MGE detailed information
MGE type: IScluster/Tn MGE length: 30589 bp
Accession: NZ_CP013820 Location: 97499..128087 Organism: Piscirickettsia salmonis strain AY3800B Replicon: plasmid p4PS10
Accession: NZ_CP013820 Location: 97499..128087 Organism: Piscirickettsia salmonis strain AY3800B Replicon: plasmid p4PS10
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVM72_RS17060 () | 92720..93289 | + | 570 | WP_036774378.1 | hypothetical protein | - |
| AVM72_RS17065 () | 93494..93685 | + | 192 | WP_144420833.1 | hypothetical protein | - |
| AVM72_RS17070 () | 93699..94739 | + | 1041 | WP_036774385.1 | DNA-binding protein | - |
| AVM72_RS17075 () | 94806..95135 | + | 330 | WP_027242592.1 | hypothetical protein | - |
| AVM72_RS17080 () | 95171..96121 | + | 951 | WP_027242593.1 | tyrosine-type recombinase/integrase | - |
| AVM72_RS17090 () | 96647..96958 | + | 312 | Protein_121 | helix-turn-helix domain-containing protein | - |
| AVM72_RS17095 () | 96994..97428 | - | 435 | Protein_122 | IS30 family transposase | - |
| AVM72_RS17100 () | 97499..98227 | + | 729 | WP_017377694.1 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS19220 () | 98474..98623 | + | 150 | WP_017375663.1 | IS3 family transposase ISPin3 | Transposase |
| AVM72_RS17105 () | 98635..99363 | - | 729 | WP_017377694.1 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS17110 () | 99393..99722 | - | 330 | WP_048876190.1 | nucleotidyltransferase domain-containing protein | - |
| AVM72_RS17115 () | 99715..100143 | - | 429 | WP_048876191.1 | HI0074 family nucleotidyltransferase substrate-binding subunit | - |
| AVM72_RS17120 () | 100348..100701 | + | 354 | Protein_128 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS17130 () | 100766..101922 | + | 1157 | WP_162038693.1 | IS3 family transposase ISSde6 | Transposase |
| AVM72_RS17135 () | 101926..102315 | + | 390 | Protein_130 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS17140 () | 102655..103146 | + | 492 | WP_155046637.1 | hypothetical protein | - |
| AVM72_RS17145 () | 103228..103956 | + | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS17150 () | 104020..104241 | - | 222 | Protein_133 | IS6 family transposase ISSpu17 | Transposase |
| AVM72_RS21080 () | 104300..104584 | - | 285 | WP_047927778.1 | IS3 family transposase IS1302 | Transposase |
| AVM72_RS17160 () | 104752..106617 | + | 1866 | WP_027243206.1 | RecX family transcriptional regulator | - |
| AVM72_RS19225 () | 106690..106956 | - | 267 | WP_080963664.1 | phage portal protein | - |
| AVM72_RS17165 () | 107137..107478 | - | 342 | WP_080963665.1 | phage portal protein | - |
| AVM72_RS17170 () | 107659..108192 | - | 534 | WP_048876194.1 | phage portal protein | - |
| AVM72_RS19230 () | 108304..108474 | - | 171 | Protein_139 | IS982 family transposase | - |
| AVM72_RS17175 () | 108757..109362 | - | 606 | Protein_140 | IS982 family transposase ISPsa1 | Transposase |
| AVM72_RS17180 () | 109432..110160 | + | 729 | WP_036774350.1 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS17185 () | 110229..110570 | - | 342 | Protein_142 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS17190 () | 110643..111665 | - | 1023 | WP_027243215.1 | hypothetical protein | - |
| AVM72_RS20410 () | 111856..112017 | + | 162 | Protein_144 | IS6 family transposase ISSod8 | Transposase |
| AVM72_RS19235 () | 112053..112952 | - | 900 | Protein_145 | IS30 family transposase ISPlu1 | Transposase |
| AVM72_RS17205 () | 113479..114606 | + | 1128 | WP_036772450.1 | hypothetical protein | - |
| AVM72_RS17210 () | 114686..114949 | + | 264 | Protein_147 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS17215 () | 115338..115769 | + | 432 | Protein_148 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS17220 () | 115772..116338 | - | 567 | Protein_149 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS20415 () | 116624..116788 | - | 165 | Protein_150 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS17230 () | 117128..117388 | + | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AVM72_RS17235 () | 117392..117664 | + | 273 | WP_036772441.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| AVM72_RS17240 () | 117740..118468 | + | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS17245 () | 119038..120102 | - | 1065 | WP_174872554.1 | IS91 family transposase ISVsa9 | Transposase |
| AVM72_RS21085 () | 120282..120461 | - | 180 | WP_157894752.1 | hypothetical protein | - |
| AVM72_RS17255 () | 120874..121701 | + | 828 | WP_048876208.1 | IS30 family transposase ISPlu1 | Transposase |
| AVM72_RS17260 () | 121744..122473 | - | 730 | Protein_157 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS17265 () | 122555..123025 | - | 471 | WP_036771289.1 | hypothetical protein | - |
| AVM72_RS20420 () | 123675..123851 | - | 177 | Protein_159 | IS30 family transposase ISAs2 | Transposase |
| AVM72_RS20425 () | 123919..124062 | - | 144 | WP_155046633.1 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS17270 () | 124324..124935 | - | 612 | Protein_161 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS17275 () | 125269..125805 | - | 537 | WP_075275480.1 | DUF1353 domain-containing protein | - |
| AVM72_RS21090 () | 125843..126010 | + | 168 | WP_169834792.1 | hypothetical protein | - |
| AVM72_RS17280 () | 126222..126998 | - | 777 | WP_017375850.1 | N-acetylmuramoyl-L-alanine amidase | - |
| AVM72_RS17285 () | 127359..128087 | + | 729 | WP_036771279.1 | IS6 family transposase ISPsa2 | Transposase |
| AVM72_RS19255 () | 128157..128357 | + | 201 | WP_155046634.1 | transposase zinc-binding domain-containing protein | - |
| AVM72_RS17290 () | 128276..129247 | + | 972 | WP_048876229.1 | IS91 family transposase | - |
| AVM72_RS17295 () | 129661..130029 | + | 369 | WP_027242938.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AVM72_RS17300 () | 130031..130339 | + | 309 | WP_017375972.1 | helix-turn-helix domain-containing protein | - |
| AVM72_RS17310 () | 130784..130993 | + | 210 | WP_017375841.1 | hypothetical protein | - |
| AVM72_RS17315 () | 131300..131518 | + | 219 | WP_027242937.1 | hypothetical protein | - |
| AVM72_RS17320 () | 131515..131967 | + | 453 | WP_027242936.1 | hypothetical protein | - |
| AVM72_RS17325 () | 132095..132325 | + | 231 | WP_144420845.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|