MGE detailed information
MGE type: IScluster/Tn MGE length: 17006 bp
Accession: NZ_CP013946 Location: 133444..150449 Organism: Piscirickettsia salmonis strain PSCGR01 Replicon: plasmid pPsCRG01-1
Accession: NZ_CP013946 Location: 133444..150449 Organism: Piscirickettsia salmonis strain PSCGR01 Replicon: plasmid pPsCRG01-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWE47_RS19195 () | 128616..128894 | - | 279 | WP_174872555.1 | transposase | - |
| AWE47_RS16780 () | 128863..129045 | - | 183 | Protein_165 | transposase | - |
| AWE47_RS16785 () | 129322..129570 | + | 249 | Protein_166 | DDE-type integrase/transposase/recombinase | - |
| AWE47_RS16790 () | 129668..131551 | - | 1884 | WP_144420843.1 | DUF1561 family protein | - |
| AWE47_RS21200 () | 131550..131702 | + | 153 | WP_169834791.1 | hypothetical protein | - |
| AWE47_RS16800 () | 132292..133269 | + | 978 | WP_036771347.1 | IS5 family transposase | - |
| AWE47_RS19200 () | 133444..133707 | + | 264 | Protein_170 | IS6 family transposase ISPsa2 | Transposase |
| AWE47_RS16810 () | 134072..134287 | + | 216 | Protein_171 | IS6 family transposase ISPsa2 | Transposase |
| AWE47_RS16815 () | 134290..135018 | - | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| AWE47_RS16820 () | 135307..135996 | + | 690 | WP_017375909.1 | hypothetical protein | - |
| AWE47_RS16825 () | 136044..136859 | + | 816 | WP_036775032.1 | hypothetical protein | - |
| AWE47_RS19205 () | 136943..137149 | + | 207 | Protein_175 | IS6 family transposase ISPsa2 | Transposase |
| AWE47_RS20490 () | 137200..137367 | - | 168 | Protein_176 | IS6 family transposase ISPsa2 | Transposase |
| AWE47_RS16835 () | 137437..138069 | + | 633 | Protein_177 | IS6 family transposase ISPsa2 | Transposase |
| AWE47_RS16840 () | 138135..138701 | - | 567 | Protein_178 | IS6 family transposase ISPsa2 | Transposase |
| AWE47_RS20495 () | 138987..139151 | - | 165 | Protein_179 | IS6 family transposase ISPsa2 | Transposase |
| AWE47_RS16850 () | 139491..139751 | + | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AWE47_RS16855 () | 139755..140027 | + | 273 | WP_036772441.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| AWE47_RS16860 () | 140103..140831 | + | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| AWE47_RS16865 () | 141400..142464 | - | 1065 | WP_174872554.1 | IS91 family transposase ISVsa9 | Transposase |
| AWE47_RS21205 () | 142644..142823 | - | 180 | WP_157894752.1 | hypothetical protein | - |
| AWE47_RS16875 () | 143236..144063 | + | 828 | WP_048876208.1 | IS30 family transposase ISPlu1 | Transposase |
| AWE47_RS16880 () | 144106..144835 | - | 730 | Protein_186 | IS6 family transposase ISPsa2 | Transposase |
| AWE47_RS16885 () | 144917..145387 | - | 471 | WP_036771289.1 | hypothetical protein | - |
| AWE47_RS20500 () | 146037..146213 | - | 177 | Protein_188 | IS30 family transposase ISAs2 | Transposase |
| AWE47_RS20505 () | 146281..146424 | - | 144 | WP_155046633.1 | IS6 family transposase ISPsa2 | Transposase |
| AWE47_RS16890 () | 146686..147297 | - | 612 | Protein_190 | IS6 family transposase ISPsa2 | Transposase |
| AWE47_RS16895 () | 147631..148167 | - | 537 | WP_075275480.1 | DUF1353 domain-containing protein | - |
| AWE47_RS21210 () | 148205..148372 | + | 168 | WP_169834792.1 | hypothetical protein | - |
| AWE47_RS16900 () | 148584..149360 | - | 777 | WP_017375850.1 | N-acetylmuramoyl-L-alanine amidase | - |
| AWE47_RS16905 () | 149721..150449 | + | 729 | WP_036771279.1 | IS6 family transposase ISPsa2 | Transposase |
| AWE47_RS19220 () | 150519..150719 | + | 201 | WP_155046634.1 | transposase zinc-binding domain-containing protein | - |
| AWE47_RS16910 () | 150638..151609 | + | 972 | WP_048876229.1 | IS91 family transposase | - |
| AWE47_RS16915 () | 152023..152391 | + | 369 | WP_027242938.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AWE47_RS16920 () | 152393..152701 | + | 309 | WP_017375972.1 | helix-turn-helix domain-containing protein | - |
| AWE47_RS16930 () | 153146..153355 | + | 210 | WP_017375841.1 | hypothetical protein | - |
| AWE47_RS16935 () | 153662..153880 | + | 219 | WP_027242937.1 | hypothetical protein | - |
| AWE47_RS16940 () | 153877..154329 | + | 453 | WP_027242936.1 | hypothetical protein | - |
| AWE47_RS16945 () | 154457..154687 | + | 231 | WP_144420845.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|