MGE detailed information
MGE type: Prophage MGE length: 55579 bp
Accession: NZ_CP014641 Location: 4043151..4098729 Organism: Escherichia coli strain BLK9 Replicon: chromosome
Accession: NZ_CP014641 Location: 4043151..4098729 Organism: Escherichia coli strain BLK9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYL54_RS20440 (4038507) | 4038507..4038992 | + | 486 | WP_000758956.1 | molecular chaperone Skp | - |
| AYL54_RS20445 (4038996) | 4038996..4040021 | + | 1026 | WP_001139294.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | - |
| AYL54_RS20450 (4040126) | 4040126..4040581 | + | 456 | WP_000210739.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| AYL54_RS20455 (4040585) | 4040585..4041373 | + | 789 | WP_000565966.1 | acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase | - |
| AYL54_RS20460 (4041373) | 4041373..4042521 | + | 1149 | WP_000139655.1 | lipid-A-disaccharide synthase | - |
| AYL54_RS20465 (4042518) | 4042518..4043114 | + | 597 | WP_000569405.1 | ribonuclease HII | - |
| AYL54_RS20470 (4043151) | 4043151..4046633 | + | 3483 | WP_001294774.1 | DNA polymerase III subunit alpha | - |
| AYL54_RS20475 (4046646) | 4046646..4047605 | + | 960 | WP_000055746.1 | acetyl-CoA carboxylase carboxyl transferase subunit alpha | - |
| AYL54_RS20480 (4047704) | 4047704..4049845 | + | 2142 | WP_001020950.1 | lysine decarboxylase LdcC | - |
| AYL54_RS20485 (4049902) | 4049902..4050291 | + | 390 | WP_000901106.1 | VOC family protein | - |
| AYL54_RS20490 (4050356) | 4050356..4051654 | + | 1299 | WP_000176582.1 | tRNA lysidine(34) synthetase TilS | - |
| AYL54_RS20495 (4051703) | 4051703..4051963 | - | 261 | WP_000062312.1 | Rho-binding antiterminator | - |
| AYL54_RS20500 (4051950) | 4051950..4052150 | - | 201 | WP_000417058.1 | YaeP family protein | - |
| AYL54_RS20505 (4052316) | 4052316..4052861 | + | 546 | WP_001185290.1 | YaeQ family protein | - |
| AYL54_RS20510 (4052858) | 4052858..4053280 | + | 423 | WP_000635543.1 | alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB | - |
| AYL54_RS20515 (4053294) | 4053294..4054004 | + | 711 | WP_000239183.1 | envelope stress response activation lipoprotein NlpE | - |
| AYL54_RS20520 (4054204) | 4054204..4055028 | - | 825 | WP_001301405.1 | YaeF family permuted papain-like enzyme | - |
| AYL54_RS20525 (4055081) | 4055081..4056799 | - | 1719 | WP_001260712.1 | proline--tRNA ligase | - |
| AYL54_RS20530 (4056910) | 4056910..4057617 | - | 708 | WP_000094031.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| AYL54_RS20535 (4057614) | 4057614..4058018 | - | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| AYL54_RS20540 (4058136) | 4058136..4058951 | - | 816 | WP_000874224.1 | hypothetical protein | VF |
| AYL54_RS20545 (4058991) | 4058991..4059644 | - | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| AYL54_RS20550 (4059637) | 4059637..4060668 | - | 1032 | WP_000593994.1 | hypothetical protein | VF |
| AYL54_RS20555 (4060856) | 4060856..4061428 | + | 573 | WP_001140174.1 | hypothetical protein | VF |
| AYL54_RS20590 (4067276) | 4067276..4068079 | + | 804 | WP_000997050.1 | 2,5-didehydrogluconate reductase DkgB | - |
| AYL54_RS20595 (4068076) | 4068076..4068990 | - | 915 | WP_000648577.1 | hypothetical protein | VF |
| AYL54_RS20600 (4069231) | 4069231..4070031 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| AYL54_RS20605 (4070035) | 4070035..4070658 | + | 624 | WP_000016015.1 | class I SAM-dependent methyltransferase | - |
| AYL54_RS20610 (4070706) | 4070706..4072064 | - | 1359 | WP_000644685.1 | hypothetical protein | VF |
| AYL54_RS20615 (4072136) | 4072136..4072891 | - | 756 | WP_001052717.1 | hydroxyacylglutathione hydrolase | - |
| AYL54_RS20620 (4072925) | 4072925..4073647 | + | 723 | WP_001297210.1 | class I SAM-dependent methyltransferase | - |
| AYL54_RS20625 (4073644) | 4073644..4074111 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| AYL54_RS20630 (4074176) | 4074176..4074907 | + | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| AYL54_RS20640 (4075446) | 4075446..4076231 | + | 786 | WP_001053631.1 | hypothetical protein | - |
| AYL54_RS21630 (4076368) | 4076368..4076439 | - | 72 | Protein_3792 | hypothetical protein | - |
| AYL54_RS20650 (4076497) | 4076497..4077194 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| AYL54_RS21385 (4077196) | 4077196..4077567 | + | 372 | WP_012777340.1 | hypothetical protein | - |
| AYL54_RS20660 (4077998) | 4077998..4079134 | + | 1137 | WP_000420821.1 | ISAs1 family transposase ISEc1 | Transposase |
| AYL54_RS20665 (4079175) | 4079175..4079945 | - | 771 | WP_001118052.1 | 2-oxoglutaramate amidase | - |
| AYL54_RS20670 (4080126) | 4080126..4080572 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| AYL54_RS20675 (4080615) | 4080615..4083059 | - | 2445 | WP_000973107.1 | hypothetical protein | VF |
| AYL54_RS20680 (4083299) | 4083299..4083877 | + | 579 | WP_000284050.1 | hypothetical protein | VF |
| AYL54_RS20685 (4084083) | 4084083..4084850 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| AYL54_RS20690 (4084821) | 4084821..4085561 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| AYL54_RS20695 (4085717) | 4085717..4085995 | - | 279 | WP_000615981.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| AYL54_RS20700 (4085998) | 4085998..4086258 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| AYL54_RS20705 (4086444) | 4086444..4087217 | + | 774 | WP_001353765.1 | hypothetical protein | VF |
| AYL54_RS20710 (4087393) | 4087393..4087890 | + | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| AYL54_RS20715 (4088106) | 4088106..4089818 | - | 1713 | Protein_3806 | hypothetical protein | VF |
| AYL54_RS20720 (4089790) | 4089790..4090575 | + | 786 | WP_000207564.1 | hypothetical protein | VF |
| AYL54_RS20725 (4090646) | 4090646..4091701 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| AYL54_RS20730 (4091753) | 4091753..4092046 | + | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| AYL54_RS20735 (4092049) | 4092049..4092447 | + | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| AYL54_RS20740 (4092457) | 4092457..4092909 | + | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| AYL54_RS20745 (4093155) | 4093155..4093358 | + | 204 | Protein_3812 | RtcB family protein | - |
| AYL54_RS20750 (4093357) | 4093357..4093878 | + | 522 | Protein_3813 | peptide chain release factor H | - |
| AYL54_RS20755 (4093935) | 4093935..4095392 | - | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| AYL54_RS20760 (4095653) | 4095653..4096111 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (4096707) | 4096707..4096787 | + | 81 | NuclAT_12 | - | - |
| - (4096707) | 4096707..4096787 | + | 81 | NuclAT_12 | - | - |
| - (4096707) | 4096707..4096787 | + | 81 | NuclAT_12 | - | - |
| - (4096707) | 4096707..4096787 | + | 81 | NuclAT_12 | - | - |
| AYL54_RS20765 (4096203) | 4096203..4097447 | + | 1245 | WP_000189541.1 | esterase FrsA | - |
| AYL54_RS20770 (4097505) | 4097505..4097906 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| AYL54_RS20780 (4098032) | 4098032..4098729 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| AYL54_RS20785 (4098740) | 4098740..4099777 | - | 1038 | WP_000749880.1 | phosphoporin PhoE | - |
| AYL54_RS20790 (4100065) | 4100065..4101168 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| AYL54_RS20795 (4101180) | 4101180..4102433 | + | 1254 | WP_000893272.1 | glutamate-5-semialdehyde dehydrogenase | - |
| AYL54_RS20805 (4102750) | 4102750..4103088 | - | 339 | Protein_3822 | LysR substrate-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|