MGE detailed information
MGE type: Genomic_island MGE length: 14217 bp
Accession: NZ_CP014268 Location: 2265178..2279394 Organism: Escherichia coli B strain C2566 Replicon: chromosome
Accession: NZ_CP014268 Location: 2265178..2279394 Organism: Escherichia coli B strain C2566 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2566_RS11265 () | 2261993..2263678 | - | 1686 | WP_000628583.1 | ABC transporter ATP-binding protein/permease | - |
| C2566_RS24660 () | 2263881..2264003 | + | 123 | WP_120795387.1 | protein YneP | - |
| C2566_RS11270 () | 2263969..2265126 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| C2566_RS11275 () | 2265178..2266860 | - | 1683 | WP_001318307.1 | sulfatase | - |
| C2566_RS11280 () | 2267262..2268023 | - | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| C2566_RS11285 () | 2268098..2268295 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| C2566_RS11290 () | 2268543..2270822 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| C2566_RS11295 () | 2271156..2272070 | - | 915 | WP_000520676.1 | hypothetical protein | VF |
| C2566_RS11300 () | 2272129..2272632 | - | 504 | WP_000825452.1 | hypothetical protein | VF |
| C2566_RS11305 () | 2272645..2273175 | - | 531 | WP_000876763.1 | hypothetical protein | VF |
| C2566_RS25045 () | 2273189..2275839 | - | 2651 | Protein_2147 | fimbrial biogenesis outer membrane usher protein | - |
| C2566_RS11325 () | 2275881..2276591 | - | 711 | Protein_2148 | hypothetical protein | VF |
| C2566_RS11330 () | 2276952..2277434 | - | 483 | WP_000931227.1 | hypothetical protein | VF |
| C2566_RS11335 () | 2277806..2279128 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| C2566_RS11340 () | 2279128..2279394 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| C2566_RS11345 () | 2279617..2281197 | - | 1581 | Protein_2152 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| C2566_RS11350 () | 2281193..2281969 | + | 777 | Protein_2153 | histidine kinase | - |
| C2566_RS11355 () | 2281981..2283003 | + | 1023 | WP_000172488.1 | autoinducer 2 ABC transporter substrate-binding protein LsrB | - |
| C2566_RS11360 () | 2283030..2283905 | + | 876 | WP_000774188.1 | 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | - |
| C2566_RS11365 () | 2283929..2284219 | + | 291 | WP_000558527.1 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.009 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.009 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.009 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.009 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.009 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.009 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.009 |