MGE detailed information
MGE type: Prophage MGE length: 30654 bp
Accession: NZ_CP014269 Location: 990442..1021095 Organism: Escherichia coli B strain C3029 Replicon: chromosome
Accession: NZ_CP014269 Location: 990442..1021095 Organism: Escherichia coli B strain C3029 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3029_RS04810 () | 989642..990445 | + | 804 | WP_000997050.1 | 2,5-didehydrogluconate reductase DkgB | - |
| C3029_RS04815 () | 990442..991356 | - | 915 | WP_000648577.1 | HTH-type transcriptional regulator DmlR | VF |
| C3029_RS04820 () | 991597..992397 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| C3029_RS04825 () | 992428..993024 | + | 597 | Protein_894 | methyltransferase domain-containing protein | - |
| C3029_RS04830 () | 993072..994430 | - | 1359 | WP_000644685.1 | Membrane-bound lytic murein transglycosylase D | VF |
| C3029_RS04835 () | 994502..995257 | - | 756 | WP_001052717.1 | hydroxyacylglutathione hydrolase | - |
| C3029_RS04840 () | 995291..996013 | + | 723 | WP_001297210.1 | class I SAM-dependent methyltransferase | - |
| C3029_RS04845 () | 996010..996477 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| C3029_RS04850 () | 996542..997273 | + | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| C3029_RS04860 () | 997812..998597 | + | 786 | WP_001053631.1 | hypothetical protein | - |
| C3029_RS04865 () | 998863..999560 | + | 698 | Protein_901 | IS1 family transposase IS1A | Transposase |
| C3029_RS25340 () | 999562..999933 | + | 372 | WP_012777340.1 | hypothetical protein | - |
| C3029_RS04870 () | 1000364..1001500 | + | 1137 | WP_000420821.1 | ISAs1 family transposase ISEc1 | Transposase |
| C3029_RS04875 () | 1001541..1002311 | - | 771 | WP_001118052.1 | 2-oxoglutaramate amidase | - |
| C3029_RS04880 () | 1002492..1002938 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| C3029_RS04885 () | 1002981..1005425 | - | 2445 | WP_000973107.1 | Acyl-coenzyme A dehydrogenase | VF |
| C3029_RS04890 () | 1005665..1006243 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| C3029_RS04895 () | 1006449..1007216 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| C3029_RS04900 () | 1007187..1007927 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| C3029_RS04905 () | 1008083..1008361 | - | 279 | WP_000615981.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| C3029_RS04910 () | 1008364..1008624 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| C3029_RS04915 () | 1008810..1009583 | + | 774 | WP_001353765.1 | Murein DD-endopeptidase MepH | VF |
| C3029_RS04920 () | 1009759..1010256 | + | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| C3029_RS04925 () | 1010472..1012184 | - | 1713 | Protein_914 | Flagellar biosynthesis protein FlhA | VF |
| C3029_RS04930 () | 1012156..1012941 | + | 786 | WP_000207564.1 | Chemotaxis protein LafU | VF |
| C3029_RS04935 () | 1013012..1014067 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| C3029_RS04940 () | 1014119..1014412 | + | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| C3029_RS04945 () | 1014415..1014813 | + | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| C3029_RS04950 () | 1014823..1015275 | + | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| C3029_RS04955 () | 1015521..1015724 | + | 204 | Protein_920 | RNA ligase RtcB family protein | - |
| C3029_RS04960 () | 1015723..1016244 | + | 522 | Protein_921 | peptide chain release factor H | - |
| C3029_RS04965 () | 1016301..1017758 | - | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| C3029_RS04970 () | 1018019..1018477 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| C3029_RS04975 () | 1018569..1019813 | + | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 1019073..1019153 | + | 81 | NuclAT_13 | - | - |
| - () | 1019073..1019153 | + | 81 | NuclAT_13 | - | - |
| - () | 1019073..1019153 | + | 81 | NuclAT_13 | - | - |
| - () | 1019073..1019153 | + | 81 | NuclAT_13 | - | - |
| C3029_RS04980 () | 1019871..1020272 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| C3029_RS04985 () | 1020398..1021095 | + | 698 | Protein_926 | IS1 family transposase IS1R | Transposase |
| C3029_RS04990 () | 1021106..1022143 | - | 1038 | WP_000749880.1 | phosphoporin PhoE | - |
| C3029_RS04995 () | 1022431..1023534 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| C3029_RS05000 () | 1023546..1024799 | + | 1254 | WP_000893272.1 | glutamate-5-semialdehyde dehydrogenase | - |
| C3029_RS05010 () | 1025116..1025454 | - | 339 | Protein_930 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|