MGE detailed information
MGE type: Prophage MGE length: 40174 bp
Accession: NZ_CP014099 Location: 1438987..1479160 Organism: Shigella sonnei strain FDAARGOS_90 Replicon: chromosome
Accession: NZ_CP014099 Location: 1438987..1479160 Organism: Shigella sonnei strain FDAARGOS_90 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL477_RS08085 () | 1434843..1435643 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| AL477_RS08090 () | 1435656..1436507 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| AL477_RS08095 () | 1436562..1437020 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| AL477_RS08100 () | 1437449..1438015 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| AL477_RS08105 () | 1438012..1438821 | - | 810 | WP_000010143.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| AL477_RS08110 () | 1438987..1439196 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| AL477_RS08115 () | 1439209..1439352 | - | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| AL477_RS08120 () | 1440022..1440309 | - | 288 | WP_001006860.1 | YebO family protein | - |
| AL477_RS08125 () | 1440384..1440527 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| AL477_RS08130 () | 1440686..1440925 | + | 240 | WP_061066733.1 | YobH family protein | - |
| AL477_RS08135 () | 1441068..1441859 | - | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| AL477_RS08140 () | 1442036..1443099 | + | 1064 | Protein_1457 | MFS transporter | - |
| AL477_RS08145 () | 1443145..1444026 | - | 882 | WP_000984517.1 | protease HtpX | - |
| AL477_RS08150 () | 1444218..1446266 | - | 2049 | WP_011310196.1 | carboxy terminal-processing peptidase | - |
| AL477_RS08155 () | 1446286..1446984 | - | 699 | WP_000431362.1 | RNA chaperone ProQ | - |
| AL477_RS08160 () | 1447081..1447578 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| AL477_RS08165 () | 1447708..1448991 | + | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| AL477_RS08170 () | 1448960..1451593 | + | 2634 | WP_005138565.1 | hypothetical protein | VF |
| AL477_RS08175 () | 1451674..1453113 | + | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| AL477_RS25920 () | 1453231..1453314 | + | 84 | Protein_1465 | DUF1480 family protein | - |
| AL477_RS08185 () | 1454086..1454244 | + | 159 | Protein_1467 | DUF1480 family protein | - |
| AL477_RS08190 () | 1454349..1454540 | + | 192 | WP_001296140.1 | YebW family protein | - |
| AL477_RS08195 () | 1454541..1454741 | - | 201 | Protein_1469 | serine/threonine-protein phosphatase | - |
| AL477_RS08205 () | 1455997..1456302 | - | 306 | Protein_1471 | serine/threonine-protein phosphatase | - |
| AL477_RS08210 () | 1456357..1457054 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| AL477_RS08215 () | 1457068..1457241 | - | 174 | Protein_1473 | metallophosphoesterase | - |
| AL477_RS08225 () | 1457892..1459048 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| AL477_RS08230 () | 1459250..1460965 | + | 1716 | WP_011310192.1 | hypothetical protein | VF |
| AL477_RS08245 () | 1462382..1462642 | + | 261 | WP_077447296.1 | excisionase | - |
| AL477_RS08250 () | 1462671..1463125 | + | 455 | Protein_1478 | IS1-like element IS1A family transposase | - |
| AL477_RS08255 () | 1463220..1464448 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| AL477_RS08260 () | 1464459..1464704 | + | 246 | Protein_1480 | IS1 family transposase IS1R | Transposase |
| AL477_RS08265 () | 1464741..1465817 | + | 1077 | WP_001189101.1 | hypothetical protein ; Integrase | Integrase |
| - | 1465948..1466182 | + | 235 | - | - | Antitoxin Detail |
| - | 1465949..1466052 | - | 104 | - | - | Toxin Detail |
| AL477_RS08270 () | 1466210..1466551 | - | 342 | WP_000976476.1 | YebY family protein | - |
| AL477_RS08275 () | 1466564..1467436 | - | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| AL477_RS08280 () | 1467440..1467814 | - | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| AL477_RS08285 () | 1467953..1468183 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| AL477_RS08290 () | 1468286..1468942 | + | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| AL477_RS08295 () | 1468966..1469628 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| AL477_RS08300 () | 1469625..1471685 | - | 2061 | WP_000936913.1 | oligopeptidase B | - |
| AL477_RS08305 () | 1471894..1472553 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| AL477_RS08310 () | 1472880..1473236 | - | 357 | WP_001295500.1 | protein YebF | - |
| AL477_RS08315 () | 1473303..1473593 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| AL477_RS08320 () | 1473727..1474905 | + | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| AL477_RS08325 () | 1474961..1475602 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| AL477_RS08330 () | 1475639..1477450 | - | 1812 | WP_001069438.1 | phosphogluconate dehydratase | - |
| AL477_RS08335 () | 1477685..1479160 | - | 1476 | WP_000301720.1 | glucose-6-phosphate dehydrogenase | - |
| AL477_RS08340 () | 1479498..1480367 | + | 870 | WP_001056711.1 | DNA-binding transcriptional regulator HexR | - |
| AL477_RS08345 () | 1480495..1481937 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| AL477_RS08350 () | 1481997..1482839 | - | 843 | WP_000546442.1 | Nif3-like dinuclear metal center hexameric protein | - |
| AL477_RS08360 () | 1483779..1484018 | + | 240 | WP_000961944.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|