MGE detailed information
MGE type: Conjugative plasmid MGE length: 115764 bp
Accession: NZ_CP014110 Location: 1..115764 Organism: Escherichia coli strain FDAARGOS_144 Replicon: plasmid unnamed1
Accession: NZ_CP014110 Location: 1..115764 Organism: Escherichia coli strain FDAARGOS_144 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL502_RS00040 () | 64..1052 | - | 989 | Protein_1 | conjugal transfer pilus assembly protein TraU | - |
| AL502_RS00045 () | 1049..1680 | - | 632 | Protein_2 | type-F conjugative transfer system protein TraW | - |
| AL502_RS00050 () | 1677..2063 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| AL502_RS00055 () | 2060..4690 | - | 2631 | WP_000069778.1 | type IV secretion system protein TraC | - |
| AL502_RS00065 () | 5057..5275 | - | 219 | WP_000556746.1 | hypothetical protein | - |
| AL502_RS00070 () | 5355..5828 | - | 474 | WP_000549566.1 | hypothetical protein | - |
| AL502_RS00075 () | 5821..6042 | - | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| AL502_RS00080 () | 6177..6692 | - | 516 | WP_000809889.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AL502_RS00085 () | 6689..6922 | - | 234 | WP_000235790.1 | conjugal transfer protein TrbG | - |
| AL502_RS00090 () | 6934..7287 | - | 354 | WP_071586423.1 | conjugal transfer protein TrbD | - |
| AL502_RS00095 () | 7241..7831 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| AL502_RS00100 () | 7821..9248 | - | 1428 | WP_000146665.1 | conjugal transfer protein TraB | - |
| AL502_RS00105 () | 9248..9952 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| AL502_RS00110 () | 9963..10529 | - | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| AL502_RS00115 () | 10551..10862 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| AL502_RS00120 () | 10877..11236 | - | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| AL502_RS00125 () | 11270..11497 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| AL502_RS00130 () | 11591..12277 | - | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| AL502_RS00135 () | 12471..12854 | - | 384 | WP_001151562.1 | relaxosome protein TraM | - |
| AL502_RS00140 () | 13185..13787 | + | 603 | WP_001323326.1 | hypothetical protein | VF |
| AL502_RS00145 () | 14083..14904 | - | 822 | WP_001234489.1 | DUF945 domain-containing protein | - |
| AL502_RS00150 () | 15023..15310 | - | 288 | WP_000107526.1 | hypothetical protein | - |
| AL502_RS00170 () | 16226..16384 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 16449..16648 | - | 200 | NuclAT_0 | - | - |
| - () | 16449..16648 | - | 200 | NuclAT_0 | - | - |
| - () | 16449..16648 | - | 200 | NuclAT_0 | - | - |
| - () | 16449..16648 | - | 200 | NuclAT_0 | - | - |
| AL502_RS00175 () | 16660..17379 | - | 720 | WP_001276230.1 | plasmid SOS inhibition protein A | - |
| AL502_RS00180 () | 17376..17810 | - | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| AL502_RS00185 () | 17865..19823 | - | 1959 | WP_001145501.1 | ParB/RepB/Spo0J family partition protein | - |
| AL502_RS00190 () | 19882..20115 | - | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| AL502_RS00195 () | 20172..20699 | - | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| AL502_RS00205 () | 21001..21453 | + | 453 | WP_024185774.1 | hypothetical protein | - |
| AL502_RS00215 () | 21539..22102 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| AL502_RS00220 () | 22149..23510 | - | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| AL502_RS00225 () | 23562..23792 | - | 231 | WP_000155844.1 | hypothetical protein | - |
| AL502_RS26440 () | 24305..24785 | + | 481 | Protein_33 | hypothetical protein | - |
| AL502_RS26445 () | 24755..24946 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| AL502_RS00245 () | 24943..25365 | - | 423 | WP_000271708.1 | DUF1380 family protein | - |
| AL502_RS00250 () | 25412..25714 | - | 303 | WP_001666994.1 | antirestriction protein | - |
| AL502_RS26095 () | 26253..27023 | - | 771 | WP_001004562.1 | hypothetical protein | - |
| AL502_RS00260 () | 27068..27502 | - | 435 | WP_000274508.1 | DUF1380 family protein | - |
| AL502_RS00265 () | 27516..27737 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| AL502_RS00270 () | 27738..28421 | - | 684 | WP_000086169.1 | DNA methylase | - |
| AL502_RS00275 () | 28497..28808 | - | 312 | WP_001310011.1 | hypothetical protein | - |
| AL502_RS00280 () | 28805..29008 | - | 204 | WP_001298677.1 | hypothetical protein | - |
| AL502_RS00285 () | 29049..30221 | + | 1173 | WP_000952372.1 | IS21 family transposase IS21 | Transposase |
| AL502_RS00290 () | 30221..31018 | + | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| AL502_RS00295 () | 31012..31842 | - | 831 | WP_001298676.1 | DUF1281 domain-containing protein | - |
| AL502_RS00305 () | 32261..33481 | - | 1221 | WP_000343766.1 | ISL3 family transposase ISEc53 | Transposase |
| AL502_RS00310 () | 33500..34018 | - | 519 | WP_000115885.1 | hypothetical protein | VF |
| AL502_RS00320 () | 34153..34401 | + | 249 | WP_000619112.1 | DinI-like family protein | - |
| AL502_RS00325 () | 34398..34835 | + | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AL502_RS00330 () | 34835..36105 | + | 1271 | Protein_50 | translesion error-prone DNA polymerase V subunit UmuC | - |
| AL502_RS00335 () | 36110..36502 | - | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| AL502_RS00340 () | 36507..37478 | - | 972 | WP_001103694.1 | hypothetical protein | - |
| AL502_RS00345 () | 37707..38351 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| AL502_RS00350 () | 38345..38620 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| AL502_RS00355 () | 38758..39567 | - | 810 | WP_000016979.1 | site-specific integrase | - |
| AL502_RS00360 () | 39568..39873 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AL502_RS00365 () | 39875..40093 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AL502_RS00375 () | 41745..43118 | - | 1374 | WP_000244358.1 | IS4 family transposase ISEc13 | Transposase |
| AL502_RS00385 () | 43973..44614 | + | 642 | WP_000990667.1 | hypothetical protein | - |
| AL502_RS00400 () | 45789..46766 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| AL502_RS00405 () | 47009..47749 | - | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| AL502_RS00410 () | 47870..48058 | - | 189 | WP_001332784.1 | hypothetical protein | - |
| AL502_RS00415 () | 48425..49594 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| AL502_RS00420 () | 49820..49995 | - | 176 | Protein_64 | IS3 family transposase | - |
| AL502_RS00425 () | 50441..50713 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| AL502_RS00430 () | 51238..51674 | - | 437 | Protein_66 | IS3 family transposase IS2 | Transposase |
| AL502_RS00435 () | 51956..53926 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| AL502_RS00440 () | 53933..54724 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| AL502_RS00445 () | 54787..55395 | - | 609 | Protein_69 | IS66 family transposase ISEc22 | Transposase |
| AL502_RS00450 () | 55463..56245 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| AL502_RS00455 () | 56242..57264 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| AL502_RS00460 () | 57350..58285 | - | 936 | Protein_72 | IS66 family transposase ISEc22 | Transposase |
| AL502_RS00465 () | 58334..58681 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| AL502_RS00470 () | 58678..59082 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| AL502_RS00475 () | 59111..59494 | - | 384 | Protein_75 | IS3 family transposase IS629 | Transposase |
| AL502_RS00480 () | 59584..61092 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| AL502_RS00490 () | 61765..62504 | - | 740 | Protein_77 | IS3 family transposase IS629 | Transposase |
| AL502_RS00495 () | 62606..62866 | + | 261 | WP_000371882.1 | hypothetical protein | - |
| AL502_RS00500 () | 62863..63372 | + | 510 | WP_000194542.1 | hypothetical protein | - |
| AL502_RS00505 () | 63392..63739 | - | 348 | WP_000142452.1 | hypothetical protein | - |
| AL502_RS00515 () | 63868..64203 | + | 336 | WP_001080732.1 | colicin transporter | - |
| AL502_RS00535 () | 65655..66341 | + | 687 | Protein_82 | primase alpha helix C-terminal domain-containing protein | - |
| AL502_RS00540 () | 66673..67548 | + | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| AL502_RS00545 () | 67556..68332 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| AL502_RS00550 () | 68501..70762 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| AL502_RS00555 () | 70831..72006 | + | 1176 | WP_001020413.1 | putative protein YncE | VF |
| AL502_RS00565 () | 72529..72834 | - | 306 | Protein_87 | IS91 family transposase ISSbo1 | Transposase |
| AL502_RS00570 () | 72860..73437 | + | 578 | Protein_88 | IS3 family transposase IS629 | Transposase |
| AL502_RS00575 () | 73328..74083 | - | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| AL502_RS00580 () | 74080..75579 | - | 1500 | WP_000143800.1 | IS21 family transposase ISEc10 | Transposase |
| AL502_RS00585 () | 75665..76015 | + | 351 | Protein_91 | IS3 family transposase IS629 | Transposase |
| AL502_RS26450 () | 76688..77002 | + | 315 | Protein_92 | IS5 family transposase ISKpn26 | Transposase |
| AL502_RS26455 () | 77003..77176 | + | 174 | Protein_93 | IS5 family transposase ISKpn26 | Transposase |
| AL502_RS00600 () | 77326..77959 | - | 634 | Protein_94 | histidine-type phosphatase | - |
| AL502_RS00605 () | 78081..78566 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| AL502_RS00610 () | 78591..79076 | - | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| AL502_RS00615 () | 79063..79758 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| AL502_RS00620 () | 79763..80893 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| AL502_RS00625 () | 80883..82166 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| AL502_RS00630 () | 82169..83548 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| AL502_RS00635 () | 83652..84179 | - | 528 | WP_000178050.1 | iron transporter | - |
| AL502_RS00640 () | 84220..86106 | - | 1887 | WP_001332815.1 | FTR1 family iron permease | - |
| AL502_RS00650 () | 86453..87268 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| AL502_RS00655 () | 87451..87957 | - | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| AL502_RS00660 () | 87947..88174 | - | 228 | WP_077459403.1 | DsbA family protein | - |
| AL502_RS00670 () | 88204..88908 | - | 705 | WP_001067837.1 | IS6 family transposase IS26 | Transposase |
| AL502_RS00685 () | 89964..90821 | - | 858 | WP_000131004.1 | incFII family plasmid replication initiator RepA | - |
| AL502_RS00690 () | 90814..90888 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AL502_RS00700 () | 91121..91381 | - | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| AL502_RS00705 () | 91621..92211 | - | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| AL502_RS00710 () | 92249..92458 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| AL502_RS00715 () | 92504..92965 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| AL502_RS00720 () | 93210..93422 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| AL502_RS00725 () | 93551..94111 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| AL502_RS00730 () | 94214..95074 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| AL502_RS00735 () | 95133..95879 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| AL502_RS00740 () | 95899..101169 | - | 5271 | WP_000948349.1 | Multifunctional conjugation protein TraI | Relaxase |
| AL502_RS00745 () | 101169..103313 | - | 2145 | WP_000009347.1 | type IV conjugative transfer system coupling protein TraD | - |
| AL502_RS00750 () | 103364..104101 | - | 738 | WP_000199901.1 | hypothetical protein | - |
| AL502_RS00755 () | 104304..105035 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| AL502_RS00760 () | 105084..105569 | - | 486 | WP_000605869.1 | hypothetical protein | - |
| AL502_RS00765 () | 105585..108407 | - | 2823 | WP_001007080.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AL502_RS00770 () | 108404..109777 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| AL502_RS00775 () | 109764..110189 | - | 426 | WP_001323332.1 | F-type conjugal transfer protein TrbF | - |
| AL502_RS00780 () | 110137..110484 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| AL502_RS00785 () | 110414..110959 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AL502_RS00790 () | 110946..111230 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AL502_RS00795 () | 111311..111646 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| AL502_RS00800 () | 111627..111968 | - | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| AL502_RS00805 () | 111982..112725 | - | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AL502_RS00810 () | 112718..112975 | - | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| AL502_RS00815 () | 113002..114852 | - | 1851 | WP_000821859.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AL502_RS00820 () | 114849..115517 | - | 669 | WP_104731913.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|