MGE detailed information
MGE type: Genomic_island MGE length: 12975 bp
Accession: NZ_CP014099 Location: 2552176..2565150 Organism: Shigella sonnei strain FDAARGOS_90 Replicon: chromosome
Accession: NZ_CP014099 Location: 2552176..2565150 Organism: Shigella sonnei strain FDAARGOS_90 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL477_RS13850 (2547334) | 2547334..2548389 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| AL477_RS13855 (2548460) | 2548460..2549245 | - | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| AL477_RS13860 (2549217) | 2549217..2550929 | + | 1713 | Protein_2555 | flagellar biosynthesis protein FlhA | - |
| AL477_RS13865 (2551052) | 2551052..2551549 | - | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| AL477_RS13870 (2551620) | 2551620..2551748 | - | 129 | Protein_2557 | ISAs1 family transposase | - |
| AL477_RS13875 (2551803) | 2551803..2552500 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| AL477_RS13880 (2552789) | 2552789..2553562 | - | 774 | WP_127148796.1 | hypothetical protein | VF |
| AL477_RS13885 (2553748) | 2553748..2554008 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| AL477_RS13890 (2554011) | 2554011..2554289 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| AL477_RS13895 (2554445) | 2554445..2555185 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| AL477_RS13900 (2555156) | 2555156..2555923 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| AL477_RS13905 (2556129) | 2556129..2556707 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| AL477_RS13910 (2556947) | 2556947..2559391 | + | 2445 | WP_000973074.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| AL477_RS13915 (2559434) | 2559434..2559880 | - | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| AL477_RS13920 (2560061) | 2560061..2560831 | + | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| AL477_RS13925 (2560873) | 2560873..2562009 | - | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| AL477_RS13930 (2562478) | 2562478..2562855 | - | 378 | WP_001077737.1 | hypothetical protein | - |
| AL477_RS13935 (2562855) | 2562855..2563265 | - | 411 | WP_162772774.1 | hypothetical protein | - |
| AL477_RS13940 (2563303) | 2563303..2564439 | - | 1137 | Protein_2571 | ISAs1 family transposase ISEc1 | Transposase |
| AL477_RS13945 (2564701) | 2564701..2565150 | - | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| AL477_RS13950 (2565162) | 2565162..2569370 | - | 4209 | WP_000508696.1 | RHS element core protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|