MGE detailed information
MGE type: Genomic_island MGE length: 20029 bp
Accession: NZ_CP013952 Location: 1343924..1363952 Organism: Escherichia coli strain HST04 Replicon: chromosome
Accession: NZ_CP013952 Location: 1343924..1363952 Organism: Escherichia coli strain HST04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWH44_RS07010 () | 1339403..1339906 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| AWH44_RS07015 () | 1339919..1340449 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| AWH44_RS07020 () | 1340459..1343095 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| AWH44_RS07025 () | 1343162..1343887 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| AWH44_RS07030 () | 1343924..1344463 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| AWH44_RS07035 () | 1344528..1345076 | - | 549 | WP_000695564.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| AWH44_RS07045 () | 1345558..1346172 | - | 615 | WP_038404959.1 | Tyrosine recombinase XerC | VF |
| AWH44_RS07050 () | 1346165..1346862 | - | 698 | Protein_1282 | IS1 family transposase IS1A | Transposase |
| AWH44_RS07060 () | 1347408..1348010 | - | 603 | WP_000790589.1 | Endoribonuclease toxin MazF | VF |
| AWH44_RS07075 () | 1349466..1350182 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| AWH44_RS07080 () | 1350202..1351308 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| AWH44_RS07085 () | 1351373..1352353 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| AWH44_RS07095 () | 1352936..1354176 | - | 1241 | Protein_1287 | helicase YjhR | - |
| AWH44_RS23740 () | 1354292..1354537 | + | 246 | Protein_1288 | GNAT family N-acetyltransferase | - |
| AWH44_RS07115 () | 1354914..1355171 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| AWH44_RS07120 () | 1355183..1355728 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| AWH44_RS07125 () | 1355784..1356530 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| AWH44_RS07130 () | 1356699..1356917 | + | 219 | Protein_1292 | hypothetical protein | - |
| AWH44_RS24180 () | 1356955..1357071 | + | 117 | Protein_1293 | VOC family protein | - |
| AWH44_RS07140 () | 1357316..1358437 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| AWH44_RS07145 () | 1358434..1358712 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| AWH44_RS07150 () | 1358724..1360037 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| AWH44_RS07155 () | 1360050..1360856 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| AWH44_RS07160 () | 1360987..1361418 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| AWH44_RS07165 () | 1361430..1362062 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| AWH44_RS07170 () | 1362079..1362861 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| AWH44_RS07175 () | 1363164..1363952 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| AWH44_RS07180 () | 1363957..1364862 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| AWH44_RS07185 () | 1364873..1366840 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| AWH44_RS07190 () | 1366947..1368296 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|