MGE detailed information
MGE type: Genomic_island MGE length: 14217 bp
Accession: NZ_CP014642 Location: 1038011..1052227 Organism: Escherichia coli strain BLK16 Replicon: chromosome
Accession: NZ_CP014642 Location: 1038011..1052227 Organism: Escherichia coli strain BLK16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYR48_RS05320 (1034826) | 1034826..1036511 | - | 1686 | WP_000628583.1 | ABC transporter ATP-binding protein/permease | - |
| AYR48_RS21225 (1036714) | 1036714..1036836 | + | 123 | WP_120795387.1 | protein YneP | - |
| AYR48_RS05325 (1036802) | 1036802..1037959 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| AYR48_RS05330 (1038011) | 1038011..1039693 | - | 1683 | WP_001318307.1 | sulfatase | - |
| AYR48_RS05335 (1040095) | 1040095..1040856 | - | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| AYR48_RS05340 (1040931) | 1040931..1041128 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| AYR48_RS05345 (1041376) | 1041376..1043655 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| AYR48_RS05350 (1043989) | 1043989..1044903 | - | 915 | WP_000520676.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| AYR48_RS05355 (1044962) | 1044962..1045465 | - | 504 | WP_000825452.1 | Protein FimG | VF |
| AYR48_RS05360 (1045478) | 1045478..1046008 | - | 531 | WP_000876763.1 | Protein FimF | VF |
| AYR48_RS21480 (1046022) | 1046022..1048672 | - | 2651 | Protein_985 | fimbrial biogenesis outer membrane usher protein | - |
| AYR48_RS05375 (1048714) | 1048714..1049424 | - | 711 | Protein_986 | Chaperone protein FocC | VF |
| AYR48_RS05380 (1049785) | 1049785..1050267 | - | 483 | WP_000931227.1 | Type-1 fimbrial protein, A chain | VF |
| AYR48_RS05390 (1050639) | 1050639..1051961 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| AYR48_RS05395 (1051961) | 1051961..1052227 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| AYR48_RS05400 (1052450) | 1052450..1054030 | - | 1581 | Protein_990 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| AYR48_RS05405 (1054026) | 1054026..1054802 | + | 777 | Protein_991 | histidine kinase | - |
| AYR48_RS05410 (1054814) | 1054814..1055836 | + | 1023 | WP_000172488.1 | autoinducer 2 ABC transporter substrate-binding protein LsrB | - |
| AYR48_RS05415 (1055863) | 1055863..1056738 | + | 876 | WP_000774188.1 | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | - |
| AYR48_RS05420 (1056762) | 1056762..1057052 | + | 291 | WP_000558527.1 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.009 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.009 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.009 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.009 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.009 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.009 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.009 |