MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33159 bp
Accession: NZ_CP014894 Location: 1..33159 Organism: Loigolactobacillus backii strain TMW 1.1992 Replicon: plasmid pL11992-4
Accession: NZ_CP014894 Location: 1..33159 Organism: Loigolactobacillus backii strain TMW 1.1992 Replicon: plasmid pL11992-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYR55_RS12570 () | 76..585 | + | 510 | WP_068377452.1 | helix-turn-helix domain-containing protein | - |
| AYR55_RS12575 () | 1470..1817 | + | 348 | WP_082918602.1 | TM2 domain-containing protein | - |
| AYR55_RS12580 () | 2082..2678 | - | 597 | WP_100077695.1 | helix-turn-helix domain-containing protein | - |
| AYR55_RS12585 () | 2867..3076 | + | 210 | WP_068226422.1 | helix-turn-helix domain-containing protein | - |
| AYR55_RS12590 () | 3228..3446 | + | 219 | WP_068377461.1 | hypothetical protein | - |
| AYR55_RS12595 () | 3443..4276 | + | 834 | WP_068377463.1 | bifunctional DNA primase/polymerase | - |
| AYR55_RS12600 () | 4236..5852 | + | 1617 | WP_068377466.1 | DNA primase family protein | - |
| AYR55_RS12605 () | 6153..6566 | + | 414 | WP_068377470.1 | hypothetical protein | - |
| AYR55_RS12610 () | 6725..7183 | - | 459 | Protein_9 | phage terminase small subunit P27 family | - |
| AYR55_RS12615 () | 7674..7973 | - | 300 | Protein_10 | IS30 family transposase IS1139 | Transposase |
| AYR55_RS12620 () | 8426..9013 | - | 588 | WP_033609932.1 | site-specific integrase | - |
| AYR55_RS12625 () | 9099..9362 | + | 264 | WP_003643337.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AYR55_RS12630 () | 9356..9700 | + | 345 | WP_001748110.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| AYR55_RS12635 () | 9810..11042 | - | 1233 | WP_068377478.1 | restriction endonuclease subunit S | - |
| AYR55_RS12640 () | 11032..12654 | - | 1623 | WP_068377481.1 | type I restriction-modification system subunit M | - |
| AYR55_RS12645 () | 12668..15826 | - | 3159 | WP_068377483.1 | type I restriction endonuclease subunit R | - |
| AYR55_RS12650 () | 15977..16906 | - | 930 | WP_068377485.1 | IS30 family transposase ISLpl1 | Transposase |
| AYR55_RS12655 () | 17132..17635 | + | 504 | WP_068377488.1 | DUF536 domain-containing protein | - |
| AYR55_RS12660 () | 18779..19393 | - | 615 | WP_046870699.1 | helix-turn-helix transcriptional regulator | - |
| AYR55_RS12665 () | 19522..19752 | + | 231 | WP_082918601.1 | helix-turn-helix transcriptional regulator | - |
| AYR55_RS12670 () | 19872..20126 | + | 255 | WP_068377494.1 | hypothetical protein | - |
| AYR55_RS12675 () | 20123..20956 | + | 834 | WP_068226438.1 | bifunctional DNA primase/polymerase | - |
| AYR55_RS12680 () | 20916..22523 | + | 1608 | WP_082920266.1 | DNA primase family protein | - |
| AYR55_RS12685 () | 22837..23250 | + | 414 | WP_068377499.1 | hypothetical protein | - |
| AYR55_RS12690 () | 23409..23867 | - | 459 | Protein_25 | phage terminase small subunit P27 family | - |
| AYR55_RS12695 () | 24355..25197 | - | 843 | WP_068377502.1 | IS3 family transposase ISBce13 | Transposase |
| AYR55_RS12700 () | 25251..25502 | - | 252 | WP_068377505.1 | IS3 family transposase IS153 | Transposase |
| AYR55_RS12705 () | 25868..29848 | - | 3981 | WP_178378343.1 | KxYKxGKxW signal peptide domain-containing protein | - |
| AYR55_RS12710 () | 30027..30905 | + | 879 | WP_068377174.1 | IS982 family transposase ISLpl4 | Transposase |
| AYR55_RS12715 () | 30944..31873 | - | 930 | WP_068377508.1 | IS30 family transposase ISLpl1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|