MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 60081 bp
Accession: NZ_CP013793 Location: 1..60081 Organism: Piscirickettsia salmonis strain AY6297B Replicon: plasmid p2PS8
Accession: NZ_CP013793 Location: 1..60081 Organism: Piscirickettsia salmonis strain AY6297B Replicon: plasmid p2PS8
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI55_RS17260 () | 141..899 | - | 759 | WP_081377390.1 | ATP-binding domain-containing protein | - |
| AVI55_RS17265 () | 892..1083 | - | 192 | WP_155764139.1 | hypothetical protein | - |
| AVI55_RS17270 () | 1434..1658 | - | 225 | WP_081377392.1 | hypothetical protein | - |
| AVI55_RS19260 () | 1755..2069 | + | 315 | WP_036774182.1 | WGR domain-containing protein | - |
| AVI55_RS17280 () | 2425..2736 | + | 312 | WP_027242583.1 | type II toxin-antitoxin system HigB family toxin | - |
| AVI55_RS17285 () | 2733..3134 | + | 402 | WP_027242582.1 | helix-turn-helix domain-containing protein | - |
| AVI55_RS17290 () | 3144..5330 | - | 2187 | WP_027242581.1 | ATP-dependent RecD-like DNA helicase | - |
| AVI55_RS17295 () | 5507..5761 | - | 255 | WP_144420829.1 | hypothetical protein | - |
| AVI55_RS17300 () | 6188..6559 | + | 372 | WP_047927049.1 | hypothetical protein | - |
| AVI55_RS17305 () | 6628..7191 | + | 564 | WP_036816706.1 | DnaJ domain-containing protein | - |
| AVI55_RS17310 () | 7251..8039 | + | 789 | WP_047927050.1 | hypothetical protein | - |
| AVI55_RS17315 () | 8103..8396 | - | 294 | WP_036774899.1 | hypothetical protein | - |
| AVI55_RS17320 () | 8982..9425 | + | 444 | WP_036774901.1 | hypothetical protein | - |
| AVI55_RS17325 () | 9416..9745 | + | 330 | WP_036774904.1 | hypothetical protein | - |
| AVI55_RS17330 () | 9740..15610 | - | 5871 | WP_075275450.1 | Multifunctional conjugation protein TraI | Relaxase |
| AVI55_RS17335 () | 15679..15885 | - | 207 | WP_027242547.1 | hypothetical protein | - |
| AVI55_RS17340 () | 15897..16649 | - | 753 | WP_027242548.1 | DsbA family protein | - |
| AVI55_RS17345 () | 16649..18646 | - | 1998 | WP_052106227.1 | type IV conjugative transfer system coupling protein TraD | - |
| AVI55_RS17350 () | 18657..18977 | - | 321 | WP_027242549.1 | hypothetical protein | - |
| AVI55_RS17355 () | 19016..19759 | - | 744 | WP_027242550.1 | complement resistance protein TraT | - |
| AVI55_RS17360 () | 19842..20159 | + | 318 | WP_027242551.1 | hypothetical protein | - |
| AVI55_RS17365 () | 20176..22965 | - | 2790 | WP_027242552.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| AVI55_RS17370 () | 22967..24349 | - | 1383 | WP_027242553.1 | conjugal transfer protein TraH | - |
| AVI55_RS17375 () | 24342..24833 | - | 492 | WP_027242554.1 | conjugal transfer protein TraF | - |
| AVI55_RS17380 () | 24830..25642 | - | 813 | WP_036773367.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AVI55_RS17385 () | 25805..26779 | - | 975 | WP_069971648.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI55_RS17390 () | 26838..28643 | - | 1806 | WP_069971679.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AVI55_RS17395 () | 28649..29314 | - | 666 | WP_036773372.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AVI55_RS17400 () | 29323..30312 | - | 990 | WP_036773373.1 | conjugal transfer pilus assembly protein TraU | - |
| AVI55_RS17405 () | 30417..31034 | - | 618 | WP_036773375.1 | type-F conjugative transfer system protein TraW | - |
| AVI55_RS17410 () | 31027..31374 | - | 348 | WP_036774457.1 | TrbI F-type domain-containing protein | - |
| AVI55_RS17415 () | 31361..33940 | - | 2580 | WP_036774456.1 | type IV secretion system protein TraC | - |
| AVI55_RS17420 () | 33953..34399 | - | 447 | WP_065653727.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AVI55_RS17425 () | 34402..35871 | - | 1470 | WP_051929537.1 | TraB/VirB10 family protein | - |
| AVI55_RS17430 () | 35881..36585 | - | 705 | WP_051929536.1 | type-F conjugative transfer system secretin TraK | - |
| AVI55_RS17435 () | 36578..37087 | - | 510 | WP_062365791.1 | hypothetical protein | - |
| AVI55_RS17440 () | 37120..38523 | - | 1404 | WP_048876012.1 | IS4 family transposase ISArch10 | Transposase |
| AVI55_RS17445 () | 38704..38994 | - | 291 | WP_036775000.1 | type IV conjugative transfer system protein TraL | - |
| AVI55_RS17450 () | 39010..39327 | - | 318 | WP_052106244.1 | hypothetical protein | - |
| AVI55_RS17455 () | 39525..39779 | - | 255 | WP_144420828.1 | hypothetical protein | - |
| AVI55_RS17460 () | 39985..40263 | - | 279 | WP_036774994.1 | hypothetical protein | - |
| AVI55_RS17465 () | 40342..40698 | + | 357 | WP_047927058.1 | hypothetical protein | - |
| AVI55_RS17470 () | 40818..41603 | + | 786 | WP_053063426.1 | class I SAM-dependent methyltransferase | - |
| AVI55_RS17475 () | 41609..42280 | + | 672 | WP_036775037.1 | HAD family hydrolase | - |
| AVI55_RS17480 () | 42266..43006 | - | 741 | WP_036775038.1 | ester cyclase | - |
| AVI55_RS17485 () | 43301..44596 | - | 1296 | WP_027242605.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| AVI55_RS17490 () | 45040..45888 | - | 849 | WP_036774869.1 | ParB/RepB/Spo0J family partition protein | - |
| AVI55_RS17495 () | 45885..46745 | - | 861 | WP_047927060.1 | ParA family protein | - |
| AVI55_RS17500 () | 46735..46944 | - | 210 | WP_047927061.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| AVI55_RS17505 () | 47473..47799 | + | 327 | WP_047927062.1 | hypothetical protein | - |
| AVI55_RS17510 () | 47799..48923 | + | 1125 | WP_047927063.1 | hypothetical protein | - |
| AVI55_RS17515 () | 49471..50316 | + | 846 | Protein_52 | IS982 family transposase | - |
| AVI55_RS17525 () | 51020..52423 | + | 1404 | WP_048876031.1 | IS4 family transposase ISArch10 | Transposase |
| AVI55_RS17530 () | 52451..53041 | - | 591 | WP_027242600.1 | site-specific integrase | - |
| AVI55_RS17535 () | 53314..53574 | + | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AVI55_RS17540 () | 53578..53850 | + | 273 | WP_016211910.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| AVI55_RS17545 () | 54176..54394 | - | 219 | WP_155046644.1 | hypothetical protein | - |
| AVI55_RS17550 () | 54567..54707 | + | 141 | Protein_58 | helix-turn-helix domain-containing protein | - |
| AVI55_RS17555 () | 55424..55570 | - | 147 | WP_157894761.1 | transposase zinc-binding domain-containing protein | - |
| AVI55_RS17560 () | 55734..55874 | + | 141 | Protein_60 | helix-turn-helix domain-containing protein | - |
| AVI55_RS17565 () | 55933..56397 | - | 465 | WP_036774631.1 | hypothetical protein | - |
| AVI55_RS17570 () | 56514..57431 | - | 918 | Protein_62 | IS30 family transposase IS1655 | Transposase |
| AVI55_RS19265 () | 57664..57921 | + | 258 | WP_098082828.1 | IS3 family transposase ISGur10 | Transposase |
| AVI55_RS17580 () | 57921..58928 | + | 1008 | WP_036774189.1 | IS3 family transposase ISGur10 | Transposase |
| AVI55_RS19270 () | 58976..59128 | - | 153 | WP_155046643.1 | IS30 family transposase IS4351 | Transposase |
| AVI55_RS17585 () | 59124..59351 | + | 228 | Protein_66 | transposase | - |
| AVI55_RS17590 () | 59362..59853 | - | 492 | WP_155046642.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|