MGE detailed information
MGE type: Conjugative plasmid MGE length: 114223 bp
Accession: NZ_CP014523 Location: 1..114223 Organism: Escherichia coli strain ZH063 Replicon: plasmid pZH063_1
Accession: NZ_CP014523 Location: 1..114223 Organism: Escherichia coli strain ZH063 Replicon: plasmid pZH063_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVR76_RS25090 () | 303..563 | - | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| AVR76_RS25095 () | 803..1393 | - | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| AVR76_RS25100 () | 1431..1640 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| AVR76_RS25105 () | 1686..2147 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| AVR76_RS25110 () | 2392..2604 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| AVR76_RS25115 () | 2733..3293 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| AVR76_RS25120 () | 3396..4256 | - | 861 | WP_000704523.1 | alpha/beta hydrolase | - |
| AVR76_RS25125 () | 4315..5061 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| AVR76_RS25130 () | 5081..10350 | - | 5270 | Protein_10 | conjugative transfer relaxase/helicase TraI | - |
| AVR76_RS25135 () | 10350..12494 | - | 2145 | WP_000009347.1 | type IV conjugative transfer system coupling protein TraD | - |
| AVR76_RS25140 () | 12545..13282 | - | 738 | WP_000199901.1 | hypothetical protein | - |
| AVR76_RS25145 () | 13485..14216 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| AVR76_RS25150 () | 14265..14750 | - | 486 | WP_000605869.1 | hypothetical protein | - |
| AVR76_RS25155 () | 14766..17587 | - | 2822 | Protein_15 | conjugal transfer mating pair stabilization protein TraG | - |
| AVR76_RS25160 () | 17584..18957 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| AVR76_RS25165 () | 18944..19369 | - | 426 | WP_001323332.1 | F-type conjugal transfer protein TrbF | - |
| AVR76_RS25170 () | 19317..19664 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| AVR76_RS25175 () | 19594..20139 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AVR76_RS25180 () | 20126..20410 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AVR76_RS25185 () | 20491..20826 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| AVR76_RS27825 () | 20807..21148 | - | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| AVR76_RS25190 () | 21162..21905 | - | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AVR76_RS25195 () | 21898..22155 | - | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| AVR76_RS25200 () | 22182..24031 | - | 1850 | Protein_25 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AVR76_RS25205 () | 24028..24666 | - | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AVR76_RS25210 () | 24675..24980 | - | 306 | WP_000224418.1 | hypothetical protein | - |
| AVR76_RS25215 () | 25010..26002 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| AVR76_RS25220 () | 25999..26631 | - | 633 | WP_001203736.1 | type-F conjugative transfer system protein TraW | - |
| AVR76_RS25225 () | 26628..27014 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| AVR76_RS25230 () | 27011..29641 | - | 2631 | WP_000069778.1 | type IV secretion system protein TraC | - |
| AVR76_RS25240 () | 30306..30779 | - | 474 | WP_000549566.1 | hypothetical protein | - |
| AVR76_RS27830 () | 30772..30993 | - | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| AVR76_RS25245 () | 31128..31643 | - | 516 | WP_000809889.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AVR76_RS25250 () | 31640..31873 | - | 234 | WP_000235790.1 | conjugal transfer protein TrbG | - |
| AVR76_RS25255 () | 31885..32238 | - | 354 | WP_071586423.1 | conjugal transfer protein TrbD | - |
| AVR76_RS25260 () | 32192..32782 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| AVR76_RS25265 () | 32772..34199 | - | 1428 | WP_000146665.1 | conjugal transfer protein TraB | - |
| AVR76_RS25270 () | 34199..34903 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| AVR76_RS25275 () | 34914..35480 | - | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| AVR76_RS25280 () | 35502..35813 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| AVR76_RS25285 () | 35828..36187 | - | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| AVR76_RS25290 () | 36221..36448 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| AVR76_RS25295 () | 36542..37228 | - | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| AVR76_RS25300 () | 37422..37805 | - | 384 | WP_001151562.1 | relaxosome protein TraM | - |
| AVR76_RS25305 () | 38136..38738 | + | 603 | WP_001323326.1 | transglycosylase SLT domain-containing protein | - |
| AVR76_RS25310 () | 39033..39854 | - | 822 | WP_001234489.1 | DUF945 domain-containing protein | - |
| AVR76_RS25315 () | 39973..40260 | - | 288 | WP_000107526.1 | hypothetical protein | - |
| AVR76_RS25335 () | 41176..41334 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 41399..41598 | - | 200 | NuclAT_0 | - | - |
| - () | 41399..41598 | - | 200 | NuclAT_0 | - | - |
| - () | 41399..41598 | - | 200 | NuclAT_0 | - | - |
| - () | 41399..41598 | - | 200 | NuclAT_0 | - | - |
| AVR76_RS25345 () | 41610..42329 | - | 720 | WP_001276230.1 | plasmid SOS inhibition protein A | - |
| AVR76_RS25350 () | 42326..42760 | - | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| AVR76_RS25355 () | 42815..44773 | - | 1959 | WP_001145501.1 | ParB/RepB/Spo0J family partition protein | - |
| AVR76_RS25360 () | 44832..45065 | - | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| AVR76_RS25365 () | 45122..45649 | - | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| AVR76_RS28540 () | 45951..46409 | + | 459 | WP_011478091.1 | hypothetical protein | - |
| AVR76_RS25375 () | 46495..47058 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| AVR76_RS25380 () | 47104..48465 | - | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| AVR76_RS25385 () | 48517..48747 | - | 231 | WP_000155844.1 | hypothetical protein | - |
| AVR76_RS29335 () | 49260..49740 | + | 481 | Protein_59 | hypothetical protein | - |
| AVR76_RS29340 () | 49710..49901 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| AVR76_RS25400 () | 49898..50320 | - | 423 | WP_000271708.1 | DUF1380 family protein | - |
| AVR76_RS25405 () | 50367..50669 | - | 303 | WP_001666994.1 | antirestriction protein | - |
| AVR76_RS25410 () | 51208..51978 | - | 771 | WP_001004562.1 | hypothetical protein | - |
| AVR76_RS25415 () | 52023..52457 | - | 435 | WP_000274508.1 | DUF1380 family protein | - |
| AVR76_RS25420 () | 52471..52692 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| AVR76_RS25425 () | 52693..53376 | - | 684 | WP_000086169.1 | DNA methylase | - |
| AVR76_RS28565 () | 53452..53763 | - | 312 | WP_001310011.1 | hypothetical protein | - |
| AVR76_RS25435 () | 53760..53963 | - | 204 | WP_001298677.1 | hypothetical protein | - |
| AVR76_RS25440 () | 54004..55176 | + | 1173 | WP_000952372.1 | IS21-like element IS21 family transposase | - |
| AVR76_RS25445 () | 55176..55973 | + | 798 | WP_000544830.1 | IS21-like element IS21 family helper ATPase IstB | - |
| AVR76_RS25450 () | 55967..56797 | - | 831 | WP_001298676.1 | DUF1281 domain-containing protein | - |
| AVR76_RS25455 () | 57216..58436 | - | 1221 | WP_000343766.1 | ISL3-like element ISEc53 family transposase | - |
| AVR76_RS25460 () | 58455..58973 | - | 519 | WP_000115885.1 | ClbS/DfsB family four-helix bundle protein | - |
| AVR76_RS25465 () | 59108..59356 | + | 249 | WP_000619112.1 | DinI-like family protein | - |
| AVR76_RS25470 () | 59353..59790 | + | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AVR76_RS25475 () | 59790..61060 | + | 1271 | Protein_76 | translesion error-prone DNA polymerase V subunit UmuC | - |
| AVR76_RS25480 () | 61065..61457 | - | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| AVR76_RS25485 () | 61462..62433 | - | 972 | WP_001103694.1 | hypothetical protein | - |
| AVR76_RS25490 () | 62662..63306 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| AVR76_RS25495 () | 63300..63575 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| AVR76_RS25500 () | 63713..64522 | - | 810 | WP_000016979.1 | site-specific integrase | - |
| AVR76_RS25505 () | 64523..64828 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AVR76_RS25510 () | 64830..65048 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AVR76_RS25515 () | 67370..68011 | + | 642 | WP_000990667.1 | hypothetical protein | - |
| AVR76_RS25530 () | 69186..70163 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| AVR76_RS25535 () | 70406..71146 | - | 741 | WP_001066947.1 | tyrosine-type recombinase/integrase | - |
| AVR76_RS25540 () | 71267..71455 | - | 189 | WP_001332784.1 | hypothetical protein | - |
| AVR76_RS25545 () | 71822..72991 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| AVR76_RS29165 () | 73217..73392 | - | 176 | Protein_89 | IS3 family transposase | - |
| AVR76_RS27900 () | 73838..74110 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| AVR76_RS25555 () | 74635..75071 | - | 437 | Protein_91 | transposase | - |
| AVR76_RS25560 () | 75353..77323 | + | 1971 | WP_001298664.1 | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor | - |
| AVR76_RS25565 () | 77330..78121 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| AVR76_RS25570 () | 78184..78792 | - | 609 | Protein_94 | IS66 family transposase | - |
| AVR76_RS25575 () | 78860..79642 | - | 783 | WP_001300609.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| AVR76_RS25580 () | 79639..80661 | - | 1023 | WP_001310017.1 | IS21-like element IS100 family transposase | - |
| AVR76_RS25585 () | 80747..81692 | - | 946 | Protein_97 | IS66 family transposase | - |
| AVR76_RS25595 () | 81741..82088 | - | 348 | WP_000612626.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| AVR76_RS25600 () | 82085..82489 | - | 405 | WP_000839179.1 | IS66 family insertion sequence hypothetical protein | - |
| AVR76_RS25605 () | 82518..82901 | - | 384 | Protein_100 | DDE-type integrase/transposase/recombinase | - |
| AVR76_RS25610 () | 82991..84499 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| AVR76_RS27920 () | 85172..85522 | - | 351 | Protein_102 | IS3 family transposase | - |
| AVR76_RS25620 () | 85608..87107 | + | 1500 | WP_000143800.1 | IS21-like element ISEc10 family transposase | - |
| AVR76_RS25625 () | 87104..87859 | + | 756 | WP_000065240.1 | IS21-like element ISEc10 family helper ATPase IstB | - |
| AVR76_RS28570 () | 87750..88327 | - | 578 | Protein_105 | transposase | - |
| AVR76_RS29170 () | 88353..88658 | + | 306 | Protein_106 | IS91 family transposase | - |
| AVR76_RS25640 () | 89181..90356 | - | 1176 | WP_001020413.1 | enterotoxin production-related protein TieB | - |
| AVR76_RS25645 () | 90425..92686 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| AVR76_RS25650 () | 92855..93631 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| AVR76_RS25655 () | 93639..94514 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| AVR76_RS25660 () | 94846..95532 | - | 687 | Protein_111 | replication initiation protein | - |
| AVR76_RS25670 () | 96984..97319 | - | 336 | WP_001080732.1 | colicin transporter | - |
| AVR76_RS25675 () | 97448..97795 | + | 348 | WP_000142452.1 | hypothetical protein | - |
| AVR76_RS25680 () | 97815..98324 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| AVR76_RS25685 () | 98321..98581 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| AVR76_RS29180 () | 98683..99422 | + | 740 | Protein_116 | IS3 family transposase | - |
| AVR76_RS29345 () | 100094..100408 | + | 315 | Protein_117 | hypothetical protein | - |
| AVR76_RS29350 () | 100409..100582 | + | 174 | Protein_118 | transposase | - |
| AVR76_RS28590 () | 100732..101365 | - | 634 | Protein_119 | histidine-type phosphatase | - |
| AVR76_RS25720 () | 101487..101972 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| AVR76_RS25725 () | 101997..102482 | - | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| AVR76_RS25730 () | 102469..103164 | - | 696 | WP_000117262.1 | ABC transporter ATP-binding protein | - |
| AVR76_RS25735 () | 103169..104299 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| AVR76_RS25740 () | 104289..105572 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| AVR76_RS25745 () | 105575..106954 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| AVR76_RS25750 () | 107058..107585 | - | 528 | WP_000178050.1 | iron transporter | - |
| AVR76_RS25755 () | 107640..109511 | - | 1872 | WP_149017036.1 | FTR1 family iron permease | - |
| AVR76_RS25760 () | 109858..110673 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| AVR76_RS25765 () | 110856..111362 | - | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| AVR76_RS25770 () | 111352..111579 | - | 228 | WP_077459403.1 | DsbA family protein | - |
| AVR76_RS25775 () | 111609..112313 | - | 705 | WP_001067837.1 | IS6-like element IS26 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|