MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 94478 bp
Accession: NZ_CP013993 Location: 5007879..5102356 Organism: Pseudomonas aeruginosa DHS01 strain DH01 Replicon: chromosome
Accession: NZ_CP013993 Location: 5007879..5102356 Organism: Pseudomonas aeruginosa DHS01 strain DH01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DPADHS01_RS23660 () | 5003367..5003978 | - | 612 | WP_004348355.1 | type 1 fimbrial protein | - |
| DPADHS01_RS23665 () | 5004422..5004799 | - | 378 | WP_003117019.1 | Hpt domain-containing protein | - |
| DPADHS01_RS23670 () | 5005384..5006022 | + | 639 | WP_023464500.1 | NUDIX hydrolase | - |
| DPADHS01_RS23675 () | 5006407..5006967 | + | 561 | WP_003117022.1 | hypothetical protein | - |
| DPADHS01_RS23680 () | 5007088..5007492 | - | 405 | WP_003112559.1 | acyl-CoA thioesterase | - |
| DPADHS01_RS23685 () | 5008016..5008882 | + | 867 | WP_003120956.1 | ParA family protein | - |
| DPADHS01_RS23690 () | 5008884..5009621 | + | 738 | WP_016852973.1 | hypothetical protein | - |
| DPADHS01_RS23695 () | 5009618..5010109 | + | 492 | WP_016852972.1 | hypothetical protein | - |
| DPADHS01_RS23700 () | 5010115..5010768 | + | 654 | WP_016852971.1 | hypothetical protein | - |
| DPADHS01_RS23705 () | 5010765..5011448 | + | 684 | WP_016852970.1 | hypothetical protein | - |
| DPADHS01_RS23710 () | 5011448..5012149 | + | 702 | WP_016852969.1 | DUF2786 domain-containing protein | - |
| DPADHS01_RS23715 () | 5012146..5012853 | + | 708 | WP_016852968.1 | HNH endonuclease | - |
| DPADHS01_RS23720 () | 5012837..5013055 | + | 219 | WP_003122068.1 | hypothetical protein | - |
| DPADHS01_RS23725 () | 5013052..5014395 | + | 1344 | WP_016852967.1 | replicative DNA helicase | - |
| DPADHS01_RS35090 () | 5014834..5015280 | - | 447 | WP_003117028.1 | hypothetical protein | - |
| DPADHS01_RS23735 () | 5015458..5015643 | + | 186 | WP_016852966.1 | hypothetical protein | - |
| DPADHS01_RS23740 () | 5015633..5016160 | + | 528 | WP_016852965.1 | hypothetical protein | - |
| DPADHS01_RS23745 () | 5016157..5016414 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| DPADHS01_RS23750 () | 5016407..5016646 | + | 240 | WP_016852964.1 | hypothetical protein | - |
| DPADHS01_RS23755 () | 5016639..5016872 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| DPADHS01_RS23760 () | 5016872..5017894 | + | 1023 | WP_019416389.1 | nucleoid-associated protein YejK | - |
| DPADHS01_RS23765 () | 5017891..5018781 | + | 891 | WP_016851600.1 | DNA adenine methylase | - |
| DPADHS01_RS23770 () | 5018802..5019071 | + | 270 | WP_003117035.1 | Arc family DNA-binding protein | - |
| DPADHS01_RS23775 () | 5019068..5020804 | + | 1737 | WP_023464346.1 | ParB family protein | - |
| DPADHS01_RS23780 () | 5020832..5021599 | + | 768 | WP_016851602.1 | DUF2857 domain-containing protein | - |
| DPADHS01_RS34355 () | 5021596..5022900 | + | 1305 | WP_023101569.1 | hypothetical protein | - |
| DPADHS01_RS35095 () | 5022906..5023925 | - | 1020 | WP_024100015.1 | hypothetical protein | - |
| DPADHS01_RS23795 () | 5023953..5024150 | + | 198 | WP_019396765.1 | hypothetical protein | - |
| DPADHS01_RS23800 () | 5024307..5025035 | + | 729 | WP_016851605.1 | TIGR03761 family integrating conjugative element protein | - |
| DPADHS01_RS23805 () | 5025041..5025589 | + | 549 | WP_016851606.1 | DUF3158 family protein | - |
| DPADHS01_RS23810 () | 5025637..5026467 | + | 831 | WP_012076855.1 | phage regulatory protein | - |
| DPADHS01_RS23815 () | 5026497..5026955 | + | 459 | WP_016851607.1 | single-stranded DNA-binding protein | - |
| DPADHS01_RS23820 () | 5027061..5027255 | + | 195 | WP_016851608.1 | hypothetical protein | - |
| DPADHS01_RS34370 () | 5027500..5027667 | + | 168 | WP_170323396.1 | CrpP family protein | - |
| DPADHS01_RS23825 () | 5027783..5029702 | + | 1920 | WP_023101571.1 | type I DNA topoisomerase | - |
| DPADHS01_RS23830 () | 5030009..5030218 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| DPADHS01_RS23835 () | 5030440..5032329 | + | 1890 | WP_016851610.1 | hypothetical protein | - |
| DPADHS01_RS23840 () | 5032326..5034302 | + | 1977 | WP_016851611.1 | DEAD/DEAH box helicase | - |
| DPADHS01_RS23845 () | 5034443..5034787 | + | 345 | WP_016851612.1 | hypothetical protein | - |
| DPADHS01_RS23850 () | 5034858..5035148 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| DPADHS01_RS23855 () | 5035145..5035444 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DPADHS01_RS23860 () | 5035646..5036770 | + | 1125 | WP_012076859.1 | hypothetical protein | VF |
| DPADHS01_RS23865 () | 5036770..5038479 | + | 1710 | WP_012076860.1 | Outer membrane lipoprotein BfpB | VF |
| DPADHS01_RS23870 () | 5038483..5039808 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| DPADHS01_RS23875 () | 5039798..5040331 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| DPADHS01_RS23880 () | 5040340..5041920 | + | 1581 | WP_003099761.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| DPADHS01_RS23885 () | 5041920..5042999 | + | 1080 | WP_023464343.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| DPADHS01_RS23890 () | 5043021..5043551 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| DPADHS01_RS23895 () | 5043548..5044504 | + | 957 | WP_003117051.1 | Twitching mobility protein | VF |
| DPADHS01_RS23900 () | 5044497..5045876 | + | 1380 | WP_003117053.1 | hypothetical protein | VF |
| DPADHS01_RS23905 () | 5045894..5046331 | + | 438 | WP_003117054.1 | hypothetical protein | VF |
| DPADHS01_RS35380 () | 5047394..5047639 | + | 246 | WP_003117055.1 | hypothetical protein | - |
| DPADHS01_RS35385 () | 5047714..5047887 | + | 174 | WP_003158172.1 | hypothetical protein | - |
| DPADHS01_RS23915 () | 5048348..5048827 | + | 480 | WP_003117056.1 | DUF3577 domain-containing protein | - |
| DPADHS01_RS35390 () | 5048965..5049123 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| DPADHS01_RS23920 () | 5049197..5049394 | + | 198 | WP_003117057.1 | hypothetical protein | - |
| DPADHS01_RS23930 () | 5049879..5050586 | + | 708 | WP_003117058.1 | hypothetical protein | - |
| DPADHS01_RS23935 () | 5050822..5051172 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| DPADHS01_RS23940 () | 5051229..5051861 | + | 633 | WP_003158170.1 | DUF3275 family protein | - |
| DPADHS01_RS23945 () | 5051858..5052133 | + | 276 | WP_003117060.1 | hypothetical protein | - |
| DPADHS01_RS23950 () | 5052203..5052565 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| DPADHS01_RS23955 () | 5052633..5052887 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| DPADHS01_RS23960 () | 5052980..5053585 | + | 606 | WP_003158169.1 | hypothetical protein | - |
| DPADHS01_RS23965 () | 5053615..5055060 | + | 1446 | WP_003158168.1 | class I SAM-dependent methyltransferase | - |
| DPADHS01_RS34920 () | 5055166..5055327 | + | 162 | Protein_4833 | helicase | - |
| DPADHS01_RS34380 () | 5055353..5055783 | - | 431 | Protein_4834 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DPADHS01_RS23975 () | 5055888..5056571 | + | 684 | WP_003158165.1 | SOS response-associated peptidase family protein | - |
| DPADHS01_RS23980 () | 5057435..5057809 | + | 375 | WP_003158163.1 | hypothetical protein | - |
| DPADHS01_RS35100 () | 5057834..5058418 | + | 585 | WP_044265603.1 | hypothetical protein | - |
| DPADHS01_RS23990 () | 5058403..5058999 | + | 597 | WP_003158161.1 | VWA domain-containing protein | - |
| DPADHS01_RS23995 () | 5059551..5059943 | + | 393 | WP_003158160.1 | hypothetical protein | - |
| DPADHS01_RS34400 () | 5059962..5060285 | + | 324 | WP_003158159.1 | hypothetical protein | - |
| DPADHS01_RS24000 () | 5061112..5061384 | - | 273 | WP_023464341.1 | hypothetical protein | - |
| DPADHS01_RS24005 () | 5061602..5062300 | + | 699 | WP_023094353.1 | hypothetical protein | - |
| DPADHS01_RS24010 () | 5062311..5063066 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| DPADHS01_RS24015 () | 5063051..5063632 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| DPADHS01_RS24020 () | 5063629..5064129 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| DPADHS01_RS24025 () | 5064201..5064407 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| DPADHS01_RS24030 () | 5064411..5066642 | + | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| DPADHS01_RS24035 () | 5066642..5067388 | + | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| DPADHS01_RS24040 () | 5067406..5067897 | + | 492 | WP_003099826.1 | hypothetical protein | - |
| DPADHS01_RS24045 () | 5068139..5069620 | + | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| DPADHS01_RS35105 () | 5069752..5070861 | + | 1110 | WP_003121016.1 | hypothetical protein | - |
| DPADHS01_RS34405 () | 5070907..5071218 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| DPADHS01_RS24055 () | 5071486..5074452 | - | 2967 | WP_011005944.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| DPADHS01_RS24060 () | 5074456..5075016 | - | 561 | WP_014003957.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| DPADHS01_RS24065 () | 5075019..5075483 | - | 465 | WP_016851620.1 | hypothetical protein | - |
| DPADHS01_RS24070 () | 5075924..5076490 | - | 567 | WP_004574805.1 | OsmC family protein | - |
| DPADHS01_RS24075 () | 5076505..5077281 | - | 777 | WP_004574804.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| DPADHS01_RS24080 () | 5077341..5077925 | - | 585 | WP_004574803.1 | Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR | VF |
| DPADHS01_RS34410 () | 5077922..5078602 | - | 681 | WP_004574802.1 | cupin domain-containing protein | - |
| DPADHS01_RS24090 () | 5078741..5079010 | + | 270 | WP_025986390.1 | hypothetical protein | - |
| DPADHS01_RS24095 () | 5079104..5079442 | + | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| DPADHS01_RS24100 () | 5079439..5079678 | + | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| DPADHS01_RS24105 () | 5079696..5080052 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| DPADHS01_RS24110 () | 5080063..5080449 | + | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| DPADHS01_RS24115 () | 5080446..5081105 | + | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| DPADHS01_RS24120 () | 5081102..5081986 | + | 885 | WP_003121020.1 | TIGR03749 family integrating conjugative element protein | - |
| DPADHS01_RS24125 () | 5081970..5083475 | + | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| DPADHS01_RS24130 () | 5083453..5083896 | + | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| DPADHS01_RS24135 () | 5083896..5086838 | + | 2943 | WP_031299041.1 | conjugative transfer ATPase | - |
| DPADHS01_RS24140 () | 5086835..5087119 | + | 285 | WP_003099860.1 | hypothetical protein | - |
| DPADHS01_RS24145 () | 5087116..5087775 | + | 660 | WP_003109405.1 | DsbA family protein | - |
| DPADHS01_RS24150 () | 5087772..5087990 | - | 219 | WP_003109406.1 | hypothetical protein | - |
| DPADHS01_RS24165 () | 5090132..5090563 | + | 432 | WP_003111736.1 | TIGR03757 family integrating conjugative element protein | - |
| DPADHS01_RS24170 () | 5090563..5091501 | + | 939 | WP_016851627.1 | TIGR03756 family integrating conjugative element protein | - |
| DPADHS01_RS24175 () | 5091519..5092901 | + | 1383 | WP_023122674.1 | integrating conjugative element protein | - |
| DPADHS01_RS24180 () | 5092901..5093248 | + | 348 | WP_016851629.1 | hypothetical protein | - |
| DPADHS01_RS24185 () | 5093245..5094759 | + | 1515 | WP_016851630.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| DPADHS01_RS35110 () | 5094785..5095108 | - | 324 | WP_071536355.1 | hypothetical protein | - |
| DPADHS01_RS24190 () | 5095227..5095499 | + | 273 | WP_003111730.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| DPADHS01_RS24195 () | 5095503..5095856 | + | 354 | WP_003111729.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DPADHS01_RS24200 () | 5095883..5096797 | - | 915 | WP_003119431.1 | hypothetical protein | - |
| DPADHS01_RS34415 () | 5096823..5097062 | - | 240 | WP_010792230.1 | hypothetical protein | - |
| DPADHS01_RS24215 () | 5098745..5100664 | + | 1920 | WP_016852953.1 | helicase/relaxase domain-containing protein | - |
| DPADHS01_RS24220 () | 5100661..5101941 | + | 1281 | WP_016852952.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| DPADHS01_RS24230 () | 5102447..5103121 | - | 675 | WP_003111415.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| DPADHS01_RS24235 () | 5103137..5103784 | - | 648 | WP_003112571.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| DPADHS01_RS24240 () | 5104004..5104828 | - | 825 | WP_003120698.1 | tol-pal system protein YbgF | - |
| DPADHS01_RS24245 () | 5104838..5105344 | - | 507 | WP_003111417.1 | peptidoglycan-associated lipoprotein Pal | - |
| DPADHS01_RS24250 () | 5105397..5106695 | - | 1299 | WP_003086128.1 | Tol-Pal system protein TolB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|