MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 36245 bp
Accession: NZ_CP013776 Location: 1..36245 Organism: Piscirickettsia salmonis strain PM37984A Replicon: plasmid p3PS4
Accession: NZ_CP013776 Location: 1..36245 Organism: Piscirickettsia salmonis strain PM37984A Replicon: plasmid p3PS4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI51_RS18770 () | 395..661 | + | 267 | WP_196771702.1 | IS91 family transposase ISVsa9 | Transposase |
| AVI51_RS18775 () | 601..948 | + | 348 | WP_196771705.1 | transposase | - |
| AVI51_RS18780 () | 1490..1684 | - | 195 | WP_196771704.1 | toxin-antitoxin system HicB family antitoxin | - |
| AVI51_RS16790 () | 2342..3315 | + | 974 | Protein_4 | IS30 family transposase IS4351 | Transposase |
| AVI51_RS16795 () | 3492..4451 | - | 960 | WP_155764104.1 | MFS transporter | - |
| AVI51_RS18785 () | 4415..4723 | - | 309 | WP_081377376.1 | hypothetical protein | - |
| AVI51_RS16800 () | 4836..5861 | - | 1026 | WP_032126388.1 | helix-turn-helix domain-containing protein | - |
| AVI51_RS16805 () | 6622..7644 | + | 1023 | WP_016211377.1 | AAA family ATPase | - |
| AVI51_RS16810 () | 7668..8537 | + | 870 | WP_016211383.1 | hypothetical protein | - |
| AVI51_RS16815 () | 8843..9106 | + | 264 | WP_032126138.1 | RNA-binding protein | - |
| AVI51_RS16820 () | 9413..10384 | - | 972 | WP_033923677.1 | IS91 family transposase ISVsa9 | Transposase |
| AVI51_RS17720 () | 10309..10548 | - | 240 | WP_075275277.1 | IS91 family transposase ISVsa9 | Transposase |
| AVI51_RS16830 () | 10720..11607 | - | 888 | Protein_13 | phage tail tape measure protein | - |
| AVI51_RS16835 () | 11611..11877 | - | 267 | WP_016211142.1 | DUF4035 domain-containing protein | - |
| AVI51_RS16840 () | 11934..12257 | - | 324 | WP_075274761.1 | hypothetical protein | - |
| AVI51_RS16845 () | 12259..12483 | - | 225 | Protein_16 | hypothetical protein | - |
| AVI51_RS16850 () | 12772..12969 | - | 198 | Protein_17 | hypothetical protein | - |
| AVI51_RS16855 () | 12969..13319 | - | 351 | WP_075274762.1 | DUF3168 domain-containing protein | - |
| AVI51_RS16860 () | 13316..13711 | - | 396 | WP_075274763.1 | HK97 gp10 family phage protein | - |
| AVI51_RS16865 () | 13704..14027 | - | 324 | WP_075274764.1 | phage head closure protein | - |
| AVI51_RS16870 () | 14024..14335 | - | 312 | WP_075274765.1 | head-tail connector protein | - |
| AVI51_RS18790 () | 14332..14487 | - | 156 | WP_168183246.1 | hypothetical protein | - |
| AVI51_RS16875 () | 14673..15236 | + | 564 | WP_155064811.1 | hypothetical protein | - |
| AVI51_RS16880 () | 15272..16465 | - | 1194 | WP_054300591.1 | phage major capsid protein | - |
| AVI51_RS16885 () | 16520..17176 | - | 657 | WP_054300592.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| AVI51_RS16890 () | 17139..18380 | - | 1242 | WP_054300593.1 | phage portal protein | - |
| AVI51_RS16895 () | 18452..19513 | + | 1062 | WP_054300392.1 | IS701 family transposase ISAeme11 | Transposase |
| AVI51_RS16900 () | 19532..21214 | - | 1683 | WP_081377377.1 | terminase large subunit | - |
| AVI51_RS16905 () | 21218..21697 | - | 480 | WP_016212234.1 | P27 family phage terminase small subunit | - |
| AVI51_RS16910 () | 21785..22168 | - | 384 | WP_032126134.1 | HNH endonuclease | - |
| AVI51_RS16915 () | 22487..22852 | - | 366 | WP_016212235.1 | hypothetical protein | - |
| AVI51_RS18430 () | 22899..23078 | + | 180 | WP_155046773.1 | phosphatase | - |
| AVI51_RS18435 () | 23223..23405 | + | 183 | WP_155047026.1 | hypothetical protein | - |
| AVI51_RS16925 () | 23623..23916 | - | 294 | WP_016210977.1 | zinc ribbon domain-containing protein | - |
| AVI51_RS16930 () | 24095..24775 | - | 681 | WP_129556725.1 | DNA/RNA non-specific endonuclease | - |
| AVI51_RS16935 () | 24892..25299 | - | 408 | WP_016210974.1 | DUF4411 family protein | Toxin Detail |
| AVI51_RS16940 () | 25308..25535 | - | 228 | WP_016210972.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AVI51_RS16945 () | 25672..26646 | - | 975 | WP_054300271.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI51_RS16950 () | 26872..27963 | - | 1092 | WP_075274766.1 | hypothetical protein | - |
| AVI51_RS16955 () | 28494..28958 | - | 465 | WP_016212274.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| AVI51_RS16960 () | 28969..29163 | - | 195 | WP_032126154.1 | type II toxin-antitoxin system HicA family toxin | - |
| AVI51_RS16965 () | 29379..29969 | + | 591 | WP_032126152.1 | site-specific integrase | - |
| AVI51_RS16970 () | 30033..30374 | + | 342 | WP_081007075.1 | MBL fold metallo-hydrolase | - |
| AVI51_RS16975 () | 30720..31721 | - | 1002 | WP_054300579.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI51_RS16980 () | 32093..34123 | + | 2031 | WP_168183247.1 | S9 family peptidase | - |
| AVI51_RS16985 () | 34153..34881 | + | 729 | WP_017375910.1 | IS6 family transposase ISPsa2 | Transposase |
| AVI51_RS16990 () | 35023..35955 | + | 933 | WP_144420837.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|