MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33557 bp
Accession: NZ_CP013794 Location: 1..33557 Organism: Piscirickettsia salmonis strain AY6297B Replicon: plasmid p3PS8
Accession: NZ_CP013794 Location: 1..33557 Organism: Piscirickettsia salmonis strain AY6297B Replicon: plasmid p3PS8
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI55_RS17600 () | 1109..2086 | + | 978 | WP_027242956.1 | Sporulation initiation inhibitor protein Soj | VF |
| AVI55_RS17605 () | 2102..3085 | + | 984 | WP_016211499.1 | ParB/RepB/Spo0J family partition protein | - |
| AVI55_RS19995 () | 3591..3866 | + | 276 | WP_171824216.1 | IS701 family transposase ISAba11 | Transposase |
| AVI55_RS17615 () | 4071..4514 | + | 444 | WP_178099494.1 | IS701 family transposase ISMhu9 | Transposase |
| AVI55_RS17620 () | 4511..5485 | - | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI55_RS20000 () | 5599..5955 | + | 357 | WP_075278739.1 | IS701 family transposase ISMhu9 | Transposase |
| AVI55_RS17630 () | 6021..6611 | - | 591 | WP_016212329.1 | site-specific integrase | - |
| AVI55_RS17635 () | 6842..7102 | + | 261 | WP_027242955.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| AVI55_RS17640 () | 7095..7448 | + | 354 | WP_016211078.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| AVI55_RS17645 () | 7625..8599 | + | 975 | WP_069971681.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI55_RS17650 () | 8708..8935 | + | 228 | Protein_11 | hypothetical protein | - |
| AVI55_RS17655 () | 9132..9497 | + | 366 | WP_027242954.1 | hypothetical protein | - |
| AVI55_RS17660 () | 9642..9896 | + | 255 | WP_027242953.1 | type II toxin-antitoxin system HicA family toxin | - |
| AVI55_RS17665 () | 9889..10236 | + | 348 | WP_027242952.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| AVI55_RS17670 () | 10334..11308 | + | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI55_RS20005 () | 11540..11686 | - | 147 | WP_169834793.1 | hypothetical protein | - |
| AVI55_RS17675 () | 11934..12800 | + | 867 | WP_027242951.1 | hypothetical protein | - |
| AVI55_RS17680 () | 13013..13396 | + | 384 | WP_027242950.1 | HNH endonuclease | - |
| AVI55_RS17685 () | 13483..13965 | + | 483 | WP_027242949.1 | P27 family phage terminase small subunit | - |
| AVI55_RS17690 () | 13968..14153 | + | 186 | WP_027242948.1 | hypothetical protein | - |
| AVI55_RS17695 () | 14173..15147 | - | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI55_RS17700 () | 15244..15636 | + | 393 | WP_075275490.1 | phage major capsid protein | - |
| AVI55_RS17705 () | 15672..16253 | - | 582 | WP_027242946.1 | hypothetical protein | - |
| AVI55_RS20010 () | 16421..16576 | + | 156 | WP_168183246.1 | hypothetical protein | - |
| AVI55_RS17710 () | 16634..17608 | - | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI55_RS17715 () | 17652..17897 | + | 246 | WP_171824220.1 | phage head-tail connector protein | - |
| AVI55_RS17720 () | 18071..18679 | + | 609 | Protein_27 | C40 family peptidase | - |
| AVI55_RS17725 () | 18701..19216 | - | 516 | WP_027242945.1 | hypothetical protein | - |
| AVI55_RS17730 () | 19562..20120 | + | 559 | Protein_29 | tail assembly protein | - |
| AVI55_RS17735 () | 20117..20533 | + | 417 | WP_027242943.1 | hypothetical protein | - |
| AVI55_RS17740 () | 20804..22780 | + | 1977 | WP_048876241.1 | host specificity protein J | - |
| AVI55_RS17745 () | 22925..23980 | + | 1056 | WP_062365785.1 | hypothetical protein | - |
| AVI55_RS17750 () | 23980..24657 | + | 678 | WP_027242942.1 | hypothetical protein | - |
| AVI55_RS17755 () | 24677..25651 | - | 975 | WP_036773116.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI55_RS17760 () | 26136..26513 | + | 378 | WP_048876242.1 | hypothetical protein | - |
| AVI55_RS17765 () | 26525..27178 | + | 654 | WP_027242941.1 | DUF4376 domain-containing protein | - |
| AVI55_RS19295 () | 27178..27339 | + | 162 | WP_155046645.1 | hypothetical protein | - |
| AVI55_RS17770 () | 27359..28333 | - | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI55_RS17775 () | 28419..28715 | + | 297 | Protein_39 | hypothetical protein | - |
| AVI55_RS19300 () | 28724..28864 | + | 141 | WP_144420852.1 | phosphatase | - |
| AVI55_RS17780 () | 29009..29338 | + | 330 | Protein_41 | hypothetical protein | - |
| AVI55_RS17785 () | 29432..30406 | + | 975 | WP_036771332.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI55_RS17790 () | 30449..30631 | + | 183 | WP_036771335.1 | hypothetical protein | - |
| AVI55_RS17795 () | 31024..31875 | + | 852 | WP_051929859.1 | IS982 family transposase ISPsa1 | Transposase |
| AVI55_RS17800 () | 31973..32842 | - | 870 | WP_027242959.1 | hypothetical protein | - |
| AVI55_RS17805 () | 33057..33287 | - | 231 | WP_027242958.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|