MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 60078 bp
Accession: NZ_CP013798 Location: 1..60078 Organism: Piscirickettsia salmonis strain AY6532B Replicon: plasmid p2PS9
Accession: NZ_CP013798 Location: 1..60078 Organism: Piscirickettsia salmonis strain AY6532B Replicon: plasmid p2PS9
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI56_RS17515 () | 858..1214 | + | 357 | WP_075286759.1 | ester cyclase | - |
| AVI56_RS17520 () | 1388..1597 | + | 210 | WP_196770426.1 | response regulator transcription factor | - |
| AVI56_RS17525 () | 1645..2253 | - | 609 | WP_196770427.1 | HAD family hydrolase | - |
| AVI56_RS17530 () | 2259..3044 | - | 786 | WP_053063426.1 | class I SAM-dependent methyltransferase | - |
| AVI56_RS17535 () | 3164..3520 | - | 357 | WP_047927058.1 | hypothetical protein | - |
| AVI56_RS17540 () | 3599..3877 | + | 279 | WP_036774994.1 | hypothetical protein | - |
| AVI56_RS17545 () | 4083..4337 | + | 255 | WP_144420828.1 | hypothetical protein | - |
| AVI56_RS17550 () | 4535..4852 | + | 318 | WP_052106244.1 | hypothetical protein | - |
| AVI56_RS17555 () | 4868..5158 | + | 291 | WP_036775000.1 | type IV conjugative transfer system protein TraL | - |
| AVI56_RS17560 () | 5338..6741 | + | 1404 | WP_048876012.1 | IS4 family transposase ISArch10 | Transposase |
| AVI56_RS17565 () | 6774..7283 | + | 510 | WP_062365791.1 | hypothetical protein | - |
| AVI56_RS17570 () | 7276..7980 | + | 705 | WP_051929536.1 | type-F conjugative transfer system secretin TraK | - |
| AVI56_RS17575 () | 7990..9459 | + | 1470 | WP_051929537.1 | TraB/VirB10 family protein | - |
| AVI56_RS17580 () | 9462..9908 | + | 447 | WP_065653727.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AVI56_RS17585 () | 9921..12500 | + | 2580 | WP_036774456.1 | type IV secretion system protein TraC | - |
| AVI56_RS17590 () | 12487..12834 | + | 348 | WP_036774457.1 | TrbI F-type domain-containing protein | - |
| AVI56_RS17595 () | 12827..13444 | + | 618 | WP_036773375.1 | type-F conjugative transfer system protein TraW | - |
| AVI56_RS17600 () | 13549..14538 | + | 990 | WP_036773373.1 | conjugal transfer pilus assembly protein TraU | - |
| AVI56_RS17605 () | 14547..15212 | + | 666 | WP_036773372.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AVI56_RS17610 () | 15218..17023 | + | 1806 | WP_069971679.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AVI56_RS17615 () | 17082..18056 | + | 975 | WP_069971648.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI56_RS17620 () | 18219..19031 | + | 813 | WP_036773367.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AVI56_RS17625 () | 19028..19519 | + | 492 | WP_027242554.1 | conjugal transfer protein TraF | - |
| AVI56_RS17630 () | 19512..20894 | + | 1383 | WP_027242553.1 | conjugal transfer protein TraH | - |
| AVI56_RS17635 () | 20896..23685 | + | 2790 | WP_027242552.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| AVI56_RS17640 () | 23702..24019 | - | 318 | WP_027242551.1 | hypothetical protein | - |
| AVI56_RS17645 () | 24102..24845 | + | 744 | WP_027242550.1 | complement resistance protein TraT | - |
| AVI56_RS17650 () | 25214..25939 | + | 726 | WP_051929530.1 | type IV secretion system DNA-binding domain-containing protein | - |
| AVI56_RS17655 () | 25891..27210 | + | 1320 | WP_051929529.1 | type IV secretion system DNA-binding domain-containing protein | - |
| AVI56_RS17660 () | 27210..27962 | + | 753 | WP_027242548.1 | DsbA family protein | - |
| AVI56_RS17665 () | 27974..28180 | + | 207 | WP_027242547.1 | hypothetical protein | - |
| AVI56_RS17670 () | 28249..34119 | + | 5871 | WP_075275450.1 | Multifunctional conjugation protein TraI | Relaxase |
| AVI56_RS17675 () | 34114..34443 | - | 330 | WP_036774904.1 | hypothetical protein | - |
| AVI56_RS17680 () | 34434..34877 | - | 444 | WP_036774901.1 | hypothetical protein | - |
| AVI56_RS17685 () | 35463..35756 | + | 294 | WP_036774899.1 | hypothetical protein | - |
| AVI56_RS17690 () | 35820..36608 | - | 789 | WP_047927050.1 | hypothetical protein | - |
| AVI56_RS17695 () | 36668..37231 | - | 564 | WP_036816706.1 | DnaJ domain-containing protein | - |
| AVI56_RS17700 () | 37300..37671 | - | 372 | WP_047927049.1 | hypothetical protein | - |
| AVI56_RS17705 () | 38098..38352 | + | 255 | WP_144420829.1 | hypothetical protein | - |
| AVI56_RS17710 () | 38529..40715 | + | 2187 | WP_027242581.1 | ATP-dependent RecD-like DNA helicase | - |
| AVI56_RS17715 () | 40725..41126 | - | 402 | WP_027242582.1 | helix-turn-helix domain-containing protein | - |
| AVI56_RS17720 () | 41123..41434 | - | 312 | WP_027242583.1 | type II toxin-antitoxin system HigB family toxin | - |
| AVI56_RS19855 () | 41791..42105 | - | 315 | WP_036774182.1 | WGR domain-containing protein | - |
| AVI56_RS17730 () | 42202..44064 | + | 1863 | WP_027242576.1 | RecX family transcriptional regulator | - |
| AVI56_RS17735 () | 44196..44582 | + | 387 | WP_075286765.1 | hypothetical protein | - |
| AVI56_RS17740 () | 44593..44820 | - | 228 | Protein_46 | transposase | - |
| AVI56_RS19860 () | 44816..44968 | + | 153 | WP_155046643.1 | IS30 family transposase IS4351 | Transposase |
| AVI56_RS17745 () | 45016..45741 | - | 726 | WP_168183174.1 | IS3 family transposase ISGur10 | Transposase |
| AVI56_RS19865 () | 45849..46022 | - | 174 | WP_155764056.1 | hypothetical protein | - |
| AVI56_RS19870 () | 46022..46279 | - | 258 | WP_098082828.1 | IS3 family transposase ISGur10 | Transposase |
| AVI56_RS17755 () | 46512..47429 | + | 918 | Protein_51 | IS30 family transposase IS1655 | Transposase |
| AVI56_RS17760 () | 47546..48010 | + | 465 | WP_036774631.1 | hypothetical protein | - |
| AVI56_RS17765 () | 48069..48209 | - | 141 | Protein_53 | helix-turn-helix domain-containing protein | - |
| AVI56_RS17770 () | 48373..48519 | + | 147 | WP_157894761.1 | transposase zinc-binding domain-containing protein | - |
| AVI56_RS17775 () | 49236..49376 | - | 141 | Protein_55 | IS30 family transposase ISLga1 | Transposase |
| AVI56_RS17780 () | 49549..49767 | + | 219 | WP_155046644.1 | hypothetical protein | - |
| AVI56_RS17785 () | 50093..50365 | - | 273 | WP_016211910.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| AVI56_RS17790 () | 50369..50629 | - | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AVI56_RS17795 () | 50902..51492 | + | 591 | WP_027242600.1 | site-specific integrase | - |
| AVI56_RS17800 () | 51520..52923 | - | 1404 | WP_048876031.1 | IS4 family transposase ISArch10 | Transposase |
| AVI56_RS18640 () | 53627..54472 | - | 846 | Protein_61 | IS982 family transposase | - |
| AVI56_RS17820 () | 55020..56144 | - | 1125 | WP_047927063.1 | hypothetical protein | - |
| AVI56_RS17825 () | 56144..56470 | - | 327 | WP_047927062.1 | hypothetical protein | - |
| AVI56_RS17830 () | 56999..57208 | + | 210 | WP_047927061.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| AVI56_RS17835 () | 57198..58058 | + | 861 | WP_047927060.1 | ParA family protein | - |
| AVI56_RS17840 () | 58055..58903 | + | 849 | WP_036774869.1 | ParB/RepB/Spo0J family partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|