MGE detailed information
MGE type: Genomic_island MGE length: 57264 bp
Accession: NZ_CP014642 Location: 4073107..4130370 Organism: Escherichia coli strain BLK16 Replicon: chromosome
Accession: NZ_CP014642 Location: 4073107..4130370 Organism: Escherichia coli strain BLK16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYR48_RS20610 (4068258) | 4068258..4069172 | - | 915 | WP_000648577.1 | DNA-binding transcriptional regulator YafC | - |
| AYR48_RS20615 (4069413) | 4069413..4070213 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| AYR48_RS20620 (4070244) | 4070244..4070840 | + | 597 | Protein_3771 | methyltransferase domain-containing protein | - |
| AYR48_RS20625 (4070888) | 4070888..4072246 | - | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| AYR48_RS20630 (4072318) | 4072318..4073073 | - | 756 | WP_001052717.1 | hydroxyacylglutathione hydrolase | - |
| AYR48_RS20635 (4073107) | 4073107..4073829 | + | 723 | WP_001297210.1 | class I SAM-dependent methyltransferase | - |
| AYR48_RS20640 (4073826) | 4073826..4074293 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| AYR48_RS20645 (4074358) | 4074358..4075089 | + | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| AYR48_RS20655 (4075628) | 4075628..4076413 | + | 786 | WP_001053631.1 | hypothetical protein | - |
| AYR48_RS21640 (4076550) | 4076550..4076621 | - | 72 | Protein_3778 | hypothetical protein | - |
| AYR48_RS20665 (4076679) | 4076679..4077383 | + | 705 | Protein_3779 | IS1 family transposase IS1S | Transposase |
| AYR48_RS21395 (4077385) | 4077385..4077756 | + | 372 | WP_012777340.1 | hypothetical protein | - |
| AYR48_RS20675 (4078187) | 4078187..4079323 | + | 1137 | WP_000420821.1 | ISAs1 family transposase ISEc1 | Transposase |
| AYR48_RS20680 (4079364) | 4079364..4080134 | - | 771 | WP_001118052.1 | 2-oxoglutaramate amidase | - |
| AYR48_RS20685 (4080315) | 4080315..4080761 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| AYR48_RS20690 (4080804) | 4080804..4083248 | - | 2445 | WP_000973107.1 | Acyl-coenzyme A dehydrogenase | VF |
| AYR48_RS20695 (4083488) | 4083488..4084066 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| AYR48_RS20700 (4084272) | 4084272..4085039 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| AYR48_RS20705 (4085010) | 4085010..4085750 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| AYR48_RS20710 (4085906) | 4085906..4086184 | - | 279 | WP_000615981.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| AYR48_RS20715 (4086187) | 4086187..4086447 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| AYR48_RS20720 (4086633) | 4086633..4087406 | + | 774 | WP_001353765.1 | Murein DD-endopeptidase MepH | VF |
| AYR48_RS20725 (4087582) | 4087582..4088079 | + | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| AYR48_RS20730 (4088295) | 4088295..4090007 | - | 1713 | Protein_3792 | Flagellar biosynthesis protein FlhA | VF |
| AYR48_RS20735 (4089979) | 4089979..4090764 | + | 786 | WP_000207564.1 | Chemotaxis protein LafU | VF |
| AYR48_RS20740 (4090835) | 4090835..4091890 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| AYR48_RS20745 (4091942) | 4091942..4092235 | + | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| AYR48_RS20750 (4092238) | 4092238..4092636 | + | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| AYR48_RS20755 (4092646) | 4092646..4093098 | + | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| AYR48_RS20760 (4093344) | 4093344..4093547 | + | 204 | Protein_3798 | RtcB family protein | - |
| AYR48_RS20765 (4093546) | 4093546..4094067 | + | 522 | Protein_3799 | peptide chain release factor H | - |
| AYR48_RS20770 (4094124) | 4094124..4095581 | - | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| AYR48_RS20775 (4095842) | 4095842..4096300 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (4096896) | 4096896..4096976 | + | 81 | NuclAT_12 | - | - |
| - (4096896) | 4096896..4096976 | + | 81 | NuclAT_12 | - | - |
| - (4096896) | 4096896..4096976 | + | 81 | NuclAT_12 | - | - |
| - (4096896) | 4096896..4096976 | + | 81 | NuclAT_12 | - | - |
| AYR48_RS20780 (4096392) | 4096392..4097636 | + | 1245 | WP_000189541.1 | esterase FrsA | - |
| AYR48_RS20785 (4097694) | 4097694..4098095 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| AYR48_RS20795 (4098221) | 4098221..4098925 | + | 705 | Protein_3804 | IS1 family transposase IS1G | Transposase |
| AYR48_RS20800 (4098936) | 4098936..4099973 | - | 1038 | WP_000749880.1 | phosphoporin PhoE | - |
| AYR48_RS20805 (4100261) | 4100261..4101364 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| AYR48_RS20810 (4101376) | 4101376..4102629 | + | 1254 | WP_000893272.1 | glutamate-5-semialdehyde dehydrogenase | - |
| AYR48_RS20820 (4102946) | 4102946..4103284 | - | 339 | Protein_3808 | LysR substrate-binding domain-containing protein | - |
| AYR48_RS20825 (4103335) | 4103335..4104291 | - | 957 | WP_000122394.1 | molybdenum cofactor insertion chaperone PaoD | - |
| AYR48_RS20830 (4104301) | 4104301..4106499 | - | 2199 | WP_000667062.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| AYR48_RS20835 (4106496) | 4106496..4107452 | - | 957 | WP_000643325.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| AYR48_RS20840 (4107449) | 4107449..4108138 | - | 690 | WP_000070679.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| AYR48_RS20850 (4108555) | 4108555..4109169 | + | 615 | WP_001019920.1 | YagU family protein | - |
| AYR48_RS21400 (4109174) | 4109174..4109386 | + | 213 | WP_000998331.1 | hypothetical protein | - |
| AYR48_RS20855 (4109416) | 4109416..4109745 | - | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| AYR48_RS20860 (4110058) | 4110058..4110768 | - | 711 | WP_001301243.1 | putative fimbrial chaperone EcpE | VF |
| AYR48_RS20865 (4110737) | 4110737..4112380 | - | 1644 | WP_001301239.1 | Fimbria adhesin EcpD | VF |
| AYR48_RS20870 (4112370) | 4112370..4114895 | - | 2526 | WP_001131058.1 | putative outer membrane usher protein EcpC | VF |
| AYR48_RS20875 (4114921) | 4114921..4115589 | - | 669 | WP_000716394.1 | putative fimbrial chaperone EcpB | VF |
| AYR48_RS20880 (4115647) | 4115647..4116282 | - | 636 | WP_000150118.1 | Common pilus major fimbrillin subunit EcpA | VF |
| AYR48_RS20885 (4116308) | 4116308..4116850 | - | 543 | WP_001301257.1 | HTH-type transcriptional regulator EcpR | VF |
| AYR48_RS20895 (4117673) | 4117673..4117900 | + | 228 | WP_001147279.1 | protein YkgL | - |
| AYR48_RS20900 (4117935) | 4117935..4118075 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| AYR48_RS20905 (4118075) | 4118075..4118338 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| AYR48_RS20915 (4118702) | 4118702..4118803 | - | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| AYR48_RS20920 (4119277) | 4119277..4119366 | - | 90 | Protein_3826 | hypothetical protein | - |
| AYR48_RS20925 (4119918) | 4119918..4120874 | + | 957 | Protein_3827 | Invasin | VF |
| AYR48_RS20930 (4121290) | 4121290..4122141 | - | 852 | WP_000621009.1 | Right origin-binding protein | VF |
| AYR48_RS21405 (4122444) | 4122444..4122572 | + | 129 | Protein_3829 | aldo/keto reductase | - |
| AYR48_RS20935 (4122732) | 4122732..4123325 | - | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| AYR48_RS20940 (4123337) | 4123337..4123573 | - | 237 | WP_000474077.1 | reactive chlorine resistance periplasmic protein RclB | - |
| AYR48_RS20945 (4123682) | 4123682..4125007 | - | 1326 | WP_001046311.1 | reactive chlorine resistance oxidoreductase RclA | - |
| AYR48_RS20950 (4125233) | 4125233..4126087 | + | 855 | WP_000339594.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| AYR48_RS20955 (4126614) | 4126614..4127333 | + | 720 | WP_001102108.1 | heterodisulfide reductase-related iron-sulfur binding cluster | - |
| AYR48_RS20960 (4127344) | 4127344..4128771 | + | 1428 | WP_000023927.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| AYR48_RS20965 (4128764) | 4128764..4129459 | + | 696 | WP_000370307.1 | LUD domain-containing protein | - |
| AYR48_RS20980 (4129702) | 4129702..4130370 | - | 669 | WP_001209100.1 | protein YkgH | - |
| AYR48_RS20985 (4130583) | 4130583..4132253 | - | 1671 | WP_001159087.1 | choline dehydrogenase | - |
| AYR48_RS20990 (4132267) | 4132267..4133739 | - | 1473 | WP_000089110.1 | betaine-aldehyde dehydrogenase | - |
| AYR48_RS20995 (4133753) | 4133753..4134340 | - | 588 | WP_001335745.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|