MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 33555 bp
Accession: NZ_CP013790 Location: 1..33555 Organism: Piscirickettsia salmonis strain PM58386B Replicon: plasmid p4PS7
Accession: NZ_CP013790 Location: 1..33555 Organism: Piscirickettsia salmonis strain PM58386B Replicon: plasmid p4PS7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI54_RS20565 () | 779..934 | - | 156 | WP_168183246.1 | hypothetical protein | - |
| AVI54_RS18015 () | 1102..1683 | + | 582 | WP_027242946.1 | hypothetical protein | - |
| AVI54_RS18020 () | 1719..2111 | - | 393 | WP_075275490.1 | phage major capsid protein | - |
| AVI54_RS18025 () | 2208..3182 | + | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI54_RS18030 () | 3202..3387 | - | 186 | WP_027242948.1 | hypothetical protein | - |
| AVI54_RS18035 () | 3390..3872 | - | 483 | WP_027242949.1 | P27 family phage terminase small subunit | - |
| AVI54_RS18040 () | 3959..4342 | - | 384 | WP_027242950.1 | HNH endonuclease | - |
| AVI54_RS18045 () | 4555..5421 | - | 867 | WP_027242951.1 | hypothetical protein | - |
| AVI54_RS20570 () | 5675..5815 | + | 141 | WP_162039123.1 | hypothetical protein | - |
| AVI54_RS18050 () | 6047..7021 | - | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI54_RS18055 () | 7119..7466 | - | 348 | WP_027242952.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| AVI54_RS18060 () | 7459..7713 | - | 255 | WP_027242953.1 | type II toxin-antitoxin system HicA family toxin | - |
| AVI54_RS18065 () | 7858..8223 | - | 366 | WP_027242954.1 | hypothetical protein | - |
| AVI54_RS18070 () | 8420..8647 | - | 228 | Protein_14 | hypothetical protein | - |
| AVI54_RS18075 () | 8756..9730 | - | 975 | WP_069971681.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI54_RS18080 () | 9907..10260 | - | 354 | WP_016211078.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| AVI54_RS18085 () | 10253..10513 | - | 261 | WP_027242955.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| AVI54_RS18090 () | 10744..11334 | + | 591 | WP_016212329.1 | site-specific integrase | - |
| AVI54_RS18095 () | 11400..11756 | - | 357 | WP_075278739.1 | IS701 family transposase ISMhu9 | Transposase |
| AVI54_RS18100 () | 11870..12844 | + | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI54_RS18105 () | 12841..13284 | - | 444 | WP_178099494.1 | IS701 family transposase ISMhu9 | Transposase |
| AVI54_RS20575 () | 13489..13764 | - | 276 | WP_171824216.1 | IS701 family transposase ISAba11 | Transposase |
| AVI54_RS18115 () | 14270..15253 | - | 984 | WP_016211499.1 | ParB/RepB/Spo0J family partition protein | - |
| AVI54_RS18120 () | 15269..16246 | - | 978 | WP_027242956.1 | Sporulation initiation inhibitor protein Soj | VF |
| AVI54_RS18125 () | 16476..17525 | + | 1050 | WP_027242957.1 | hypothetical protein | - |
| AVI54_RS18130 () | 17624..17854 | + | 231 | WP_027242958.1 | hypothetical protein | - |
| AVI54_RS18135 () | 18069..18938 | + | 870 | WP_027242959.1 | hypothetical protein | - |
| AVI54_RS18140 () | 19036..19887 | - | 852 | WP_051929859.1 | IS982 family transposase ISPsa1 | Transposase |
| AVI54_RS20580 () | 20109..20288 | + | 180 | WP_144420851.1 | hypothetical protein | - |
| AVI54_RS18145 () | 20280..20462 | - | 183 | WP_036771335.1 | hypothetical protein | - |
| AVI54_RS18150 () | 20505..21479 | - | 975 | WP_036771332.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI54_RS18155 () | 21573..21902 | - | 330 | Protein_32 | hypothetical protein | - |
| AVI54_RS19860 () | 22047..22199 | - | 153 | WP_146619546.1 | phosphatase | - |
| AVI54_RS18160 () | 22196..22492 | - | 297 | Protein_34 | hypothetical protein | - |
| AVI54_RS18165 () | 22578..23552 | + | 975 | WP_036771330.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI54_RS19865 () | 23572..23733 | - | 162 | WP_155046645.1 | hypothetical protein | - |
| AVI54_RS18170 () | 23733..24386 | - | 654 | WP_027242941.1 | DUF4376 domain-containing protein | - |
| AVI54_RS18175 () | 24398..24775 | - | 378 | WP_048876242.1 | hypothetical protein | - |
| AVI54_RS18180 () | 25260..26234 | + | 975 | WP_036773116.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI54_RS18185 () | 26254..26931 | - | 678 | WP_027242942.1 | hypothetical protein | - |
| AVI54_RS18190 () | 26931..27986 | - | 1056 | WP_062365785.1 | hypothetical protein | - |
| AVI54_RS18195 () | 28131..30107 | - | 1977 | WP_048876241.1 | host specificity protein J | - |
| AVI54_RS18200 () | 30378..30794 | - | 417 | WP_027242943.1 | hypothetical protein | - |
| AVI54_RS18205 () | 30791..31348 | - | 558 | WP_027242944.1 | tail assembly protein | - |
| AVI54_RS18210 () | 31694..32209 | + | 516 | WP_027242945.1 | hypothetical protein | - |
| AVI54_RS18215 () | 32231..32839 | - | 609 | Protein_46 | C40 family peptidase | - |
| AVI54_RS18220 () | 33013..33258 | - | 246 | WP_171824220.1 | phage head-tail connector protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|