MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 25119 bp
Accession: NZ_CP014800 Location: 1..25119 Organism: Salipiger profundus strain JLT2016 Replicon: plasmid pTPRO4
Accession: NZ_CP014800 Location: 1..25119 Organism: Salipiger profundus strain JLT2016 Replicon: plasmid pTPRO4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Ga0080559_RS23910 () | 245..580 | + | 336 | WP_076625763.1 | hypothetical protein | - |
| Ga0080559_RS26450 () | 654..848 | - | 195 | WP_128549269.1 | IS5 family transposase ISHph1 | Transposase |
| Ga0080559_RS23915 () | 1096..2346 | + | 1251 | WP_076625764.1 | IS1380 family transposase ISPsp9 | Transposase |
| Ga0080559_RS23920 () | 2936..4426 | + | 1491 | WP_157895897.1 | hypothetical protein | Relaxase |
| Ga0080559_RS23925 () | 4696..5013 | - | 318 | WP_076625766.1 | hypothetical protein | - |
| Ga0080559_RS23930 () | 5016..5417 | - | 402 | WP_076625767.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| Ga0080559_RS23935 () | 5414..5677 | - | 264 | WP_076625768.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| Ga0080559_RS26455 () | 5862..6020 | - | 159 | WP_157895898.1 | hypothetical protein | - |
| Ga0080559_RS23940 () | 6264..7295 | + | 1032 | WP_076625769.1 | replication initiator protein A | - |
| Ga0080559_RS23945 () | 7490..7741 | + | 252 | WP_076625770.1 | helix-turn-helix domain-containing protein | - |
| Ga0080559_RS23950 () | 7909..8118 | - | 210 | WP_076625771.1 | hypothetical protein | - |
| Ga0080559_RS23955 () | 8108..8770 | - | 663 | WP_076625772.1 | AAA family ATPase | - |
| Ga0080559_RS23960 () | 8991..9239 | - | 249 | WP_076625773.1 | HigA family addiction module antidote protein | - |
| Ga0080559_RS23965 () | 9759..9941 | + | 183 | WP_093412561.1 | hypothetical protein | - |
| Ga0080559_RS23970 () | 10347..10874 | + | 528 | Protein_15 | IS30 family transposase ISRssp4 | Transposase |
| Ga0080559_RS23975 () | 10950..11717 | - | 768 | WP_076625775.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| Ga0080559_RS23980 () | 11944..13536 | + | 1593 | WP_076625776.1 | glycerol-3-phosphate dehydrogenase | - |
| Ga0080559_RS23985 () | 13568..14656 | + | 1089 | WP_076625777.1 | ABC transporter ATP-binding protein | - |
| Ga0080559_RS23990 () | 14671..15744 | + | 1074 | WP_076625778.1 | ABC transporter ATP-binding protein | - |
| Ga0080559_RS23995 () | 15797..16666 | + | 870 | WP_076625779.1 | sugar ABC transporter permease | - |
| Ga0080559_RS24000 () | 16668..17531 | + | 864 | WP_179949499.1 | carbohydrate ABC transporter permease | - |
| Ga0080559_RS24005 () | 17750..18025 | + | 276 | WP_076625780.1 | DUF2160 domain-containing protein | - |
| Ga0080559_RS24010 () | 18088..19803 | + | 1716 | WP_076625781.1 | ABC transporter substrate-binding protein | - |
| Ga0080559_RS24015 () | 19902..21398 | + | 1497 | WP_076625782.1 | glycerol kinase GlpK | - |
| Ga0080559_RS24020 () | 21545..22132 | - | 588 | WP_076625761.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|