MGE detailed information
MGE type: Prophage MGE length: 31083 bp
Accession: NZ_CP014362 Location: 866703..897785 Organism: Staphylococcus aureus strain USA300-SUR1 Replicon: chromosome
Accession: NZ_CP014362 Location: 866703..897785 Organism: Staphylococcus aureus strain USA300-SUR1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYM13_RS04370 () | 861804..864605 | + | 2802 | WP_031868658.1 | MSCRAMM family adhesin clumping factor ClfA | - |
| AYM13_RS04375 () | 864826..866352 | + | 1527 | WP_000791729.1 | von Willebrand factor binding protein Vwb | - |
| AYM13_RS04380 () | 866703..867725 | + | 1023 | WP_000728056.1 | extracellular matrix protein-binding adhesin Emp | - |
| AYM13_RS04385 () | 868060..868530 | + | 471 | WP_000824472.1 | hypothetical protein | VF |
| AYM13_RS04390 () | 868871..869557 | + | 687 | WP_001548082.1 | thermonuclease family protein | - |
| AYM13_RS04395 () | 869914..870114 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| AYM13_RS04400 () | 870610..870828 | - | 219 | WP_000005886.1 | hypothetical protein | - |
| AYM13_RS04405 () | 870890..871174 | - | 285 | WP_001004395.1 | hypothetical protein | - |
| AYM13_RS04410 () | 871262..871831 | - | 570 | WP_001106654.1 | hypothetical protein | - |
| AYM13_RS04415 () | 872019..872207 | - | 189 | WP_000052078.1 | hypothetical protein | Toxin Detail |
| AYM13_RS04420 () | 872236..872496 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| AYM13_RS04425 () | 872837..873040 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| AYM13_RS04430 () | 873037..873273 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| AYM13_RS04435 () | 873498..874079 | + | 582 | WP_001140686.1 | phosphoglycerate mutase family protein | - |
| AYM13_RS04440 () | 874152..874769 | - | 618 | WP_000255561.1 | LysE/ArgO family amino acid transporter | - |
| AYM13_RS04445 () | 874924..875418 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| AYM13_RS04450 () | 875817..876239 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| AYM13_RS04455 () | 876387..877103 | + | 717 | WP_000150017.1 | type I 3-dehydroquinate dehydratase | - |
| AYM13_RS04460 () | 877186..877725 | + | 540 | WP_000422909.1 | nitroreductase | - |
| AYM13_RS04465 () | 877875..878195 | - | 321 | WP_001190695.1 | thioredoxin family protein | - |
| AYM13_RS04470 () | 878339..878695 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| AYM13_RS04475 () | 878853..879233 | + | 381 | WP_000290485.1 | glycine cleavage system protein GcvH | - |
| AYM13_RS04485 () | 879412..880290 | + | 879 | WP_000932219.1 | DUF1963 domain-containing protein | - |
| AYM13_RS04495 () | 881032..881418 | + | 387 | WP_001018962.1 | toprim domain-containing protein | - |
| AYM13_RS04500 () | 881411..881707 | + | 297 | WP_001065801.1 | thioredoxin family protein | - |
| AYM13_RS04505 () | 881957..882982 | + | 1026 | WP_000571218.1 | Methionine import ATP-binding protein MetN 2 | VF |
| AYM13_RS04510 () | 882975..883670 | + | 696 | WP_000520233.1 | ABC transporter permease | - |
| AYM13_RS04515 () | 883688..884509 | + | 822 | WP_000732326.1 | Methionine-binding lipoprotein MetQ | VF |
| AYM13_RS04520 () | 884652..885872 | - | 1221 | WP_000266158.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| AYM13_RS04525 () | 885960..886688 | - | 729 | WP_000734020.1 | Enterotoxin type A | VF |
| AYM13_RS04530 () | 886712..887440 | - | 729 | WP_001033321.1 | Enterotoxin type A | VF |
| AYM13_RS04535 () | 887457..887915 | - | 459 | WP_076035545.1 | ImmA/IrrE family metallo-endopeptidase | - |
| AYM13_RS04540 () | 887927..888259 | - | 333 | WP_001260004.1 | helix-turn-helix transcriptional regulator | - |
| AYM13_RS04545 () | 888452..888715 | + | 264 | WP_000243849.1 | helix-turn-helix domain-containing protein | - |
| AYM13_RS04550 () | 888708..888980 | + | 273 | WP_000091732.1 | helix-turn-helix domain-containing protein | - |
| AYM13_RS04555 () | 888992..889165 | + | 174 | WP_000784892.1 | hypothetical protein | - |
| AYM13_RS04560 () | 889132..889335 | + | 204 | WP_001231376.1 | hypothetical protein | - |
| AYM13_RS04565 () | 889337..889720 | + | 384 | WP_000403840.1 | hypothetical protein | - |
| AYM13_RS04570 () | 889721..889969 | + | 249 | WP_001103959.1 | DUF1474 family protein | - |
| AYM13_RS04575 () | 890061..892433 | + | 2373 | WP_000985235.1 | primase | - |
| AYM13_RS04580 () | 893104..893448 | + | 345 | WP_001081424.1 | hypothetical protein | - |
| AYM13_RS04585 () | 893673..893879 | + | 207 | WP_000884055.1 | hypothetical protein | - |
| AYM13_RS04590 () | 893866..894924 | + | 1059 | WP_000657538.1 | phage capsid protein | - |
| AYM13_RS04595 () | 895108..895599 | + | 492 | WP_000253084.1 | hypothetical protein | - |
| AYM13_RS04600 () | 895599..895751 | + | 153 | Protein_849 | terminase small subunit | - |
| AYM13_RS04610 () | 896028..896996 | + | 969 | WP_000801979.1 | Abi family protein | - |
| AYM13_RS04615 () | 897231..897785 | - | 555 | WP_001035618.1 | DUF4888 domain-containing protein | - |
| AYM13_RS04625 () | 898819..899013 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| AYM13_RS04630 () | 899246..900097 | - | 852 | WP_001183858.1 | DUF368 domain-containing protein | - |
| AYM13_RS04635 () | 900425..901186 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
| AYM13_RS04640 () | 901284..902591 | + | 1308 | WP_000205572.1 | Fe-S cluster assembly protein SufD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|