MGE detailed information
MGE type: Prophage MGE length: 87864 bp
Accession: NZ_CP014381 Location: 877758..965621 Organism: Staphylococcus aureus strain USA300-SUR6 Replicon: chromosome
Accession: NZ_CP014381 Location: 877758..965621 Organism: Staphylococcus aureus strain USA300-SUR6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYM19_RS04420 () | 872859..875660 | + | 2802 | WP_001056223.1 | MSCRAMM family adhesin clumping factor ClfA | - |
| AYM19_RS04425 () | 875881..877407 | + | 1527 | WP_000791729.1 | von Willebrand factor binding protein Vwb | - |
| AYM19_RS04430 () | 877758..878780 | + | 1023 | WP_000728056.1 | extracellular matrix protein-binding adhesin Emp | - |
| AYM19_RS04435 () | 879115..879585 | + | 471 | WP_000824472.1 | hypothetical protein | VF |
| AYM19_RS04440 () | 879926..880612 | + | 687 | WP_001548082.1 | thermonuclease family protein | - |
| AYM19_RS04445 () | 880969..881169 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| AYM19_RS04450 () | 881665..881883 | - | 219 | WP_000005886.1 | hypothetical protein | - |
| AYM19_RS04455 () | 881945..882229 | - | 285 | WP_001004395.1 | hypothetical protein | - |
| AYM19_RS04460 () | 882317..882886 | - | 570 | WP_001106654.1 | hypothetical protein | - |
| AYM19_RS04465 () | 883074..883262 | - | 189 | WP_000052078.1 | hypothetical protein | Toxin Detail |
| AYM19_RS04470 () | 883291..883551 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| AYM19_RS04475 () | 883892..884095 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| AYM19_RS04480 () | 884092..884328 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| AYM19_RS04485 () | 884553..885134 | + | 582 | WP_001140686.1 | phosphoglycerate mutase family protein | - |
| AYM19_RS04490 () | 885207..885824 | - | 618 | WP_000255561.1 | LysE/ArgO family amino acid transporter | - |
| AYM19_RS04495 () | 885979..886473 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| AYM19_RS04500 () | 886872..887294 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| AYM19_RS04505 () | 887442..888158 | + | 717 | WP_000150017.1 | type I 3-dehydroquinate dehydratase | - |
| AYM19_RS04510 () | 888241..888780 | + | 540 | WP_000422909.1 | nitroreductase | - |
| AYM19_RS04515 () | 888930..889250 | - | 321 | WP_001190695.1 | thioredoxin family protein | - |
| AYM19_RS04520 () | 889394..889750 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| AYM19_RS04525 () | 889908..890288 | + | 381 | WP_000290485.1 | glycine cleavage system protein GcvH | - |
| AYM19_RS04535 () | 890467..891345 | + | 879 | WP_000932219.1 | DUF1963 domain-containing protein | - |
| AYM19_RS04545 () | 892087..892473 | + | 387 | WP_001018962.1 | toprim domain-containing protein | - |
| AYM19_RS04550 () | 892466..892762 | + | 297 | WP_001065801.1 | thioredoxin family protein | - |
| AYM19_RS04555 () | 893012..894037 | + | 1026 | WP_000571218.1 | Methionine import ATP-binding protein MetN 2 | VF |
| AYM19_RS04560 () | 894030..894725 | + | 696 | WP_000520233.1 | ABC transporter permease | - |
| AYM19_RS04565 () | 894743..895564 | + | 822 | WP_000732326.1 | Methionine-binding lipoprotein MetQ | VF |
| AYM19_RS04570 () | 895707..896927 | - | 1221 | WP_000266158.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| AYM19_RS04575 () | 897015..897743 | - | 729 | WP_000734020.1 | Enterotoxin type A | VF |
| AYM19_RS04580 () | 897767..898495 | - | 729 | WP_001033321.1 | Enterotoxin type A | VF |
| AYM19_RS04585 () | 898512..898970 | - | 459 | WP_000281658.1 | ImmA/IrrE family metallo-endopeptidase | - |
| AYM19_RS04590 () | 898982..899314 | - | 333 | WP_001260004.1 | helix-turn-helix transcriptional regulator | - |
| AYM19_RS04595 () | 899507..899770 | + | 264 | WP_000243849.1 | helix-turn-helix domain-containing protein | - |
| AYM19_RS04600 () | 899763..900035 | + | 273 | WP_000091732.1 | helix-turn-helix domain-containing protein | - |
| AYM19_RS04605 () | 900047..900220 | + | 174 | WP_000784892.1 | hypothetical protein | - |
| AYM19_RS04610 () | 900187..900390 | + | 204 | WP_001231376.1 | hypothetical protein | - |
| AYM19_RS04615 () | 900392..900775 | + | 384 | WP_000403840.1 | hypothetical protein | - |
| AYM19_RS04620 () | 900776..901024 | + | 249 | WP_001103959.1 | DUF1474 family protein | - |
| AYM19_RS04625 () | 901116..903488 | + | 2373 | WP_000985235.1 | primase | - |
| AYM19_RS04630 () | 904159..904503 | + | 345 | WP_001081424.1 | hypothetical protein | - |
| AYM19_RS04635 () | 904728..904934 | + | 207 | WP_000884055.1 | hypothetical protein | - |
| AYM19_RS04640 () | 904921..905979 | + | 1059 | WP_000657538.1 | phage capsid protein | - |
| AYM19_RS04645 () | 906163..906654 | + | 492 | WP_000253084.1 | hypothetical protein | - |
| AYM19_RS04650 () | 906654..906806 | + | 153 | Protein_862 | terminase small subunit | - |
| AYM19_RS04660 () | 907083..908051 | + | 969 | WP_000801979.1 | Abi family protein | - |
| AYM19_RS04665 () | 908286..908840 | - | 555 | WP_001035618.1 | DUF4888 domain-containing protein | - |
| AYM19_RS04675 () | 909874..910068 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| AYM19_RS04680 () | 910301..911152 | - | 852 | WP_001183858.1 | DUF368 domain-containing protein | - |
| AYM19_RS04685 () | 911480..912241 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
| AYM19_RS04690 () | 912339..913646 | + | 1308 | WP_077467053.1 | Fe-S cluster assembly protein SufD | - |
| AYM19_RS04695 () | 913752..915002 | + | 1251 | WP_001006454.1 | cysteine desulfurase | - |
| AYM19_RS04700 () | 914992..915456 | + | 465 | WP_001010508.1 | SUF system NifU family Fe-S cluster assembly protein | - |
| AYM19_RS04705 () | 915607..917004 | + | 1398 | WP_001074405.1 | Fe-S cluster assembly protein SufB | - |
| AYM19_RS04710 () | 917072..918121 | - | 1050 | WP_050961182.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| AYM19_RS04715 () | 918183..918698 | - | 516 | WP_050961183.1 | hypothetical protein | - |
| AYM19_RS04720 () | 918702..919202 | - | 501 | WP_000896616.1 | hypothetical protein | - |
| AYM19_RS04725 () | 919250..919924 | - | 675 | WP_050961185.1 | XRE family transcriptional regulator | - |
| AYM19_RS04730 () | 920116..920355 | + | 240 | WP_001014907.1 | helix-turn-helix transcriptional regulator | - |
| AYM19_RS04735 () | 920371..920574 | + | 204 | WP_050961186.1 | hypothetical protein | - |
| AYM19_RS04740 () | 920762..921553 | + | 792 | WP_050961187.1 | phage antirepressor KilAC domain-containing protein | - |
| AYM19_RS04745 () | 921554..921778 | + | 225 | WP_000187184.1 | hypothetical protein | - |
| AYM19_RS04750 () | 921818..922267 | + | 450 | WP_025920885.1 | hypothetical protein | - |
| AYM19_RS04755 () | 922281..922502 | + | 222 | WP_000977378.1 | hypothetical protein | - |
| AYM19_RS04760 () | 922495..922662 | + | 168 | WP_000066013.1 | DUF1270 domain-containing protein | - |
| AYM19_RS04765 () | 922663..922983 | + | 321 | WP_033843163.1 | hypothetical protein | - |
| AYM19_RS04770 () | 923077..923337 | + | 261 | WP_000291075.1 | hypothetical protein ; Integrase | Integrase |
| AYM19_RS04775 () | 923345..923581 | + | 237 | WP_000802315.1 | hypothetical protein | - |
| AYM19_RS04780 () | 923574..924053 | + | 480 | WP_000002513.1 | siphovirus Gp157 family protein | - |
| AYM19_RS04785 () | 924053..924826 | + | 774 | WP_001288247.1 | AAA family ATPase | - |
| AYM19_RS04790 () | 924857..925411 | + | 555 | WP_050961188.1 | single-stranded DNA-binding protein | - |
| AYM19_RS04795 () | 925424..926089 | + | 666 | WP_050961189.1 | hypothetical protein | - |
| AYM19_RS04800 () | 926089..926871 | + | 783 | WP_050961190.1 | AP2 domain-containing protein | - |
| AYM19_RS04805 () | 926843..927658 | + | 816 | WP_050961191.1 | phage replisome organizer N-terminal domain-containing protein | - |
| AYM19_RS04810 () | 927668..928447 | + | 780 | WP_050961192.1 | ATP-binding protein | - |
| AYM19_RS15740 () | 928441..928602 | + | 162 | WP_000237153.1 | hypothetical protein | - |
| AYM19_RS04815 () | 928615..928836 | + | 222 | Protein_894 | DUF3269 family protein | - |
| AYM19_RS04825 () | 928846..929253 | + | 408 | WP_031898212.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AYM19_RS04830 () | 929253..929438 | + | 186 | WP_031898213.1 | DUF3113 family protein | - |
| AYM19_RS04835 () | 929439..930056 | + | 618 | WP_050961193.1 | hypothetical protein | - |
| AYM19_RS04840 () | 930057..930305 | + | 249 | WP_050961194.1 | phi PVL orf 51-like protein | - |
| AYM19_RS04845 () | 930319..930705 | + | 387 | WP_000693615.1 | hypothetical protein | - |
| AYM19_RS04855 () | 930893..931318 | + | 426 | WP_050961195.1 | hypothetical protein | - |
| AYM19_RS04860 () | 931332..931841 | + | 510 | WP_050961196.1 | hypothetical protein | - |
| AYM19_RS04865 () | 931907..932168 | + | 262 | Protein_902 | hypothetical protein | - |
| AYM19_RS04870 () | 932161..932409 | + | 249 | WP_001065056.1 | DUF1024 family protein | - |
| AYM19_RS04875 () | 932402..932932 | + | 531 | WP_000185662.1 | dUTPase | - |
| AYM19_RS04880 () | 932969..933175 | + | 207 | WP_031764620.1 | DUF1381 domain-containing protein | - |
| AYM19_RS04885 () | 933172..933345 | + | 174 | WP_031924097.1 | transcriptional activator RinB | - |
| AYM19_RS04890 () | 933346..933492 | + | 147 | WP_000990005.1 | hypothetical protein | - |
| AYM19_RS04895 () | 933507..933926 | + | 420 | WP_000058632.1 | transcriptional regulator | - |
| AYM19_RS04900 () | 934113..934553 | + | 441 | WP_001003271.1 | terminase small subunit | - |
| AYM19_RS04905 () | 934540..935817 | + | 1278 | WP_000169945.1 | PBSX family phage terminase large subunit | - |
| AYM19_RS04910 () | 935828..937363 | + | 1536 | WP_000921887.1 | phage portal protein | - |
| AYM19_RS04915 () | 937370..938365 | + | 996 | WP_001813737.1 | minor capsid protein | - |
| AYM19_RS15745 () | 938438..938587 | + | 150 | WP_031898218.1 | hypothetical protein | - |
| AYM19_RS04920 () | 938696..939316 | + | 621 | WP_031925652.1 | DUF4355 domain-containing protein | - |
| AYM19_RS04925 () | 939330..940304 | + | 975 | WP_119879929.1 | phage major capsid protein | - |
| AYM19_RS04930 () | 940326..940613 | + | 288 | WP_001114085.1 | hypothetical protein | - |
| AYM19_RS04935 () | 940622..940954 | + | 333 | WP_000208959.1 | phage head-tail connector protein | - |
| AYM19_RS04940 () | 940951..941253 | + | 303 | WP_031880723.1 | hypothetical protein | - |
| AYM19_RS04945 () | 941253..941600 | + | 348 | WP_001017815.1 | HK97 gp10 family phage protein | - |
| AYM19_RS04950 () | 941612..941995 | + | 384 | WP_000188640.1 | hypothetical protein | - |
| AYM19_RS04955 () | 942014..942595 | + | 582 | WP_031898198.1 | phage major tail protein, TP901-1 family | - |
| AYM19_RS04960 () | 942657..943022 | + | 366 | WP_031898197.1 | tail assembly chaperone | - |
| AYM19_RS04965 () | 943052..943396 | + | 345 | WP_001599101.1 | hypothetical protein | - |
| AYM19_RS04970 () | 943413..946880 | + | 3468 | WP_050961197.1 | hypothetical protein | - |
| AYM19_RS04975 () | 946893..947840 | + | 948 | WP_031898192.1 | phage tail family protein | - |
| AYM19_RS04980 () | 947849..949750 | + | 1902 | WP_000156414.1 | phage tail protein | - |
| AYM19_RS04985 () | 949765..951675 | + | 1911 | WP_050961198.1 | hypothetical protein | - |
| AYM19_RS04990 () | 951675..953498 | + | 1824 | WP_050961199.1 | phage baseplate upper protein | - |
| AYM19_RS04995 () | 953498..953875 | + | 378 | WP_031844790.1 | DUF2977 domain-containing protein | - |
| AYM19_RS05000 () | 953879..954052 | + | 174 | WP_000782200.1 | XkdX family protein | - |
| AYM19_RS05005 () | 954092..954391 | + | 300 | WP_000466777.1 | DUF2951 domain-containing protein | - |
| AYM19_RS05010 () | 954528..956426 | + | 1899 | WP_050961200.1 | Bifunctional autolysin | VF |
| AYM19_RS05015 () | 956439..957677 | + | 1239 | WP_031890881.1 | BppU family phage baseplate upper protein | - |
| AYM19_RS05020 () | 957683..958078 | + | 396 | WP_031890882.1 | hypothetical protein | - |
| AYM19_RS05025 () | 958134..958571 | + | 438 | WP_000354119.1 | phage holin | - |
| AYM19_RS05030 () | 958552..959997 | + | 1446 | WP_050961201.1 | SH3 domain-containing protein | - |
| AYM19_RS05035 () | 960133..960324 | + | 192 | WP_050961202.1 | hypothetical protein | - |
| AYM19_RS05045 () | 960777..960914 | + | 138 | WP_001790198.1 | chorismate mutase | - |
| AYM19_RS05050 () | 960920..961234 | - | 315 | WP_000274029.1 | hypothetical protein | - |
| AYM19_RS05055 () | 961599..962639 | + | 1041 | WP_000582332.1 | HlyC/CorC family transporter | - |
| AYM19_RS05060 () | 962653..963720 | + | 1068 | WP_000267247.1 | nitronate monooxygenase family protein | - |
| AYM19_RS05065 () | 963787..963885 | + | 99 | WP_001791752.1 | hypothetical protein | - |
| AYM19_RS05070 () | 963933..964781 | + | 849 | WP_000608129.1 | DUF72 domain-containing protein | - |
| AYM19_RS05075 () | 964794..965621 | + | 828 | WP_000927632.1 | sulfite exporter TauE/SafE family protein | - |
| AYM19_RS05080 () | 965648..966967 | + | 1320 | WP_001241217.1 | bifunctional metallophosphatase/5'-nucleotidase | - |
| AYM19_RS05085 () | 967051..967968 | + | 918 | WP_000201875.1 | lipoyl synthase | - |
| AYM19_RS05090 () | 968098..968481 | + | 384 | WP_000598444.1 | YutD family protein | - |
| AYM19_RS05095 () | 968560..968826 | - | 267 | WP_000566649.1 | DUF3055 domain-containing protein | - |
| AYM19_RS05100 () | 968924..969358 | + | 435 | WP_000273981.1 | DUF86 domain-containing protein | - |
| AYM19_RS05105 () | 969358..970137 | + | 780 | WP_000816184.1 | TIGR01457 family HAD-type hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|