NZ_CP0142011711671..1895542

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 183872 bp
Accession: NZ_CP014201        Location: 1711671..1895542         Organism: Lacticaseibacillus rhamnosus strain BFE5264       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AWJ15_RS08625 () 1707992..1709491 - 1500 WP_005711014.1 lysine--tRNA ligase -
AWJ15_RS08630 () 1709639..1710640 - 1002 WP_064556482.1 tRNA dihydrouridine synthase DusB -
AWJ15_RS08635 () 1710703..1711587 - 885 WP_064519864.1 Hsp33 family molecular chaperone HslO -
AWJ15_RS08640 () 1711731..1713134 - 1404 WP_014568964.1 ISLre2 family transposase ISLrh4 Transposase
AWJ15_RS08645 () 1713492..1715642 - 2151 WP_014570130.1 ATP-dependent zinc metalloprotease FtsH -
AWJ15_RS08650 () 1715704..1716249 - 546 WP_024129392.1 hypoxanthine phosphoribosyltransferase -
AWJ15_RS08655 () 1716249..1717556 - 1308 WP_077069590.1 tRNA lysidine(34) synthetase TilS -
AWJ15_RS08660 () 1717677..1718156 - 480 WP_005711034.1 RNA-binding protein S1 -
AWJ15_RS08665 () 1718440..1718841 - 402 WP_005686613.1 septum formation initiator family protein -
AWJ15_RS08670 () 1718934..1719197 - 264 WP_005686616.1 RNA-binding S4 domain-containing protein -
AWJ15_RS08675 () 1719204..1720778 - 1575 WP_031546611.1 polysaccharide biosynthesis protein -
AWJ15_RS08680 () 1720856..1724383 - 3528 WP_077069591.1 transcription-repair coupling factor -
AWJ15_RS08685 () 1724459..1725016 - 558 WP_005699529.1 aminoacyl-tRNA hydrolase -
AWJ15_RS08690 () 1725450..1726457 + 1008 WP_003662706.1 L-lactate dehydrogenase -
AWJ15_RS08695 () 1726869..1728239 + 1371 WP_005686622.1 peptidoglycan binding domain-containing protein -
AWJ15_RS08700 () 1728368..1728904 - 537 WP_005686623.1 PadR family transcriptional regulator -
AWJ15_RS08705 () 1729051..1730502 + 1452 WP_005686624.1 Serine endoprotease DegS VF
AWJ15_RS08710 () 1730566..1731162 + 597 WP_005686625.1 NAD(P)H-dependent oxidoreductase -
AWJ15_RS08715 () 1731331..1731996 + 666 WP_005686626.1 CBS domain-containing protein -
AWJ15_RS08720 () 1732293..1732991 + 699 WP_005686627.1 L,D-transpeptidase -
AWJ15_RS08725 () 1733071..1734507 - 1437 WP_005686628.1 glutamate synthase subunit beta -
AWJ15_RS08730 () 1734572..1739038 - 4467 WP_077069592.1 glutamate synthase large subunit -
AWJ15_RS08735 () 1739335..1739862 - 528 WP_005686630.1 QueT transporter family protein -
AWJ15_RS08740 () 1739900..1740097 - 198 WP_064536013.1 hypothetical protein -
AWJ15_RS08750 () 1740299..1740682 - 384 WP_005686631.1 type II toxin-antitoxin system PemK/MazF family toxin Toxin Detail
AWJ15_RS08755 () 1740702..1740950 - 249 WP_005686632.1 antitoxin Antitoxin Detail
AWJ15_RS08760 () 1741062..1742201 - 1140 WP_005686633.1 alanine racemase -
AWJ15_RS08765 () 1742188..1742562 - 375 WP_005686634.1 holo-ACP synthase -
AWJ15_RS08770 () 1742731..1744239 - 1509 WP_005686635.1 DEAD/DEAH box helicase -
AWJ15_RS08775 () 1744513..1745901 - 1389 WP_005686636.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase -
AWJ15_RS08780 () 1746048..1746812 - 765 WP_005686637.1 hypothetical protein -
AWJ15_RS08785 () 1747014..1747655 + 642 WP_005686638.1 SMI1/KNR4 family protein -
AWJ15_RS08790 () 1747671..1748345 - 675 WP_005686639.1 hypothetical protein -
AWJ15_RS08795 () 1748600..1749028 + 429 WP_005686640.1 hypothetical protein -
AWJ15_RS08800 () 1749793..1753599 + 3807 Protein_1603 Cys-Gln thioester bond-forming surface protein -
AWJ15_RS08805 () 1753601..1753843 + 243 WP_010491217.1 hypothetical protein -
AWJ15_RS08810 () 1753885..1754208 + 324 WP_031546599.1 DUF961 family protein -
AWJ15_RS08815 () 1754226..1754597 + 372 WP_031546597.1 YdcP family protein -
AWJ15_RS08820 () 1754676..1754939 + 264 WP_010491211.1 hypothetical protein -
AWJ15_RS08825 () 1754950..1755189 + 240 WP_031546595.1 hypothetical protein -
AWJ15_RS08830 () 1755224..1755472 + 249 WP_010491207.1 hypothetical protein -
AWJ15_RS08835 () 1755492..1755779 + 288 WP_031546592.1 hypothetical protein -
AWJ15_RS08840 () 1755776..1757143 + 1368 WP_031546590.1 DNA translocase FtsK -
AWJ15_RS08845 () 1757154..1757429 + 276 WP_010491202.1 hypothetical protein -
AWJ15_RS08850 () 1757426..1757686 + 261 WP_031546588.1 hypothetical protein -
AWJ15_RS08855 () 1758002..1759192 + 1191 WP_031546586.1 XRE family transcriptional regulator -
AWJ15_RS08860 () 1759182..1759508 + 327 WP_031546584.1 hypothetical protein -
AWJ15_RS08865 () 1759639..1760373 + 735 WP_031546582.1 site-specific DNA-methyltransferase -
AWJ15_RS08870 () 1760472..1760693 + 222 WP_003606383.1 hypothetical protein -
AWJ15_RS08875 () 1760697..1761194 + 498 WP_031546580.1 antirestriction protein ArdA -
AWJ15_RS08880 () 1761256..1761648 + 393 WP_010491186.1 conjugal transfer protein -
AWJ15_RS08885 () 1761632..1764097 + 2466 WP_031546577.1 ATP-binding protein -
AWJ15_RS08890 () 1764084..1766176 + 2093 Protein_1621 conjugal transfer protein -
AWJ15_RS08895 () 1766173..1767167 + 995 Protein_1622 lysozyme family protein -
AWJ15_RS08900 () 1767177..1767710 + 534 WP_031546575.1 hypothetical protein -
AWJ15_RS08905 () 1767707..1768630 + 924 WP_031546573.1 conjugal transfer protein -
AWJ15_RS08910 () 1768802..1769434 - 633 Protein_1625 IS30 family transposase ISApl1 Transposase
AWJ15_RS08915 () 1769503..1770185 + 683 Protein_1626 IS6 family transposase -
AWJ15_RS08920 () 1770537..1773239 - 2703 WP_031546567.1 family 15 glucoamylase -
AWJ15_RS08925 () 1773366..1774133 - 768 Protein_1628 IS30 family transposase ISLpl1 Transposase
AWJ15_RS08930 () 1774254..1775144 - 891 Protein_1629 IS3 family transposase IS153 Transposase
AWJ15_RS08940 () 1775150..1775401 - 252 WP_002816285.1 IS3 family transposase IS153 Transposase
AWJ15_RS08945 () 1775481..1776260 + 780 Protein_1631 DNA topoisomerase III -
AWJ15_RS08950 () 1776247..1777149 - 903 Protein_1632 alpha,alpha-phosphotrehalase -
AWJ15_RS08955 () 1777201..1777917 - 717 WP_031547201.1 trehalose operon repressor -
AWJ15_RS08965 () 1778479..1779161 - 683 Protein_1634 IS6 family transposase -
AWJ15_RS08975 () 1779456..1780562 + 1107 WP_031547198.1 DeoR family transcriptional regulator -
AWJ15_RS08980 () 1780756..1781136 + 381 WP_022669518.1 DUF1722 domain-containing protein -
AWJ15_RS08985 () 1781331..1781714 + 384 Protein_1637 ISLre2 family transposase ISLrh4 Transposase
AWJ15_RS16185 () 1781773..1782559 + 787 Protein_1638 IS5 family transposase -
AWJ15_RS09010 () 1782594..1782803 - 210 WP_032962076.1 hypothetical protein -
AWJ15_RS09015 () 1783081..1783638 - 558 WP_077069597.1 hypothetical protein -
AWJ15_RS09020 () 1783839..1785167 - 1329 WP_003591692.1 glycoside-pentoside-hexuronide (GPH):cation symporter -
AWJ15_RS09025 () 1785335..1785922 - 588 WP_032962027.1 Tn3 family transposase TnpR_ISPa40 Transposase
AWJ15_RS09030 () 1786084..1786512 + 429 WP_003582348.1 hypothetical protein -
AWJ15_RS16690 () 1786760..1786870 - 111 Protein_1644 IS30 family transposase -
AWJ15_RS09035 () 1786982..1787901 + 920 Protein_1645 IS30 family transposase ISLpl1 Transposase
AWJ15_RS09040 () 1788059..1788301 + 243 WP_003572054.1 IS3 family transposase ISRgn1 Transposase
AWJ15_RS09045 () 1788348..1788998 + 651 WP_032962024.1 hypothetical protein VF
AWJ15_RS09050 () 1788995..1789750 + 756 WP_003572050.1 iron export ABC transporter permease subunit FetB -
AWJ15_RS09055 () 1789879..1790562 - 684 Protein_1649 IS6 family transposase ISBth20 Transposase
AWJ15_RS16190 () 1790622..1790807 + 186 Protein_1650 hypothetical protein -
AWJ15_RS09065 () 1790910..1791140 + 231 WP_032962113.1 hypothetical protein -
AWJ15_RS09070 () 1791160..1791663 + 504 WP_012537722.1 hypothetical protein -
AWJ15_RS09075 () 1791776..1792426 + 651 WP_003586220.1 Tn3 family transposase TnpR_ISPa40 Transposase
AWJ15_RS09080 () 1792432..1792716 + 285 WP_002819966.1 BRCT domain-containing protein -
AWJ15_RS09090 () 1793140..1794558 + 1419 WP_077069598.1 IS5 family transposase ISLrh2 Transposase
AWJ15_RS09095 () 1794697..1795625 - 929 Protein_1656 IS30 family transposase ISLpl1 Transposase
AWJ15_RS09105 () 1796089..1797000 + 912 WP_014571624.1 cysteine synthase family protein -
AWJ15_RS09110 () 1797042..1798226 + 1185 WP_032953848.1 PLP-dependent aspartate aminotransferase family protein -
AWJ15_RS09115 () 1798192..1798701 + 510 WP_014571622.1 hypothetical protein VF
AWJ15_RS09120 () 1798917..1800092 - 1176 WP_031547296.1 IS256 family transposase IS1310 Transposase
AWJ15_RS09135 () 1801533..1802547 - 1015 Protein_1662 IS30 family transposase ISSag3 Transposase
AWJ15_RS16485 () 1802651..1802770 + 120 Protein_1663 IS5/IS1182 family transposase -
AWJ15_RS09140 () 1803124..1803633 - 510 WP_016386516.1 DUF308 domain-containing protein -
AWJ15_RS09145 () 1803806..1803937 + 132 Protein_1665 IS30 family transposase IS1382 Transposase
AWJ15_RS09150 () 1804028..1805042 + 1015 Protein_1666 IS30 family transposase ISSag3 Transposase
AWJ15_RS09155 () 1805243..1806151 - 909 WP_003554840.1 magnesium transporter CorA family protein -
AWJ15_RS09160 () 1806308..1806562 - 255 Protein_1668 divalent metal cation transporter -
AWJ15_RS16490 () 1806576..1807374 - 799 Protein_1669 IS5 family transposase -
AWJ15_RS16200 () 1807524..1807718 + 195 Protein_1670 transposase -
AWJ15_RS09180 () 1807896..1809392 - 1497 WP_014569018.1 IS5 family transposase ISLrh2 Transposase
AWJ15_RS09185 () 1809719..1811833 + 2115 WP_032962056.1 hypothetical protein VF
AWJ15_RS09195 () 1812138..1812527 + 390 WP_032962051.1 hypothetical protein -
AWJ15_RS09200 () 1812651..1814054 + 1404 WP_014568964.1 ISLre2 family transposase ISLrh4 Transposase
AWJ15_RS09205 () 1814514..1815197 - 684 WP_002816607.1 IS6 family transposase ISBth20 Transposase
AWJ15_RS09210 () 1815271..1815573 + 303 Protein_1676 restriction endonuclease subunit S -
AWJ15_RS16500 () 1815759..1815848 + 90 WP_021353390.1 putative holin-like toxin -
AWJ15_RS09220 () 1816003..1817127 - 1125 WP_031546167.1 hypothetical protein -
AWJ15_RS09225 () 1817131..1817346 - 216 WP_010491013.1 hypothetical protein -
AWJ15_RS09230 () 1817469..1819604 - 2136 Protein_1680 DNA topoisomerase III -
AWJ15_RS09235 () 1819611..1820021 - 411 WP_031546164.1 hypothetical protein -
AWJ15_RS09240 () 1820036..1820371 - 336 Protein_1682 conjugal transfer protein -
AWJ15_RS09245 () 1820495..1821385 - 891 Protein_1683 IS3 family transposase IS153 Transposase
AWJ15_RS09255 () 1821391..1821642 - 252 WP_002816285.1 IS3 family transposase IS153 Transposase
AWJ15_RS09260 () 1821726..1821971 + 246 Protein_1685 IS5 family transposase ISLca2 Transposase
AWJ15_RS09265 () 1821980..1822486 + 507 Protein_1686 ISL3 family transposase IS1165 Transposase
AWJ15_RS09270 () 1822562..1823245 + 684 Protein_1687 IS6 family transposase -
AWJ15_RS09275 () 1823573..1823971 + 399 WP_077069603.1 RNA polymerase subunit sigma-70 -
AWJ15_RS09280 () 1823992..1824249 + 258 WP_019899265.1 helix-turn-helix domain-containing protein -
AWJ15_RS09285 () 1824599..1824871 + 273 WP_010490992.1 helix-turn-helix domain-containing protein -
AWJ15_RS09290 () 1824923..1826002 + 1080 Protein_1691 hypothetical protein ; Integrase Integrase
AWJ15_RS09295 () 1826137..1827555 + 1419 WP_070543786.1 IS5 family transposase ISLrh2 Transposase
AWJ15_RS09300 () 1827888..1828139 - 252 WP_005691061.1 type B 50S ribosomal protein L31 -
AWJ15_RS09305 () 1828236..1829495 - 1260 WP_005686643.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
AWJ15_RS09310 () 1829573..1829806 - 234 WP_155772852.1 ATP-dependent nuclease subunit B -
AWJ15_RS09315 () 1829986..1831590 - 1605 WP_005686647.1 CTP synthase -
AWJ15_RS09320 () 1831853..1833310 + 1458 WP_032961799.1 ISNCY family transposase ISSeq2 Transposase
AWJ15_RS09325 () 1833676..1834863 + 1188 WP_005685266.1 NAD(P)/FAD-dependent oxidoreductase -
AWJ15_RS09335 () 1835556..1836431 - 876 WP_005685263.1 DUF1211 domain-containing protein -
AWJ15_RS09340 () 1836658..1837338 - 681 WP_005713414.1 DNA-directed RNA polymerase subunit delta -
AWJ15_RS09345 () 1837382..1837828 - 447 WP_005685261.1 DUF1934 domain-containing protein -
AWJ15_RS09355 () 1838199..1839047 + 849 WP_032964331.1 lipoate--protein ligase -
AWJ15_RS09360 () 1839037..1840389 + 1353 WP_077069606.1 HD domain-containing protein -
AWJ15_RS09365 () 1840401..1840853 - 453 WP_005685256.1 NUDIX hydrolase -
AWJ15_RS09370 () 1840925..1841884 + 960 Protein_1705 YdcF family protein -
AWJ15_RS09375 () 1841897..1843393 - 1497 WP_014569018.1 IS5 family transposase ISLrh2 Transposase
AWJ15_RS16695 () 1843427..1843564 + 138 WP_191981983.1 hypothetical protein -
AWJ15_RS09380 () 1843627..1844007 + 381 WP_005714120.1 large-conductance mechanosensitive channel protein MscL -
AWJ15_RS09385 () 1844159..1844593 - 435 WP_005716693.1 hypothetical protein -
AWJ15_RS09390 () 1844682..1845011 - 330 WP_077069607.1 ASCH domain-containing protein -
AWJ15_RS09395 () 1845108..1846082 - 975 WP_005691037.1 ribose-phosphate diphosphokinase -
AWJ15_RS09400 () 1846180..1847568 - 1389 WP_064520135.1 hypothetical protein VF
AWJ15_RS09410 () 1847902..1849107 - 1206 WP_049173594.1 VanZ family protein -
AWJ15_RS09415 () 1849104..1849952 - 849 WP_049173596.1 pur operon repressor -
AWJ15_RS09420 () 1850174..1850824 + 651 WP_005685245.1 hypothetical protein VF
AWJ15_RS09425 () 1850821..1851582 + 762 WP_005685244.1 iron export ABC transporter permease subunit FetB -
AWJ15_RS09430 () 1851675..1852553 - 879 WP_005685242.1 cation diffusion facilitator family transporter -
AWJ15_RS09435 () 1852609..1853487 - 879 WP_005716698.1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase -
AWJ15_RS09440 () 1853733..1853984 - 252 WP_005685240.1 Veg family protein -
AWJ15_RS09455 () 1854330..1855214 - 885 WP_077069608.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -
AWJ15_RS09460 () 1855207..1855776 - 570 WP_005685238.1 ribonuclease M5 -
AWJ15_RS09465 () 1855773..1856552 - 780 WP_077069609.1 TatD family hydrolase -
AWJ15_RS09470 () 1856559..1857035 - 477 WP_014570140.1 PTS sugar transporter subunit IIA -
AWJ15_RS09475 () 1857265..1858263 + 999 WP_005685235.1 tagatose 1,6-diphosphate aldolase -
AWJ15_RS09490 () 1858685..1859566 + 882 WP_005685233.1 aldose 1-epimerase family protein -
AWJ15_RS09495 () 1859702..1860406 + 705 WP_005685232.1 LytTR family DNA-binding domain-containing protein -
AWJ15_RS09500 () 1860393..1861304 + 912 WP_005685231.1 sensor histidine kinase -
AWJ15_RS09505 () 1861358..1863184 + 1827 WP_005685229.1 hypothetical protein VF
AWJ15_RS09510 () 1863171..1865084 + 1914 WP_005716716.1 ABC transporter ATP-binding protein/permease -
AWJ15_RS09515 () 1865248..1865460 + 213 WP_005685226.1 hypothetical protein VF
AWJ15_RS09520 () 1865511..1865957 + 447 WP_005685225.1 hypothetical protein -
AWJ15_RS09525 () 1866016..1867998 - 1983 WP_005685224.1 methionine--tRNA ligase -
AWJ15_RS09530 () 1868292..1869170 - 879 WP_031546120.1 proline iminopeptidase-family hydrolase -
AWJ15_RS09545 () 1869707..1870519 - 813 WP_005685221.1 DUF72 domain-containing protein -
AWJ15_RS09550 () 1870512..1870991 - 480 WP_005685220.1 8-oxo-dGTP diphosphatase -
AWJ15_RS09555 () 1871149..1872054 - 906 WP_005685219.1 L-2-hydroxyisocaproate dehydrogenase -
AWJ15_RS09560 () 1872079..1872675 - 597 WP_029607686.1 DUF1211 domain-containing protein -
AWJ15_RS09565 () 1872710..1873402 - 693 WP_005716724.1 NAD-dependent protein deacylase -
AWJ15_RS16505 () 1873621..1873767 + 147 WP_005685216.1 hypothetical protein -
AWJ15_RS09570 () 1873764..1874690 - 927 WP_077069610.1 hypothetical protein -
AWJ15_RS09575 () 1874822..1875331 + 510 WP_005685214.1 YbhB/YbcL family Raf kinase inhibitor-like protein -
AWJ15_RS09580 () 1875434..1875709 - 276 WP_031546116.1 hypothetical protein -
AWJ15_RS09585 () 1875762..1876745 - 984 WP_005685212.1 DUF1002 domain-containing protein -
AWJ15_RS09590 () 1876838..1877779 - 942 WP_005685211.1 exopolyphosphatase -
AWJ15_RS09595 () 1877776..1879938 - 2163 WP_005685209.1 RNA degradosome polyphosphate kinase -
AWJ15_RS09600 () 1879935..1881464 - 1530 WP_005685207.1 exopolyphosphatase -
AWJ15_RS09605 () 1881825..1882757 + 933 WP_005685206.1 aldo/keto reductase -
AWJ15_RS09610 () 1882852..1883676 + 825 WP_005685204.1 methyltransferase domain-containing protein -
AWJ15_RS09615 () 1883695..1884189 + 495 WP_005685202.1 GNAT family N-acetyltransferase -
AWJ15_RS09620 () 1884324..1885679 - 1356 WP_005685201.1 MATE family efflux transporter -
AWJ15_RS16510 () 1885921..1886028 + 108 WP_121497138.1 Malolactic regulator -
AWJ15_RS09630 () 1886224..1887090 - 867 WP_005685200.1 TPM domain-containing protein -
AWJ15_RS09635 () 1887099..1887707 - 609 WP_005685199.1 LemA family protein -
AWJ15_RS09640 () 1887860..1888876 - 1017 WP_005685198.1 tryptophan--tRNA ligase -
AWJ15_RS09645 () 1889412..1890647 - 1236 Protein_1755 MFS transporter -
AWJ15_RS09650 () 1891530..1892855 - 1326 WP_077069941.1 NAD(P)/FAD-dependent oxidoreductase -
AWJ15_RS09655 () 1892861..1893820 - 960 WP_005690949.1 hypothetical protein VF
AWJ15_RS09660 () 1893820..1895352 - 1533 WP_077069611.1 ABC transporter permease/substrate-binding protein -
AWJ15_RS09665 () 1895490..1896893 - 1404 WP_077069612.1 ISLre2-like element ISLrh4 family transposase -
AWJ15_RS09670 () 1897046..1897246 + 201 WP_077069613.1 Malolactic regulator -
AWJ15_RS09675 () 1897349..1899637 + 2289 WP_077069614.1 ATP-binding domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance