MGE detailed information
MGE type: Genomic_island MGE length: 60396 bp
Accession: NZ_CP013940 Location: 3168977..3229372 Organism: Cronobacter malonaticus LMG 23826 Replicon: chromosome
Accession: NZ_CP013940 Location: 3168977..3229372 Organism: Cronobacter malonaticus LMG 23826 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AFK66_RS14860 () | 3164843..3165430 | - | 588 | WP_007781068.1 | TetR/AcrR family transcriptional regulator | - |
| AFK66_RS14865 () | 3165573..3165977 | + | 405 | WP_007699216.1 | RidA family protein | - |
| AFK66_RS14870 () | 3166024..3167034 | - | 1011 | WP_023899298.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| AFK66_RS14875 () | 3167113..3168093 | - | 981 | WP_007781065.1 | helix-turn-helix domain-containing protein | - |
| AFK66_RS14880 () | 3168324..3168620 | - | 297 | WP_004386323.1 | hypothetical protein | - |
| AFK66_RS14885 () | 3168732..3168926 | + | 195 | WP_007781062.1 | hypothetical protein | - |
| AFK66_RS14890 () | 3168977..3169423 | - | 447 | WP_032967933.1 | DUF943 family protein | - |
| AFK66_RS14895 () | 3169416..3170219 | - | 804 | WP_032967931.1 | DUF3289 family protein | - |
| AFK66_RS22770 () | 3170690..3170851 | + | 162 | WP_007781059.1 | hypothetical protein | - |
| AFK66_RS14900 () | 3170826..3171098 | + | 273 | WP_032968682.1 | hypothetical protein | - |
| AFK66_RS14905 () | 3171235..3172293 | + | 1059 | WP_032983603.1 | dipeptidase | - |
| AFK66_RS21585 () | 3172405..3172482 | + | 78 | WP_004387125.1 | pyrroloquinoline quinone precursor peptide PqqA | - |
| AFK66_RS14910 () | 3172540..3173448 | + | 909 | WP_007781049.1 | pyrroloquinoline quinone biosynthesis protein PqqB | - |
| AFK66_RS14915 () | 3173457..3174212 | + | 756 | WP_007781046.1 | pyrroloquinoline-quinone synthase PqqC | - |
| AFK66_RS14920 () | 3174212..3174490 | + | 279 | WP_004387128.1 | pyrroloquinoline quinone biosynthesis peptide chaperone PqqD | - |
| AFK66_RS14925 () | 3174483..3175619 | + | 1137 | WP_023899304.1 | pyrroloquinoline quinone biosynthesis protein PqqE | - |
| AFK66_RS14930 () | 3175616..3177763 | + | 2148 | WP_023899305.1 | pyrroloquinoline quinone biosynthesis protein PqqF | - |
| AFK66_RS14935 () | 3177989..3178909 | + | 921 | WP_023899306.1 | peptidoglycan-binding protein | - |
| AFK66_RS21590 () | 3179029..3179337 | + | 309 | WP_080630089.1 | DUF1311 domain-containing protein | - |
| AFK66_RS14945 () | 3179394..3179855 | + | 462 | WP_023899308.1 | DUF3828 domain-containing protein | - |
| AFK66_RS14950 () | 3179889..3181484 | - | 1596 | WP_007777959.1 | ABC transporter substrate-binding protein | - |
| AFK66_RS14955 () | 3181602..3182831 | + | 1230 | WP_007777961.1 | peptidase T | - |
| AFK66_RS14960 () | 3182842..3183123 | - | 282 | WP_007777964.1 | hypothetical protein | - |
| AFK66_RS14965 () | 3183225..3183449 | - | 225 | WP_032969018.1 | hypothetical protein | - |
| AFK66_RS21595 () | 3183670..3183882 | - | 213 | WP_071603059.1 | DUF1493 family protein | - |
| AFK66_RS14970 () | 3184017..3184955 | + | 939 | WP_007777971.1 | hypothetical protein | - |
| AFK66_RS14975 () | 3184952..3185395 | + | 444 | WP_014729520.1 | DUF1311 domain-containing protein | - |
| AFK66_RS14980 () | 3185439..3185900 | + | 462 | WP_007777976.1 | DUF1311 domain-containing protein | - |
| AFK66_RS14985 () | 3185967..3186377 | + | 411 | WP_023899314.1 | DUF1311 domain-containing protein | - |
| AFK66_RS14990 () | 3186849..3188294 | + | 1446 | WP_007780460.1 | SIR2 family protein | - |
| AFK66_RS21600 () | 3188304..3188804 | + | 501 | WP_071603060.1 | TIR domain-containing protein | - |
| AFK66_RS15000 () | 3189280..3190599 | + | 1320 | WP_007780382.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| AFK66_RS15005 () | 3191480..3192244 | + | 765 | WP_016246899.1 | hypothetical protein | - |
| AFK66_RS21615 () | 3192706..3193326 | + | 621 | WP_071601457.1 | inovirus Gp2 family protein | - |
| AFK66_RS22440 () | 3193382..3193692 | - | 311 | Protein_3002 | IS66 family insertion sequence element accessory protein TnpB | - |
| AFK66_RS22050 () | 3193693..3194345 | - | 653 | Protein_3003 | transposase | - |
| AFK66_RS15020 () | 3194419..3195435 | - | 1017 | Protein_3004 | IS256 family transposase IS1414 | Transposase |
| AFK66_RS22445 () | 3195653..3195817 | - | 165 | Protein_3005 | transposase domain-containing protein | - |
| AFK66_RS22450 () | 3195762..3196025 | - | 264 | WP_071601456.1 | IS66 family transposase ISPpu19 | Transposase |
| AFK66_RS22455 () | 3196040..3196303 | + | 264 | WP_001295708.1 | hypothetical protein | - |
| AFK66_RS22060 () | 3196532..3196708 | + | 177 | WP_080601204.1 | helix-turn-helix domain-containing protein | - |
| AFK66_RS15040 () | 3196848..3197417 | + | 570 | WP_007780320.1 | Small heat shock protein IbpA | VF |
| AFK66_RS15045 () | 3197523..3200372 | + | 2850 | WP_032986565.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | VF |
| AFK66_RS15050 () | 3200372..3200559 | + | 188 | Protein_3011 | hypothetical protein | - |
| AFK66_RS15055 () | 3200620..3202437 | + | 1818 | WP_032986562.1 | ATP-dependent zinc metalloprotease FtsH | - |
| AFK66_RS15060 () | 3202525..3202983 | + | 459 | WP_001275372.1 | hypothetical protein | VF |
| AFK66_RS15065 () | 3203006..3203920 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| AFK66_RS15070 () | 3204022..3204909 | + | 888 | WP_007791120.1 | heat resistance protein YfdX2 | - |
| AFK66_RS15075 () | 3204999..3205610 | + | 612 | WP_001090779.1 | heat resistance membrane protein HdeD-GI | - |
| AFK66_RS15080 () | 3205690..3206835 | + | 1146 | WP_007780005.1 | hypothetical protein | - |
| AFK66_RS15085 () | 3206825..3207265 | + | 441 | WP_029039045.1 | heat resistance system thioredoxin Trx-GI | - |
| AFK66_RS15090 () | 3207269..3208978 | + | 1710 | WP_023899359.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| AFK66_RS15095 () | 3208981..3209478 | + | 498 | WP_032967912.1 | heat resistance protein PsiE-GI | - |
| AFK66_RS15100 () | 3209456..3210421 | + | 966 | WP_007779958.1 | M48 family metalloprotease | - |
| AFK66_RS15105 () | 3210446..3211597 | + | 1152 | WP_023899362.1 | hypothetical protein | VF |
| AFK66_RS15110 () | 3211822..3212802 | - | 981 | WP_007777755.1 | IS5 family transposase ISPa16 | Transposase |
| AFK66_RS15125 () | 3214181..3214555 | + | 375 | Protein_3025 | 50S ribosome-binding GTPase | - |
| AFK66_RS21645 () | 3214587..3214826 | + | 240 | WP_029039036.1 | DUF905 domain-containing protein | - |
| AFK66_RS15130 () | 3214928..3215386 | + | 459 | WP_023899364.1 | antirestriction protein | - |
| AFK66_RS15135 () | 3215402..3215878 | + | 477 | WP_029039034.1 | RadC family protein | - |
| AFK66_RS21650 () | 3215887..3216108 | + | 222 | WP_007777714.1 | DUF987 domain-containing protein | - |
| AFK66_RS15140 () | 3216129..3216446 | + | 318 | WP_007777712.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| AFK66_RS15145 () | 3216467..3216808 | + | 342 | WP_007777710.1 | TA system toxin CbtA family protein | Toxin Detail |
| AFK66_RS15150 () | 3217540..3218793 | - | 1254 | WP_007777708.1 | hypothetical protein | - |
| AFK66_RS15155 () | 3219160..3219624 | - | 465 | WP_032968632.1 | helix-turn-helix domain-containing protein | - |
| AFK66_RS15160 () | 3219864..3220361 | + | 498 | WP_032967861.1 | hypothetical protein | - |
| AFK66_RS15165 () | 3220402..3222996 | - | 2595 | WP_007777705.1 | AAA family ATPase | - |
| AFK66_RS15170 () | 3223441..3223797 | - | 357 | Protein_3036 | recombinase family protein | - |
| AFK66_RS15175 () | 3223930..3224472 | + | 543 | WP_007777701.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| AFK66_RS21655 () | 3224693..3225175 | + | 483 | WP_071603061.1 | ribbon-helix-helix domain-containing protein | - |
| AFK66_RS15185 () | 3225186..3225515 | + | 330 | WP_032967860.1 | hypothetical protein | - |
| AFK66_RS15190 () | 3225526..3226452 | + | 927 | WP_007777699.1 | hypothetical protein | - |
| AFK66_RS15195 () | 3226977..3227309 | + | 333 | WP_032967859.1 | NIPSNAP family protein | - |
| AFK66_RS15200 () | 3227432..3229372 | - | 1941 | WP_007777695.1 | hypothetical protein ; Integrase | Integrase |
| AFK66_RS15210 () | 3229644..3230897 | - | 1254 | WP_023899367.1 | glutamate-5-semialdehyde dehydrogenase | - |
| AFK66_RS15215 () | 3230908..3232011 | - | 1104 | WP_004385346.1 | glutamate 5-kinase | - |
| AFK66_RS15220 () | 3232303..3233385 | + | 1083 | WP_032968628.1 | phosphoporin PhoE | - |
| AFK66_RS15225 () | 3233505..3233894 | - | 390 | WP_007777688.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|