MGE detailed information
MGE type: IScluster/Tn MGE length: 30588 bp
Accession: NZ_CP013792 Location: 97467..128054 Organism: Piscirickettsia salmonis strain AY6297B Replicon: plasmid p1PS8
Accession: NZ_CP013792 Location: 97467..128054 Organism: Piscirickettsia salmonis strain AY6297B Replicon: plasmid p1PS8
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI55_RS16620 () | 92688..93257 | + | 570 | WP_036774378.1 | hypothetical protein | - |
| AVI55_RS16625 () | 93462..93653 | + | 192 | WP_144420833.1 | hypothetical protein | - |
| AVI55_RS16630 () | 93667..94707 | + | 1041 | WP_036774385.1 | DNA-binding protein | - |
| AVI55_RS16635 () | 94774..95103 | + | 330 | WP_027242592.1 | hypothetical protein | - |
| AVI55_RS16640 () | 95139..96089 | + | 951 | WP_027242593.1 | tyrosine-type recombinase/integrase | - |
| AVI55_RS16650 () | 96615..96926 | + | 312 | Protein_124 | helix-turn-helix domain-containing protein | - |
| AVI55_RS16655 () | 96962..97396 | - | 435 | Protein_125 | IS30 family transposase | - |
| AVI55_RS16660 () | 97467..98195 | + | 729 | WP_017377694.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS16665 () | 98442..98591 | + | 150 | WP_017375663.1 | IS3 family transposase ISPin3 | Transposase |
| AVI55_RS16670 () | 98603..99331 | - | 729 | WP_017377694.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS16675 () | 99361..99690 | - | 330 | WP_048876190.1 | nucleotidyltransferase domain-containing protein | - |
| AVI55_RS16680 () | 99683..100111 | - | 429 | WP_048876191.1 | HI0074 family nucleotidyltransferase substrate-binding subunit | - |
| AVI55_RS16685 () | 100316..100669 | + | 354 | Protein_131 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS16690 () | 100734..101890 | + | 1157 | WP_162038693.1 | IS3 family transposase ISSde6 | Transposase |
| AVI55_RS16695 () | 101894..102283 | + | 390 | Protein_133 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS16700 () | 102623..103114 | + | 492 | WP_155046637.1 | hypothetical protein | - |
| AVI55_RS16705 () | 103196..103924 | + | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS16710 () | 103988..104209 | - | 222 | Protein_136 | IS6 family transposase ISSpu17 | Transposase |
| AVI55_RS19970 () | 104268..104552 | - | 285 | WP_047927778.1 | IS3 family transposase IS1302 | Transposase |
| AVI55_RS16720 () | 104720..106585 | + | 1866 | WP_027243206.1 | RecX family transcriptional regulator | - |
| AVI55_RS16725 () | 106658..106924 | - | 267 | WP_080963664.1 | phage portal protein | - |
| AVI55_RS16730 () | 107105..107446 | - | 342 | WP_080963665.1 | phage portal protein | - |
| AVI55_RS16735 () | 107627..108160 | - | 534 | WP_048876194.1 | phage portal protein | - |
| AVI55_RS16740 () | 108272..108442 | - | 171 | Protein_142 | IS982 family transposase | - |
| AVI55_RS16745 () | 108725..109330 | - | 606 | Protein_143 | IS982 family transposase ISPsa1 | Transposase |
| AVI55_RS16750 () | 109400..110128 | + | 729 | WP_036774350.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS16755 () | 110197..110538 | - | 342 | Protein_145 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS16760 () | 110611..111633 | - | 1023 | WP_027243215.1 | hypothetical protein | - |
| AVI55_RS19200 () | 111824..111985 | + | 162 | Protein_147 | IS6 family transposase ISSod8 | Transposase |
| AVI55_RS16770 () | 112021..112920 | - | 900 | Protein_148 | IS30 family transposase ISPlu1 | Transposase |
| AVI55_RS16780 () | 113447..114574 | + | 1128 | WP_036772450.1 | hypothetical protein | - |
| AVI55_RS16785 () | 114654..114917 | + | 264 | Protein_150 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS16790 () | 115306..115737 | + | 432 | Protein_151 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS16795 () | 115740..116306 | - | 567 | Protein_152 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS19205 () | 116592..116756 | - | 165 | Protein_153 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS16800 () | 117096..117356 | + | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AVI55_RS16805 () | 117360..117632 | + | 273 | WP_036772441.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| AVI55_RS16810 () | 117708..118436 | + | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS16815 () | 119005..120069 | - | 1065 | WP_174872554.1 | IS91 family transposase ISVsa9 | Transposase |
| AVI55_RS19975 () | 120249..120428 | - | 180 | WP_157894752.1 | hypothetical protein | - |
| AVI55_RS16830 () | 120841..121668 | + | 828 | WP_048876208.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI55_RS16835 () | 121711..122440 | - | 730 | Protein_160 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS16840 () | 122522..122992 | - | 471 | WP_036771289.1 | hypothetical protein | - |
| AVI55_RS19210 () | 123642..123818 | - | 177 | Protein_162 | IS30 family transposase ISAs2 | Transposase |
| AVI55_RS19215 () | 123886..124029 | - | 144 | WP_155046633.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS16845 () | 124291..124902 | - | 612 | Protein_164 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS16850 () | 125236..125772 | - | 537 | WP_075275480.1 | DUF1353 domain-containing protein | - |
| AVI55_RS19980 () | 125810..125977 | + | 168 | WP_169834792.1 | hypothetical protein | - |
| AVI55_RS16860 () | 126189..126965 | - | 777 | WP_017375850.1 | N-acetylmuramoyl-L-alanine amidase | - |
| AVI55_RS16865 () | 127326..128054 | + | 729 | WP_036771279.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI55_RS16870 () | 128124..128324 | + | 201 | WP_155046634.1 | transposase zinc-binding domain-containing protein | - |
| AVI55_RS16875 () | 128243..129214 | + | 972 | WP_048876229.1 | IS91 family transposase | - |
| AVI55_RS16880 () | 129628..129996 | + | 369 | WP_027242938.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AVI55_RS16885 () | 129998..130306 | + | 309 | WP_017375972.1 | helix-turn-helix domain-containing protein | - |
| AVI55_RS16895 () | 130751..130960 | + | 210 | WP_017375841.1 | hypothetical protein | - |
| AVI55_RS16900 () | 131267..131485 | + | 219 | WP_027242937.1 | hypothetical protein | - |
| AVI55_RS16905 () | 131482..131934 | + | 453 | WP_027242936.1 | hypothetical protein | - |
| AVI55_RS16910 () | 132062..132292 | + | 231 | WP_144420845.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|