MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 126548 bp
Accession: NZ_CP014798 Location: 1..126548 Organism: Salipiger profundus strain JLT2016 Replicon: plasmid pTPRO2
Accession: NZ_CP014798 Location: 1..126548 Organism: Salipiger profundus strain JLT2016 Replicon: plasmid pTPRO2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Ga0080559_RS23115 () | 39..692 | + | 654 | WP_028288610.1 | hypothetical protein | - |
| Ga0080559_RS23120 () | 817..1143 | + | 327 | WP_005668772.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| Ga0080559_RS23125 () | 1140..1658 | + | 519 | WP_076625726.1 | type II toxin-antitoxin system YhaV family toxin | - |
| Ga0080559_RS26690 () | 1753..1917 | + | 165 | WP_009819683.1 | hypothetical protein | - |
| Ga0080559_RS23130 () | 1907..2059 | + | 153 | WP_043754116.1 | hypothetical protein | - |
| Ga0080559_RS23135 () | 2162..6424 | + | 4263 | WP_076625727.1 | strawberry notch family protein | - |
| Ga0080559_RS23140 () | 6546..6932 | + | 387 | WP_076625728.1 | hypothetical protein | - |
| Ga0080559_RS23145 () | 6934..7395 | + | 462 | WP_028288607.1 | hypothetical protein | - |
| Ga0080559_RS23150 () | 7496..7798 | + | 303 | WP_028288606.1 | hypothetical protein | - |
| Ga0080559_RS23155 () | 7923..8651 | + | 729 | WP_076625729.1 | DUF736 family protein | - |
| Ga0080559_RS23160 () | 8857..10413 | - | 1557 | WP_043754109.1 | hypothetical protein | - |
| Ga0080559_RS23165 () | 10410..12359 | - | 1950 | WP_043754103.1 | TIR domain-containing protein | - |
| Ga0080559_RS23170 () | 13098..14027 | + | 930 | WP_076625730.1 | DUF2493 domain-containing protein | - |
| Ga0080559_RS26025 () | 14260..15336 | + | 1077 | WP_081979701.1 | SH3 domain-containing protein | - |
| Ga0080559_RS23180 () | 15695..15901 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| Ga0080559_RS23185 () | 16453..17046 | + | 594 | WP_043754095.1 | transposase | - |
| Ga0080559_RS23190 () | 17033..19366 | + | 2334 | WP_076625732.1 | T-DNA border endonuclease VirD2 | Relaxase |
| Ga0080559_RS23195 () | 19375..21369 | + | 1995 | WP_043754090.1 | type IV secretory system conjugative DNA transfer family protein | - |
| Ga0080559_RS23200 () | 21373..22167 | - | 795 | WP_043754087.1 | hypothetical protein | - |
| Ga0080559_RS23205 () | 22245..23387 | + | 1143 | WP_043754083.1 | exonuclease SbcCD subunit D | - |
| Ga0080559_RS23210 () | 23384..26458 | + | 3075 | WP_076625733.1 | SMC family ATPase | - |
| Ga0080559_RS23215 () | 26606..26854 | - | 249 | Protein_21 | IS5 family transposase ISPko1 | Transposase |
| Ga0080559_RS23220 () | 26866..29100 | - | 2235 | Protein_22 | type IV secretion system DNA-binding domain-containing protein | - |
| Ga0080559_RS23225 () | 29090..29368 | - | 279 | WP_008282962.1 | hypothetical protein | VF |
| Ga0080559_RS23230 () | 29361..29654 | - | 294 | WP_008282963.1 | Type IV secretion system protein virB2 | VF |
| Ga0080559_RS23235 () | 29651..30265 | - | 615 | WP_017469729.1 | lytic transglycosylase domain-containing protein | - |
| Ga0080559_RS23240 () | 30309..30677 | - | 369 | WP_008327368.1 | hypothetical protein | - |
| Ga0080559_RS23245 () | 30888..31139 | + | 252 | WP_008327366.1 | hypothetical protein | - |
| Ga0080559_RS23250 () | 31264..31521 | + | 258 | WP_017470289.1 | helix-turn-helix transcriptional regulator | - |
| Ga0080559_RS23260 () | 32039..32734 | - | 696 | WP_173674657.1 | hypothetical protein | - |
| Ga0080559_RS23265 () | 33088..33399 | - | 312 | WP_007803481.1 | STAS/SEC14 domain-containing protein | - |
| Ga0080559_RS23270 () | 33371..34336 | - | 966 | WP_007803480.1 | cation diffusion facilitator family transporter | - |
| Ga0080559_RS23275 () | 34326..34889 | - | 564 | WP_007803479.1 | transglutaminase-like domain-containing protein | - |
| Ga0080559_RS23280 () | 34959..35579 | - | 621 | WP_008327361.1 | cation diffusion facilitator family transporter | - |
| Ga0080559_RS23285 () | 35662..36090 | - | 429 | WP_007803476.1 | IS607 family transposase ISChh1 | Transposase |
| Ga0080559_RS23290 () | 36304..36870 | + | 567 | WP_007803475.1 | SCO family protein | - |
| Ga0080559_RS23295 () | 36876..37298 | + | 423 | WP_007803474.1 | disulfide bond formation protein B | - |
| Ga0080559_RS23300 () | 37295..37954 | + | 660 | WP_007803472.1 | thioredoxin domain-containing protein | - |
| Ga0080559_RS23305 () | 37980..38447 | + | 468 | WP_028288644.1 | copper chaperone PCu(A)C | - |
| Ga0080559_RS23310 () | 38447..39073 | + | 627 | WP_007803468.1 | SCO family protein | - |
| Ga0080559_RS23315 () | 39070..40443 | + | 1374 | WP_007803467.1 | M23 family metallopeptidase | - |
| Ga0080559_RS23320 () | 40447..40905 | + | 459 | WP_007803465.1 | DUF411 domain-containing protein | - |
| Ga0080559_RS23325 () | 40928..41710 | + | 783 | WP_007803463.1 | ZIP family metal transporter | - |
| Ga0080559_RS23330 () | 41715..42188 | + | 474 | WP_007803461.1 | Lipoprotein signal peptidase | VF |
| Ga0080559_RS23335 () | 42185..43756 | + | 1572 | WP_076625734.1 | apolipoprotein N-acyltransferase | - |
| Ga0080559_RS26695 () | 43756..43923 | + | 168 | WP_007803456.1 | hypothetical protein | - |
| Ga0080559_RS23340 () | 44018..44476 | - | 459 | WP_008327326.1 | Transcriptional regulator MntR | VF |
| Ga0080559_RS23345 () | 44592..44849 | + | 258 | WP_007803452.1 | hypothetical protein | - |
| Ga0080559_RS23350 () | 44843..47029 | - | 2187 | WP_007803450.1 | cation-translocating P-type ATPase | - |
| Ga0080559_RS23355 () | 47390..47662 | + | 273 | WP_012187176.1 | hypothetical protein | - |
| Ga0080559_RS23360 () | 47710..48375 | - | 666 | WP_007803448.1 | L,D-transpeptidase | - |
| Ga0080559_RS23365 () | 48569..49291 | - | 723 | WP_007803446.1 | cytochrome C biogenesis protein CcdA | - |
| Ga0080559_RS26440 () | 49279..49398 | - | 120 | Protein_52 | IS5/IS1182 family transposase | - |
| Ga0080559_RS23370 () | 49508..50152 | + | 645 | WP_007803445.1 | hypothetical protein | - |
| Ga0080559_RS23375 () | 50160..51497 | - | 1338 | WP_007803442.1 | APC family permease | - |
| Ga0080559_RS23380 () | 51546..53783 | - | 2238 | WP_173585994.1 | copper-translocating P-type ATPase | - |
| Ga0080559_RS23385 () | 53970..54890 | - | 921 | WP_007803438.1 | prolipoprotein diacylglyceryl transferase | - |
| Ga0080559_RS23390 () | 54996..55382 | - | 387 | WP_007803435.1 | DUF302 domain-containing protein | - |
| Ga0080559_RS23395 () | 55523..56011 | - | 489 | WP_008327312.1 | hypothetical protein | - |
| Ga0080559_RS23400 () | 56475..57086 | + | 612 | WP_007803430.1 | hypothetical protein | - |
| Ga0080559_RS23405 () | 57177..57587 | + | 411 | WP_076623780.1 | IS66 family transposase ISUnCu14 | Transposase |
| Ga0080559_RS23410 () | 57581..57934 | + | 354 | WP_076623781.1 | IS66 family transposase ISRel8 | Transposase |
| Ga0080559_RS23415 () | 57989..59539 | + | 1551 | WP_076623782.1 | IS66 family transposase ISRel8 | Transposase |
| Ga0080559_RS23420 () | 59647..60312 | - | 666 | WP_012187180.1 | L,D-transpeptidase | - |
| Ga0080559_RS23425 () | 60355..60840 | - | 486 | WP_008327308.1 | disulfide bond formation protein B | - |
| Ga0080559_RS23430 () | 60981..61691 | - | 711 | Protein_65 | multicopper oxidase domain-containing protein | - |
| Ga0080559_RS23435 () | 61988..63514 | + | 1527 | WP_066817136.1 | IS21 family transposase ISBj11 | Transposase |
| Ga0080559_RS23440 () | 63511..64377 | + | 867 | WP_017467646.1 | IS21 family transposase ISRel5 | Transposase |
| Ga0080559_RS23445 () | 64527..65291 | + | 765 | WP_012187037.1 | glutaredoxin | - |
| Ga0080559_RS23450 () | 65313..65711 | - | 399 | WP_007803416.1 | Cu(I)-responsive transcriptional regulator | - |
| Ga0080559_RS23455 () | 65724..68234 | - | 2511 | WP_007803414.1 | heavy metal translocating P-type ATPase | - |
| Ga0080559_RS23460 () | 68387..68587 | + | 201 | WP_007803412.1 | heavy-metal-associated domain-containing protein | - |
| Ga0080559_RS23465 () | 68630..69361 | - | 732 | WP_009807488.1 | DsbA family protein | - |
| Ga0080559_RS23470 () | 69363..69845 | - | 483 | WP_007803408.1 | cytochrome c | - |
| Ga0080559_RS23475 () | 69842..71236 | - | 1395 | WP_007803406.1 | multicopper oxidase family protein | - |
| Ga0080559_RS23480 () | 71280..72197 | - | 918 | WP_007803405.1 | cytochrome c | - |
| Ga0080559_RS23485 () | 72200..72793 | - | 594 | WP_007803403.1 | cytochrome c | - |
| Ga0080559_RS23490 () | 73163..73621 | - | 459 | WP_007803401.1 | cytochrome c | - |
| Ga0080559_RS23495 () | 73650..74210 | - | 561 | Protein_78 | L,D-transpeptidase | - |
| Ga0080559_RS23500 () | 74366..74668 | + | 303 | WP_007803398.1 | DUF2933 domain-containing protein | - |
| Ga0080559_RS23505 () | 74952..77081 | + | 2130 | WP_009807485.1 | thioredoxin family protein | - |
| Ga0080559_RS23510 () | 77110..78261 | - | 1152 | WP_008327282.1 | c-type cytochrome biogenesis protein CcmI | - |
| Ga0080559_RS23515 () | 78258..78731 | - | 474 | WP_009807484.1 | cytochrome c-type biogenesis protein CcmH | - |
| Ga0080559_RS23520 () | 78728..79294 | - | 567 | WP_009807483.1 | DsbE family thiol:disulfide interchange protein | - |
| Ga0080559_RS23525 () | 79303..81303 | - | 2001 | WP_012187039.1 | Cytochrome c-type biogenesis protein CcmF | VF |
| Ga0080559_RS23530 () | 81369..81560 | - | 192 | WP_009807481.1 | SHOCT domain-containing protein | - |
| Ga0080559_RS23535 () | 81610..83076 | - | 1467 | WP_076625735.1 | HAMP domain-containing protein | - |
| Ga0080559_RS23540 () | 83076..83798 | - | 723 | WP_007803380.1 | Transcriptional regulatory protein OmpR | VF |
| Ga0080559_RS23545 () | 83987..84460 | + | 474 | WP_008327269.1 | rhodanese-like domain-containing protein | - |
| Ga0080559_RS23550 () | 84501..84986 | + | 486 | WP_008327268.1 | hypothetical protein | - |
| Ga0080559_RS23555 () | 85148..85597 | + | 450 | WP_008327267.1 | hypothetical protein | - |
| Ga0080559_RS23560 () | 85601..86263 | + | 663 | WP_008327266.1 | TVP38/TMEM64 family protein | - |
| Ga0080559_RS23565 () | 86265..87245 | + | 981 | WP_009807478.1 | cation diffusion facilitator family transporter | - |
| Ga0080559_RS23570 () | 87242..88033 | - | 792 | WP_040610016.1 | TniQ family protein | - |
| Ga0080559_RS23575 () | 88030..88911 | - | 882 | WP_038147410.1 | TniB family NTP-binding protein | - |
| Ga0080559_RS23580 () | 88913..90547 | - | 1635 | WP_128549244.1 | Mu transposase C-terminal domain-containing protein | - |
| Ga0080559_RS23590 () | 90818..92269 | - | 1452 | WP_009807474.1 | mercury(II) reductase | - |
| Ga0080559_RS23595 () | 92327..93676 | - | 1350 | WP_008335974.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| Ga0080559_RS23600 () | 93740..93970 | - | 231 | WP_050759304.1 | mercury resistance system transport protein MerF | - |
| Ga0080559_RS23605 () | 94068..94370 | - | 303 | WP_008335977.1 | hypothetical protein | - |
| Ga0080559_RS23610 () | 94387..94692 | - | 306 | WP_009807473.1 | hypothetical protein | - |
| Ga0080559_RS23615 () | 94705..95112 | - | 408 | WP_176244179.1 | mercury transporter | - |
| Ga0080559_RS23620 () | 95209..95610 | + | 402 | WP_008335980.1 | helix-turn-helix domain-containing protein | - |
| Ga0080559_RS23625 () | 95940..97007 | - | 1068 | WP_008335981.1 | hypothetical protein | - |
| Ga0080559_RS23630 () | 97235..98119 | + | 885 | WP_028288628.1 | Tn3 family transposase ISPsy42 | Transposase |
| Ga0080559_RS23635 () | 98198..98593 | - | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| Ga0080559_RS23640 () | 98583..98810 | - | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| Ga0080559_RS23645 () | 99019..100212 | + | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| Ga0080559_RS23650 () | 100196..101128 | + | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| Ga0080559_RS23655 () | 101342..102553 | + | 1212 | WP_076625738.1 | replication initiation protein RepC | - |
| Ga0080559_RS23660 () | 102722..104440 | + | 1719 | Protein_110 | ParB N-terminal domain-containing protein | - |
| Ga0080559_RS23665 () | 104640..106007 | - | 1368 | WP_028288624.1 | HAMP domain-containing protein | - |
| Ga0080559_RS23670 () | 106004..106663 | - | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| Ga0080559_RS23675 () | 106809..107126 | + | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| Ga0080559_RS23680 () | 107083..108468 | + | 1386 | WP_076625739.1 | ferredoxin reductase family protein | - |
| Ga0080559_RS23685 () | 108649..109029 | + | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| Ga0080559_RS23690 () | 109065..109535 | + | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| Ga0080559_RS23695 () | 109547..111754 | + | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| Ga0080559_RS23700 () | 111735..112715 | + | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| Ga0080559_RS23705 () | 112721..114628 | + | 1908 | WP_036540305.1 | cadmium-translocating P-type ATPase | - |
| Ga0080559_RS23710 () | 114625..115326 | + | 702 | WP_028288616.1 | VIT family protein | - |
| Ga0080559_RS23715 () | 115399..115623 | + | 225 | Protein_121 | hypothetical protein | - |
| Ga0080559_RS23720 () | 115652..115945 | - | 294 | WP_028288615.1 | hypothetical protein | - |
| Ga0080559_RS23725 () | 116298..116768 | + | 471 | WP_028288614.1 | hypothetical protein | - |
| Ga0080559_RS23730 () | 116809..117747 | + | 939 | WP_028288613.1 | DUF1738 domain-containing protein | - |
| Ga0080559_RS23735 () | 117771..117980 | + | 210 | WP_017469169.1 | hypothetical protein | - |
| Ga0080559_RS23740 () | 118068..118457 | + | 390 | WP_028288612.1 | DUF3768 domain-containing protein | - |
| Ga0080559_RS23745 () | 118617..120599 | + | 1983 | WP_028288611.1 | ParB/RepB/Spo0J family partition protein | - |
| Ga0080559_RS23750 () | 120676..121269 | + | 594 | WP_025042408.1 | hypothetical protein | - |
| Ga0080559_RS26030 () | 121402..121656 | + | 255 | Protein_129 | IS110 family transposase ISPko7 | Transposase |
| Ga0080559_RS23760 () | 121822..123054 | + | 1233 | WP_076622776.1 | IS91 family transposase ISAzo26 | Transposase |
| Ga0080559_RS23765 () | 123051..124421 | + | 1371 | WP_076622777.1 | tyrosine-type recombinase/integrase | - |
| Ga0080559_RS23770 () | 124418..125422 | + | 1005 | WP_076622778.1 | Tyrosine recombinase XerC | VF |
| Ga0080559_RS23775 () | 125507..126283 | + | 777 | Protein_133 | IS110 family transposase ISMdi12 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|