MGE detailed information
MGE type: Conjugative plasmid MGE length: 113852 bp
Accession: NZ_CP014669 Location: 1..113852 Organism: Escherichia coli strain ECONIH2 Replicon: plasmid pKpQIL-571
Accession: NZ_CP014669 Location: 1..113852 Organism: Escherichia coli strain ECONIH2 Replicon: plasmid pKpQIL-571
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WM48_RS29520 () | 161..763 | + | 603 | WP_015060010.1 | hypothetical protein | - |
| WM48_RS25735 () | 813..1457 | + | 645 | WP_004153014.1 | hypothetical protein | - |
| WM48_RS25740 () | 1513..2163 | + | 651 | WP_004152382.1 | DUF2726 domain-containing protein | - |
| WM48_RS25745 () | 2160..2468 | + | 309 | WP_004152383.1 | hypothetical protein | - |
| WM48_RS25750 () | 2644..3123 | + | 480 | WP_014343478.1 | Phospholipase D | VF |
| WM48_RS25755 () | 3241..3510 | + | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| WM48_RS28270 () | 3742..3819 | + | 78 | WP_004171450.1 | RepA leader peptide Tap | - |
| WM48_RS25760 () | 3812..4669 | + | 858 | WP_004152386.1 | incFII family plasmid replication initiator RepA | - |
| WM48_RS25765 () | 5888..6451 | + | 564 | WP_004152388.1 | hypothetical protein | - |
| WM48_RS25770 () | 6435..7046 | + | 612 | WP_004152389.1 | DUF2913 family protein | - |
| WM48_RS29760 () | 7255..7416 | - | 162 | WP_004152390.1 | hypothetical protein | - |
| WM48_RS25775 () | 7443..8435 | - | 993 | WP_001145103.1 | hypothetical protein | - |
| WM48_RS29765 () | 8484..8639 | - | 156 | WP_001404092.1 | hypothetical protein | - |
| WM48_RS25780 () | 8934..10649 | - | 1716 | WP_004152391.1 | Tn3-like element Tn4401 family resolvase TnpR | - |
| WM48_RS25785 () | 10759..13788 | + | 3030 | WP_004152392.1 | Tn3 family transposase ISPsy42 | Transposase |
| WM48_RS28280 () | 13895..14920 | + | 1026 | WP_004199214.1 | IS21 family transposase ISKpn7 | Transposase |
| WM48_RS25795 () | 14917..15696 | + | 780 | WP_004152394.1 | IS21 family transposase ISKpn7 | Transposase |
| WM48_RS25805 () | 15984..16865 | + | 882 | WP_004152396.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| WM48_RS25810 () | 17115..18434 | - | 1320 | WP_004152397.1 | IS1182 family transposase ISKpn6 | Transposase |
| WM48_RS25815 () | 18711..19895 | - | 1185 | WP_004152398.1 | ISAs1 family transposase ISKpn31 | Transposase |
| WM48_RS25820 () | 19997..20227 | + | 231 | Protein_20 | IS5 family transposase ISAeme7 | Transposase |
| WM48_RS25825 () | 20399..20758 | + | 360 | WP_004152400.1 | DUF305 domain-containing protein | - |
| WM48_RS25830 () | 21415..21825 | - | 411 | WP_004152401.1 | hypothetical protein | - |
| WM48_RS25835 () | 21924..22544 | - | 621 | WP_004152402.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| WM48_RS25840 () | 22633..25530 | - | 2898 | WP_023307208.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| WM48_RS25845 () | 25625..26230 | + | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| WM48_RS25850 () | 26890..28071 | + | 1182 | WP_004194048.1 | Na+/H+ antiporter NhaA | - |
| WM48_RS25855 () | 28498..28812 | - | 315 | WP_000091613.1 | hypothetical protein | - |
| WM48_RS25860 () | 29067..29423 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| WM48_RS25865 () | 29413..29814 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| WM48_RS25870 () | 29811..30101 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| WM48_RS25875 () | 30176..33142 | + | 2967 | WP_003100881.1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| WM48_RS25880 () | 33221..34225 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| WM48_RS25885 () | 34407..34610 | - | 204 | WP_004197809.1 | hypothetical protein | - |
| WM48_RS25890 () | 34624..34827 | - | 204 | WP_004197808.1 | hemolysin expression modulator Hha | - |
| WM48_RS25895 () | 34861..35229 | - | 369 | WP_004197807.1 | hypothetical protein | - |
| WM48_RS25900 () | 35273..35767 | - | 495 | WP_020805591.1 | hypothetical protein | - |
| WM48_RS25905 () | 35798..36370 | - | 573 | WP_020805590.1 | hypothetical protein | - |
| WM48_RS25910 () | 36367..36615 | - | 249 | WP_000272716.1 | hypothetical protein | - |
| WM48_RS25915 () | 37052..37741 | + | 690 | WP_020315560.1 | RES family NAD+ phosphorylase | - |
| WM48_RS25920 () | 37773..38462 | - | 690 | WP_004193995.1 | hypothetical protein | - |
| WM48_RS29530 () | 38602..38847 | + | 246 | Protein_41 | hypothetical protein | - |
| WM48_RS25925 () | 39017..39235 | + | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| WM48_RS25930 () | 39237..39542 | + | 306 | WP_001568026.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| WM48_RS25935 () | 39711..40106 | + | 396 | WP_072158608.1 | hypothetical protein | - |
| WM48_RS29535 () | 40133..40456 | + | 324 | WP_022644730.1 | hypothetical protein | - |
| WM48_RS25945 () | 40453..41469 | + | 1017 | WP_020315256.1 | hypothetical protein | - |
| WM48_RS25950 () | 41804..43072 | - | 1269 | WP_019705993.1 | ISL3 family transposase ISKpn25 | Transposase |
| WM48_RS25955 () | 43077..46334 | - | 3258 | WP_019705992.1 | type I restriction endonuclease subunit R | - |
| WM48_RS25960 () | 46335..47609 | - | 1275 | WP_032436768.1 | restriction endonuclease subunit S | - |
| WM48_RS25965 () | 47606..49633 | - | 2028 | WP_019706038.1 | type I restriction-modification system subunit M | - |
| WM48_RS25970 () | 49745..49960 | - | 216 | WP_004227314.1 | hypothetical protein | - |
| WM48_RS25975 () | 50185..50517 | - | 333 | WP_004152347.1 | hypothetical protein | - |
| WM48_RS25980 () | 50894..51868 | - | 975 | WP_004152348.1 | ParB/RepB/Spo0J family partition protein | - |
| WM48_RS25985 () | 51865..53070 | - | 1206 | WP_004152349.1 | Plasmid partition protein A | VF |
| WM48_RS25990 () | 53392..54288 | - | 897 | WP_004152350.1 | RepB family plasmid replication initiator protein | - |
| WM48_RS25995 () | 54689..55960 | - | 1272 | WP_004152351.1 | Y-family DNA polymerase | - |
| WM48_RS26000 () | 55960..56391 | - | 432 | WP_004152352.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| WM48_RS26005 () | 56623..57594 | + | 972 | WP_004152353.1 | mediator of plasmid stability | - |
| WM48_RS26010 () | 57597..58268 | + | 672 | WP_004152354.1 | plasmid partitioning/stability family protein | - |
| WM48_RS26015 () | 58329..58559 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| WM48_RS26020 () | 58996..59697 | + | 702 | WP_004152355.1 | DNA methylase | - |
| WM48_RS26025 () | 59697..59918 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| WM48_RS26030 () | 59928..60347 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| WM48_RS26035 () | 60401..61168 | + | 768 | WP_001568044.1 | hypothetical protein | - |
| WM48_RS26040 () | 61848..62276 | + | 429 | WP_004152356.1 | antirestriction protein | - |
| WM48_RS26045 () | 62319..62825 | + | 507 | WP_001568046.1 | antirestriction protein ArdA | - |
| WM48_RS26050 () | 62868..63059 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| WM48_RS26055 () | 63247..63501 | + | 255 | WP_004152357.1 | DNA polymerase III subunit theta | - |
| WM48_RS26060 () | 63536..63853 | + | 318 | WP_004118473.1 | hypothetical protein | - |
| WM48_RS26065 () | 64637..64864 | + | 228 | WP_004152790.1 | hypothetical protein | - |
| WM48_RS26070 () | 64956..65186 | + | 231 | WP_001568051.1 | hypothetical protein | - |
| WM48_RS26075 () | 65238..66593 | + | 1356 | WP_013054814.1 | DUF3560 domain-containing protein | - |
| WM48_RS26080 () | 66641..67204 | + | 564 | WP_004152756.1 | methyltransferase | - |
| WM48_RS26085 () | 68035..68547 | + | 513 | WP_004152654.1 | single-stranded DNA-binding protein | - |
| WM48_RS26090 () | 68595..68837 | + | 243 | WP_004152655.1 | DUF905 domain-containing protein | - |
| WM48_RS26095 () | 68906..70915 | + | 2010 | WP_004152656.1 | ParB/RepB/Spo0J family partition protein | - |
| WM48_RS26100 () | 70961..71392 | + | 432 | WP_004152657.1 | conjugation system SOS inhibitor PsiB | - |
| WM48_RS26105 () | 71389..72111 | + | 723 | WP_004152658.1 | plasmid SOS inhibition protein A | - |
| WM48_RS29540 () | 72115..72438 | + | 324 | WP_004199367.1 | hypothetical protein | - |
| WM48_RS26115 () | 72549..72908 | + | 360 | WP_004152660.1 | hypothetical protein | - |
| WM48_RS26120 () | 72956..73228 | + | 273 | WP_004152661.1 | hypothetical protein | - |
| WM48_RS26125 () | 73225..73575 | + | 351 | WP_004153414.1 | hypothetical protein | - |
| WM48_RS26135 () | 74205..74558 | + | 354 | WP_004152748.1 | hypothetical protein | - |
| WM48_RS26140 () | 74615..74962 | + | 348 | WP_004152749.1 | hypothetical protein | - |
| WM48_RS26145 () | 75057..75203 | + | 147 | WP_004152750.1 | hypothetical protein | - |
| WM48_RS26150 () | 75254..76087 | + | 834 | WP_004152751.1 | type I restriction-modification system subunit M | - |
| WM48_RS26155 () | 76907..77728 | + | 822 | WP_004152492.1 | DUF945 domain-containing protein | - |
| WM48_RS26160 () | 77761..78090 | + | 330 | WP_011977736.1 | hypothetical protein | - |
| WM48_RS26165 () | 78123..78608 | - | 486 | WP_001568108.1 | hypothetical protein | VF |
| WM48_RS26170 () | 79030..79428 | + | 399 | WP_004152493.1 | relaxosome protein TraM | - |
| WM48_RS26175 () | 79602..80288 | + | 687 | WP_004152494.1 | transcriptional regulator TraJ family protein | - |
| WM48_RS26180 () | 80367..80753 | + | 387 | WP_004152495.1 | TraY domain-containing protein | - |
| WM48_RS26185 () | 80807..81175 | + | 369 | WP_004152496.1 | type IV conjugative transfer system pilin TraA | - |
| WM48_RS26190 () | 81189..81494 | + | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| WM48_RS26195 () | 81514..82080 | + | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| WM48_RS26200 () | 82067..82807 | + | 741 | WP_004152497.1 | type-F conjugative transfer system secretin TraK | - |
| WM48_RS26205 () | 82807..84231 | + | 1425 | WP_004155033.1 | conjugal transfer protein TraB | - |
| WM48_RS26210 () | 84345..84929 | + | 585 | WP_004161368.1 | type IV conjugative transfer system lipoprotein TraV | - |
| WM48_RS26215 () | 85061..85471 | + | 411 | WP_004152499.1 | hypothetical protein | - |
| WM48_RS26220 () | 85577..85795 | + | 219 | WP_004152501.1 | hypothetical protein | - |
| WM48_RS26225 () | 85796..86107 | + | 312 | WP_004152502.1 | hypothetical protein | - |
| WM48_RS26230 () | 86174..86578 | + | 405 | WP_004152503.1 | hypothetical protein | - |
| WM48_RS26235 () | 86621..87010 | + | 390 | WP_004153076.1 | hypothetical protein | - |
| WM48_RS26240 () | 87018..87416 | + | 399 | WP_011977783.1 | hypothetical protein | - |
| WM48_RS26245 () | 87488..90127 | + | 2640 | WP_004152505.1 | type IV secretion system protein TraC | - |
| WM48_RS26250 () | 90127..90516 | + | 390 | WP_004152506.1 | type-F conjugative transfer system protein TrbI | - |
| WM48_RS26255 () | 90516..91142 | + | 627 | WP_004152507.1 | type-F conjugative transfer system protein TraW | - |
| WM48_RS26260 () | 91184..91573 | + | 390 | WP_004152508.1 | hypothetical protein | - |
| WM48_RS26265 () | 91570..92559 | + | 990 | WP_011977785.1 | conjugal transfer pilus assembly protein TraU | - |
| WM48_RS26270 () | 92572..93210 | + | 639 | WP_004152672.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| WM48_RS26275 () | 93269..95224 | + | 1956 | WP_004152673.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| WM48_RS26280 () | 95256..95510 | + | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| WM48_RS26285 () | 95488..95736 | + | 249 | WP_004152675.1 | hypothetical protein | - |
| WM48_RS26290 () | 95749..96075 | + | 327 | WP_004152676.1 | hypothetical protein | - |
| WM48_RS26295 () | 96096..96848 | + | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| WM48_RS26300 () | 96859..97098 | + | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| WM48_RS26305 () | 97070..97627 | + | 558 | WP_004152678.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| WM48_RS26310 () | 97673..98116 | + | 444 | WP_004152679.1 | F-type conjugal transfer protein TrbF | - |
| WM48_RS26315 () | 98094..99473 | + | 1380 | WP_004165169.1 | conjugal transfer protein TraH | - |
| WM48_RS26320 () | 99473..102322 | + | 2850 | WP_004152624.1 | conjugal transfer mating pair stabilization protein TraG | - |
| WM48_RS26325 () | 102335..102883 | + | 549 | WP_004152623.1 | conjugal transfer entry exclusion protein TraS | - |
| WM48_RS26330 () | 103067..103798 | + | 732 | WP_004152622.1 | complement resistance protein TraT | - |
| WM48_RS29770 () | 103990..104679 | + | 690 | WP_004198206.1 | hypothetical protein | - |
| WM48_RS26340 () | 104808..107120 | + | 2313 | Protein_124 | type IV conjugative transfer system coupling protein TraD | - |
| WM48_RS26345 () | 107120..112381 | + | 5262 | WP_004153015.1 | Multifunctional conjugation protein TraI | Relaxase |
| WM48_RS26350 () | 112462..113187 | + | 726 | WP_004152379.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| WM48_RS26355 () | 113259..113852 | + | 594 | WP_004152380.1 | fertility inhibition protein FinO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|