DUF1380 family protein -
AX03_RS25370 () 53352..53675 + 324 WP_000015983.1 DNA polymerase III subunit theta -
AX03_RS25960 () 53639..53902 + 264 WP_149867530.1 hypothetical protein -
AX03_RS25390 () 54496..55014 + 519 WP_000741240.1 single-stranded DNA-binding protein SSB2 -
AX03_RS25395 () 55069..55311 + 243 WP_000131520.1 DUF905 domain-containing protein -
AX03_RS25400 () 55380..57377 + 1998 WP_000117513.1 ParB/RepB/Spo0J family partition protein -
AX03_RS25405 () 57417..57851 + 435 WP_010999943.1 conjugation system SOS inhibitor PsiB -
AX03_RS25410 () 57848..58585 + 738 WP_000581933.1 plasmid SOS inhibition protein A -
AX03_RS26080 () 58834..58992 + 159 WP_001704449.1 hypothetical protein -
AX03_RS26085 () 59095..59913 + 819 Protein_75 DUF945 domain-containing protein -
AX03_RS25430 () 60224..60694 - 471 WP_001526856.1 transglycosylase SLT domain-containing protein -
AX03_RS25440 () 61109..61489 + 381 WP_001151546.1 relaxosome protein TraM -
AX03_RS25445 () 61682..62368 + 687 WP_000336297.1 PAS domain-containing protein -
AX03_RS25450 () 62463..62690 + 228 WP_001676655.1 conjugal transfer relaxosome protein TraY -
AX03_RS25455 () 62732..63094 + 363 WP_001274201.1 type IV conjugative transfer system pilin TraA -
AX03_RS25460 () 63109..63420 + 312 WP_000012129.1 type IV conjugative transfer system protein TraL -
AX03_RS25465 () 63442..64008 + 567 WP_000399768.1 type IV conjugative transfer system protein TraE -
AX03_RS25470 () 63995..64735 + 741 WP_001230719.1 type-F conjugative transfer system secretin TraK -
AX03_RS25475 () 64735..66156 + 1422 WP_000146700.1 conjugal transfer protein TraB -
AX03_RS25480 () 66146..66742 + 597 WP_000527896.1 conjugal transfer protein TraP -
AX03_RS25485 () 66720..66965 + 246 WP_010999944.1 DUF2689 domain-containing protein -
AX03_RS25490 () 66962..67477 + 516 WP_001079995.1 type IV conjugative transfer system lipoprotein TraV -
AX03_RS25495 () 67612..67833 + 222 WP_001278699.1 conjugal transfer protein TraR -
AX03_RS25500 () 67826..68293 + 468 WP_000549562.1 hypothetical protein -
AX03_RS25505 () 68410..68673 + 264 WP_001239256.1 hypothetical protein -
AX03_RS25510 () 68689..71337 + 2649 WP_000793310.1 type IV secretion system protein TraC -
AX03_RS25515 () 71312..71698 + 387 WP_000105164.1 type-F conjugative transfer system protein TrbI -
AX03_RS25520 () 71695..72327 + 633 WP_000871995.1 type-F conjugative transfer system protein TraW -
AX03_RS25525 () 72324..73316 + 993 WP_000833320.1 conjugal transfer pilus assembly protein TraU -
AX03_RS25530 () 73335..73643 + 309 WP_010999945.1 hypothetical protein -
AX03_RS25535 () 73628..74266 + 639 WP_000554823.1 type-F conjugative transfer system pilin assembly protein TrbC -
AX03_RS25540 () 74303..74722 + 420 WP_001229397.1 HNH endonuclease -
AX03_RS25545 () 74719..76545 + 1827 WP_000827528.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
AX03_RS25550 () 76556..76771 + 216 WP_000700023.1 conjugal transfer protein TrbE -
AX03_RS25555 () 76783..77532 + 750 WP_001226854.1 type-F conjugative transfer system pilin assembly protein TraF -
AX03_RS25560 () 77746..78039 + 294 WP_001233881.1 type-F conjugative transfer system pilin chaperone TraQ -
AX03_RS25565 () 78026..78574 + 549 WP_022743183.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
AX03_RS25570 () 78564..79946 + 1383 WP_001161719.1 conjugal transfer protein TraH -
AX03_RS25575 () 79943..82765 + 2823 WP_001007086.1 conjugal transfer mating pair stabilization protein TraG -
AX03_RS25580 () 82781..83275 + 495 WP_010999946.1 entry exclusion protein -
AX03_RS25585 () 83311..84042 + 732 WP_022743186.1 complement resistance protein TraT -
AX03_RS25590 () 84419..86662 + 2244 WP_031608981.1 type IV conjugative transfer system coupling protein TraD -
AX03_RS25595 () 86671..87069 - 399 WP_000911322.1 tRNA(fMet)-specific endonuclease VapC -
AX03_RS25600 () 87069..87296 - 228 WP_000450265.1 toxin-antitoxin system antitoxin VapB -
AX03_RS25605 () 87378..92636 + 5259 WP_022743192.1 conjugative transfer relaxase/helicase TraI -
AX03_RS25610 () 92656..93396 + 741 WP_000177629.1 conjugal transfer pilus acetylase TraX -
AX03_RS25615 () 93451..94014 + 564 WP_000139307.1 fertility inhibition protein FinO -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance