MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 68882 bp
Accession: NZ_CP013978 Location: 1..68882 Organism: Piscirickettsia salmonis strain CGR02 Replicon: plasmid pPSCRG02-4
Accession: NZ_CP013978 Location: 1..68882 Organism: Piscirickettsia salmonis strain CGR02 Replicon: plasmid pPSCRG02-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWJ11_RS16835 () | 336..1079 | + | 744 | WP_027242550.1 | complement resistance protein TraT | - |
| AWJ11_RS16840 () | 1118..1438 | + | 321 | WP_027242549.1 | hypothetical protein | - |
| AWJ11_RS16845 () | 1449..3446 | + | 1998 | WP_052106227.1 | type IV conjugative transfer system coupling protein TraD | - |
| AWJ11_RS16850 () | 3446..4198 | + | 753 | WP_027242548.1 | DsbA family protein | - |
| AWJ11_RS16855 () | 4210..4416 | + | 207 | WP_027242547.1 | hypothetical protein | - |
| AWJ11_RS16860 () | 4485..10355 | + | 5871 | WP_075275450.1 | Multifunctional conjugation protein TraI | Relaxase |
| AWJ11_RS16865 () | 10350..10679 | - | 330 | WP_036774904.1 | hypothetical protein | - |
| AWJ11_RS16870 () | 10670..11113 | - | 444 | WP_036774901.1 | hypothetical protein | - |
| AWJ11_RS16875 () | 11699..11992 | + | 294 | WP_036774899.1 | hypothetical protein | - |
| AWJ11_RS16880 () | 12056..12844 | - | 789 | WP_047927050.1 | hypothetical protein | - |
| AWJ11_RS16885 () | 12904..13467 | - | 564 | WP_036816706.1 | DnaJ domain-containing protein | - |
| AWJ11_RS16890 () | 13536..13907 | - | 372 | WP_047927049.1 | hypothetical protein | - |
| AWJ11_RS16895 () | 14334..14588 | + | 255 | WP_144420829.1 | hypothetical protein | - |
| AWJ11_RS16900 () | 14765..16951 | + | 2187 | WP_027242581.1 | ATP-dependent RecD-like DNA helicase | - |
| AWJ11_RS16905 () | 16961..17362 | - | 402 | WP_027242582.1 | helix-turn-helix domain-containing protein | - |
| AWJ11_RS16910 () | 17359..17670 | - | 312 | WP_027242583.1 | type II toxin-antitoxin system HigB family toxin | - |
| AWJ11_RS20025 () | 18027..18341 | - | 315 | WP_036774182.1 | WGR domain-containing protein | - |
| AWJ11_RS16920 () | 18438..20300 | + | 1863 | WP_027242576.1 | RecX family transcriptional regulator | - |
| AWJ11_RS16925 () | 20334..20819 | + | 486 | WP_027242575.1 | hypothetical protein | - |
| AWJ11_RS16930 () | 20830..21057 | - | 228 | Protein_20 | transposase | - |
| AWJ11_RS20030 () | 21053..21205 | + | 153 | WP_155046643.1 | IS30 family transposase IS4351 | Transposase |
| AWJ11_RS16935 () | 21253..22260 | - | 1008 | WP_036774189.1 | IS3 family transposase ISGur10 | Transposase |
| AWJ11_RS20035 () | 22260..22517 | - | 258 | WP_098082828.1 | IS3 family transposase ISGur10 | Transposase |
| AWJ11_RS18780 () | 22750..23667 | + | 918 | Protein_24 | IS30 family transposase IS1655 | Transposase |
| AWJ11_RS16950 () | 23784..24248 | + | 465 | WP_036774631.1 | hypothetical protein | - |
| AWJ11_RS18785 () | 24307..24447 | - | 141 | Protein_26 | helix-turn-helix domain-containing protein | - |
| AWJ11_RS18790 () | 24611..24757 | + | 147 | WP_157894761.1 | transposase zinc-binding domain-containing protein | - |
| AWJ11_RS16960 () | 25474..25614 | - | 141 | Protein_28 | IS30 family transposase ISLga1 | Transposase |
| AWJ11_RS16965 () | 25787..26005 | + | 219 | WP_155046644.1 | hypothetical protein | - |
| AWJ11_RS16970 () | 26331..26603 | - | 273 | WP_016211910.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| AWJ11_RS16975 () | 26607..26867 | - | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AWJ11_RS16980 () | 27140..27730 | + | 591 | WP_027242600.1 | site-specific integrase | - |
| AWJ11_RS18795 () | 27758..29161 | - | 1404 | WP_048876031.1 | IS4 family transposase ISArch10 | Transposase |
| AWJ11_RS18800 () | 29865..30710 | - | 846 | Protein_34 | IS982 family transposase | - |
| AWJ11_RS17005 () | 31257..32381 | - | 1125 | WP_047927063.1 | hypothetical protein | - |
| AWJ11_RS17010 () | 32381..32707 | - | 327 | WP_047927062.1 | hypothetical protein | - |
| AWJ11_RS17015 () | 33236..33445 | + | 210 | WP_047927061.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| AWJ11_RS17020 () | 33435..34295 | + | 861 | WP_047927060.1 | ParA family protein | - |
| AWJ11_RS17025 () | 34292..35140 | + | 849 | WP_036774869.1 | ParB/RepB/Spo0J family partition protein | - |
| AWJ11_RS17030 () | 35584..36879 | + | 1296 | WP_027242605.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| AWJ11_RS17035 () | 37174..37914 | + | 741 | WP_036775038.1 | ester cyclase | - |
| AWJ11_RS17040 () | 37900..38571 | - | 672 | WP_036775037.1 | HAD family hydrolase | - |
| AWJ11_RS17045 () | 38577..39362 | - | 786 | WP_053063426.1 | class I SAM-dependent methyltransferase | - |
| AWJ11_RS17050 () | 39482..39838 | - | 357 | WP_047927058.1 | hypothetical protein | - |
| AWJ11_RS17055 () | 39917..40195 | + | 279 | WP_036774994.1 | hypothetical protein | - |
| AWJ11_RS17060 () | 40401..40655 | + | 255 | WP_144420828.1 | hypothetical protein | - |
| AWJ11_RS17065 () | 40853..41170 | + | 318 | WP_052106244.1 | hypothetical protein | - |
| AWJ11_RS17070 () | 41186..41476 | + | 291 | WP_036775000.1 | type IV conjugative transfer system protein TraL | - |
| AWJ11_RS18805 () | 41657..43060 | + | 1404 | WP_048876012.1 | IS4 family transposase ISArch10 | Transposase |
| AWJ11_RS17080 () | 43093..43602 | + | 510 | WP_062365791.1 | hypothetical protein | - |
| AWJ11_RS17085 () | 43595..44299 | + | 705 | WP_051929536.1 | type-F conjugative transfer system secretin TraK | - |
| AWJ11_RS17090 () | 44309..45778 | + | 1470 | WP_051929537.1 | TraB/VirB10 family protein | - |
| AWJ11_RS18810 () | 45781..46227 | + | 447 | WP_065653727.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AWJ11_RS17100 () | 46240..48819 | + | 2580 | WP_036774456.1 | type IV secretion system protein TraC | - |
| AWJ11_RS17105 () | 48806..49153 | + | 348 | WP_036774457.1 | TrbI F-type domain-containing protein | - |
| AWJ11_RS17110 () | 49146..49763 | + | 618 | WP_036773375.1 | type-F conjugative transfer system protein TraW | - |
| AWJ11_RS17115 () | 49868..50857 | + | 990 | WP_036773373.1 | conjugal transfer pilus assembly protein TraU | - |
| AWJ11_RS17120 () | 50866..51531 | + | 666 | WP_036773372.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AWJ11_RS17125 () | 51537..53435 | + | 1899 | WP_036773369.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AWJ11_RS17130 () | 53432..54244 | + | 813 | WP_036773367.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AWJ11_RS17135 () | 54241..54732 | + | 492 | WP_027242554.1 | conjugal transfer protein TraF | - |
| AWJ11_RS17140 () | 54725..56107 | + | 1383 | WP_027242553.1 | conjugal transfer protein TraH | - |
| AWJ11_RS17145 () | 56109..58898 | + | 2790 | WP_027242552.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| AWJ11_RS17150 () | 58915..59232 | - | 318 | WP_027242551.1 | hypothetical protein | - |
| AWJ11_RS17155 () | 59315..60058 | + | 744 | WP_027242550.1 | complement resistance protein TraT | - |
| AWJ11_RS17160 () | 60097..60417 | + | 321 | WP_027242549.1 | hypothetical protein | - |
| AWJ11_RS17165 () | 60428..62425 | + | 1998 | WP_052106227.1 | type IV conjugative transfer system coupling protein TraD | - |
| AWJ11_RS17170 () | 62425..63177 | + | 753 | WP_027242548.1 | DsbA family protein | - |
| AWJ11_RS17175 () | 63189..63395 | + | 207 | WP_027242547.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|