MGE detailed information
MGE type: Prophage MGE length: 39437 bp
Accession: NZ_CP013831 Location: 535827..575263 Organism: Escherichia coli strain CD306 Replicon: chromosome
Accession: NZ_CP013831 Location: 535827..575263 Organism: Escherichia coli strain CD306 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVR67_RS02490 () | 531313..532965 | + | 1653 | WP_000771748.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase | - |
| AVR67_RS02495 () | 533003..533506 | - | 504 | WP_000667000.1 | hypothetical protein | - |
| AVR67_RS02500 () | 533503..534303 | - | 801 | WP_000439798.1 | hypothetical protein | - |
| AVR67_RS02505 () | 534327..534805 | - | 479 | Protein_493 | Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK | - |
| AVR67_RS02510 () | 535009..535800 | - | 792 | Protein_494 | TraB/GumN family protein | - |
| AVR67_RS02515 () | 535827..536399 | - | 573 | WP_000904922.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| AVR67_RS02520 () | 536501..536974 | + | 474 | WP_024189672.1 | phage tail protein | - |
| AVR67_RS02525 () | 537015..537497 | + | 483 | WP_059217998.1 | phage tail protein | - |
| AVR67_RS02530 () | 537497..538111 | + | 615 | WP_001529037.1 | tail assembly chaperone | - |
| AVR67_RS28255 () | 538118..540310 | - | 2193 | WP_077872211.1 | tail fiber protein | - |
| AVR67_RS02545 () | 540313..540891 | - | 579 | WP_000138756.1 | phage tail protein I | - |
| AVR67_RS02550 () | 540884..541987 | - | 1104 | WP_001529034.1 | baseplate J/gp47 family protein | - |
| AVR67_RS02555 () | 541978..542325 | - | 348 | WP_000859116.1 | GPW/gp25 family protein | - |
| AVR67_RS02560 () | 542380..542976 | - | 597 | WP_000148265.1 | phage baseplate assembly protein V | - |
| AVR67_RS02565 () | 542973..544145 | - | 1173 | WP_001529032.1 | phage late control D family protein | - |
| AVR67_RS02570 () | 544133..544345 | - | 213 | WP_000478224.1 | tail protein X | - |
| AVR67_RS02575 () | 544345..545229 | - | 885 | WP_000458387.1 | phage tail protein | - |
| AVR67_RS02580 () | 545229..548441 | - | 3213 | WP_059217999.1 | phage tail tape measure protein | - |
| AVR67_RS28870 () | 548517..548675 | - | 159 | WP_001202894.1 | GpE family phage tail protein | - |
| AVR67_RS02585 () | 548599..548934 | - | 336 | WP_000084213.1 | phage tail assembly protein | - |
| AVR67_RS02590 () | 549032..549313 | - | 282 | WP_000110114.1 | hypothetical protein | - |
| AVR67_RS02595 () | 549316..549840 | - | 525 | WP_162832341.1 | phage major tail tube protein | - |
| AVR67_RS02600 () | 549837..551264 | - | 1428 | WP_000729834.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| AVR67_RS02605 () | 551254..551505 | - | 252 | WP_000666499.1 | hypothetical protein | - |
| AVR67_RS02610 () | 551505..551969 | - | 465 | WP_001101804.1 | Gp37 family protein | - |
| AVR67_RS02615 () | 551969..552415 | - | 447 | WP_000271668.1 | DUF1320 domain-containing protein | - |
| AVR67_RS02620 () | 552417..552755 | - | 339 | WP_059218000.1 | DUF2190 family protein | - |
| AVR67_RS02625 () | 552765..553718 | - | 954 | WP_001286908.1 | hypothetical protein | - |
| AVR67_RS02630 () | 553733..554848 | - | 1116 | WP_001511580.1 | hypothetical protein | - |
| AVR67_RS02635 () | 555063..555521 | - | 459 | WP_000135514.1 | phage virion morphogenesis protein | - |
| AVR67_RS02640 () | 555524..556345 | - | 822 | WP_000117556.1 | minor capsid protein | - |
| AVR67_RS02645 () | 556326..557822 | - | 1497 | WP_059218001.1 | DUF935 domain-containing protein | - |
| AVR67_RS02650 () | 557822..559345 | - | 1524 | WP_000137893.1 | hypothetical protein | - |
| AVR67_RS02655 () | 559342..559884 | - | 543 | WP_000533684.1 | DUF3486 family protein | - |
| AVR67_RS02660 () | 559887..560198 | - | 312 | WP_000227704.1 | hypothetical protein | - |
| AVR67_RS02665 () | 560198..560524 | - | 327 | WP_000175097.1 | membrane protein | - |
| AVR67_RS02670 () | 560521..561132 | - | 612 | WP_001299256.1 | hypothetical protein | - |
| AVR67_RS02675 () | 561161..561898 | - | 738 | WP_001104438.1 | transglycosylase SLT domain-containing protein | - |
| AVR67_RS02680 () | 561901..562251 | - | 351 | WP_000793145.1 | putative holin | - |
| AVR67_RS02685 () | 562382..563125 | + | 744 | WP_000194949.1 | hypothetical protein | - |
| AVR67_RS02690 () | 563101..563502 | - | 402 | WP_001573938.1 | hypothetical protein | - |
| AVR67_RS02695 () | 563504..563719 | + | 216 | WP_001069609.1 | hypothetical protein | - |
| AVR67_RS02700 () | 563911..564675 | + | 765 | WP_001573937.1 | DNA adenine methylase | - |
| AVR67_RS02705 () | 564792..565130 | - | 339 | WP_000579778.1 | helix-turn-helix domain-containing protein | - |
| AVR67_RS02710 () | 565231..565419 | + | 189 | WP_000123378.1 | DNA-binding protein | - |
| AVR67_RS02715 () | 565472..565780 | + | 309 | WP_000047758.1 | helix-turn-helix domain-containing protein | - |
| AVR67_RS02720 () | 565791..566702 | + | 912 | WP_000533819.1 | hypothetical protein | - |
| AVR67_RS02725 () | 566706..568475 | + | 1770 | WP_059218002.1 | hypothetical protein ; Integrase | Integrase |
| AVR67_RS02730 () | 568486..569652 | + | 1167 | WP_059218003.1 | AAA family ATPase | - |
| AVR67_RS02735 () | 569655..569924 | + | 270 | WP_000843446.1 | hypothetical protein | - |
| AVR67_RS02740 () | 569952..570482 | + | 531 | WP_001381528.1 | host-nuclease inhibitor Gam family protein | - |
| AVR67_RS02750 () | 570771..571043 | + | 273 | WP_042203510.1 | hypothetical protein | - |
| AVR67_RS02755 () | 571053..571358 | + | 306 | WP_000197789.1 | hypothetical protein | - |
| AVR67_RS02760 () | 571355..572038 | + | 684 | WP_000131939.1 | DUF2786 domain-containing protein | - |
| AVR67_RS02765 () | 572035..572265 | + | 231 | WP_000631814.1 | hypothetical protein | - |
| AVR67_RS02770 () | 572255..572470 | + | 216 | WP_000123379.1 | hypothetical protein | - |
| AVR67_RS02775 () | 572463..572912 | + | 450 | WP_001573929.1 | regulatory protein GemA | - |
| AVR67_RS02780 () | 572884..573282 | + | 399 | WP_001281696.1 | DNA-binding protein | - |
| AVR67_RS02785 () | 573397..574029 | + | 633 | WP_001571573.1 | hypothetical protein | - |
| AVR67_RS29430 () | 574033..574194 | - | 162 | WP_001571575.1 | hypothetical protein | - |
| AVR67_RS02790 () | 574584..574886 | + | 303 | WP_000057523.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AVR67_RS02795 () | 574922..575263 | + | 342 | WP_000806442.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| AVR67_RS02800 () | 575321..577825 | - | 2505 | WP_000083947.1 | copper-exporting P-type ATPase CopA | - |
| AVR67_RS02805 () | 578087..579019 | + | 933 | WP_000883041.1 | glutaminase A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|