MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 45958 bp
Accession: NZ_CP014916 Location: 1..45958 Organism: Secundilactobacillus paracollinoides strain TMW 1.1994 Replicon: plasmid pL11994-1
Accession: NZ_CP014916 Location: 1..45958 Organism: Secundilactobacillus paracollinoides strain TMW 1.1994 Replicon: plasmid pL11994-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYR62_RS15480 () | 394..1503 | + | 1110 | WP_065928758.1 | replication initiator protein A | - |
| AYR62_RS15485 () | 1907..2188 | + | 282 | WP_054712998.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| AYR62_RS15490 () | 2235..2420 | + | 186 | WP_010620892.1 | hypothetical protein | - |
| AYR62_RS16760 () | 2424..2546 | + | 123 | Protein_3 | ATPase | - |
| AYR62_RS15495 () | 2536..2814 | - | 279 | WP_065928759.1 | hypothetical protein | - |
| AYR62_RS15500 () | 2837..3064 | - | 228 | WP_003555660.1 | hypothetical protein | - |
| AYR62_RS15505 () | 3316..5376 | + | 2061 | WP_065928760.1 | Mobilization protein A | Relaxase |
| AYR62_RS15510 () | 5462..6758 | + | 1297 | Protein_7 | DNA topoisomerase III | - |
| AYR62_RS16765 () | 6744..7028 | - | 285 | Protein_8 | transposase family protein | - |
| AYR62_RS15515 () | 7398..8096 | - | 699 | WP_054712311.1 | ribose-5-phosphate isomerase RpiA | - |
| AYR62_RS15520 () | 8121..9038 | - | 918 | WP_054712314.1 | ribokinase | - |
| AYR62_RS15525 () | 9183..10198 | - | 1016 | Protein_11 | LacI family DNA-binding transcriptional regulator | - |
| AYR62_RS15530 () | 10333..10728 | + | 396 | WP_054712319.1 | D-ribose pyranase | - |
| AYR62_RS15535 () | 10828..12168 | + | 1341 | WP_054712323.1 | L-fucose:H+ symporter permease | - |
| AYR62_RS15540 () | 12635..13399 | + | 765 | WP_054712325.1 | ISNCY family transposase ISH7A | Transposase |
| AYR62_RS15545 () | 13540..14148 | + | 609 | WP_065928761.1 | ISNCY family transposase ISH7A | Transposase |
| AYR62_RS16770 () | 14273..14431 | - | 159 | Protein_16 | helix-turn-helix transcriptional regulator | - |
| AYR62_RS15555 () | 14603..15865 | - | 1263 | WP_065928762.1 | ABC transporter permease | - |
| AYR62_RS15560 () | 16030..16578 | + | 549 | WP_046870786.1 | TetR/AcrR family transcriptional regulator | - |
| AYR62_RS15565 () | 16960..17547 | + | 588 | WP_065928763.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| AYR62_RS15570 () | 17811..18092 | + | 282 | WP_083224389.1 | IS30 family transposase ISLsa1 | Transposase |
| AYR62_RS16775 () | 18096..18883 | + | 788 | Protein_21 | IS5 family transposase | - |
| AYR62_RS15580 () | 18900..19592 | + | 693 | Protein_22 | IS30 family transposase IS1070 | Transposase |
| AYR62_RS15585 () | 19738..21084 | + | 1347 | WP_065928764.1 | SLC45 family MFS transporter | - |
| AYR62_RS15590 () | 21084..22850 | + | 1767 | WP_065928765.1 | glycoside hydrolase family 13 protein | - |
| AYR62_RS16780 () | 23319..23762 | - | 444 | Protein_25 | transposase | - |
| AYR62_RS15600 () | 23818..23970 | + | 153 | WP_156771284.1 | IS3 family transposase IS153 | Transposase |
| AYR62_RS15605 () | 24076..24966 | + | 891 | Protein_27 | IS3 family transposase ISBce13 | Transposase |
| AYR62_RS15610 () | 25098..26273 | - | 1176 | WP_065928767.1 | IS256 family transposase IS1310 | Transposase |
| AYR62_RS15615 () | 26571..26921 | - | 351 | WP_011222016.1 | DUF5388 domain-containing protein | - |
| AYR62_RS15620 () | 26923..27723 | - | 801 | WP_065928768.1 | Sporulation initiation inhibitor protein Soj | VF |
| AYR62_RS15625 () | 28925..30547 | + | 1623 | WP_065928769.1 | type I restriction-modification system subunit M | - |
| AYR62_RS15630 () | 30537..31715 | + | 1179 | WP_065928770.1 | restriction endonuclease subunit S | - |
| AYR62_RS15635 () | 31825..32169 | - | 345 | WP_001748110.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| AYR62_RS15640 () | 32163..32426 | - | 264 | WP_001748109.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AYR62_RS15645 () | 32512..33099 | + | 588 | WP_041153703.1 | site-specific integrase | - |
| AYR62_RS15650 () | 33552..33851 | + | 300 | Protein_36 | IS30 family transposase IS1139 | Transposase |
| AYR62_RS15655 () | 34341..34799 | + | 459 | WP_065928771.1 | phage terminase small subunit P27 family | - |
| AYR62_RS15660 () | 34952..35371 | - | 420 | WP_065928772.1 | hypothetical protein | - |
| AYR62_RS15665 () | 35671..36015 | - | 345 | WP_156771286.1 | hypothetical protein | - |
| AYR62_RS15670 () | 36387..37421 | + | 1035 | WP_057910131.1 | Putrescine carbamoyltransferase | VF |
| AYR62_RS15675 () | 37469..38821 | + | 1353 | WP_065928774.1 | APC family permease | - |
| AYR62_RS15680 () | 38881..39975 | + | 1095 | WP_065928775.1 | agmatine deiminase | - |
| AYR62_RS15685 () | 40046..41014 | + | 969 | WP_065928776.1 | carbamate kinase | - |
| AYR62_RS16790 () | 41046..41834 | + | 789 | Protein_44 | IS5 family transposase | - |
| AYR62_RS15700 () | 41901..43010 | + | 1110 | WP_065904134.1 | agmatine deiminase | - |
| AYR62_RS15705 () | 43007..43819 | + | 813 | WP_065904136.1 | MurR/RpiR family transcriptional regulator | - |
| AYR62_RS17130 () | 43940..44062 | - | 123 | Protein_47 | IS30 family transposase | - |
| AYR62_RS15710 () | 44345..45136 | + | 792 | WP_057910135.1 | AAA family ATPase | - |
| AYR62_RS15715 () | 45208..45447 | + | 240 | WP_010011603.1 | hypothetical protein | - |
| AYR62_RS15720 () | 45472..45849 | + | 378 | WP_040472813.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|