MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 36063 bp
Accession: NZ_CP013771 Location: 1..36063 Organism: Piscirickettsia salmonis strain PM23019A Replicon: plasmid p3PS3
Accession: NZ_CP013771 Location: 1..36063 Organism: Piscirickettsia salmonis strain PM23019A Replicon: plasmid p3PS3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI50_RS16965 () | 175..603 | + | 429 | WP_054300691.1 | hypothetical protein | - |
| AVI50_RS16970 () | 777..1750 | + | 974 | Protein_2 | IS30 family transposase ISPlu1 | Transposase |
| AVI50_RS16975 () | 1956..2137 | - | 182 | Protein_3 | RNA recognition motif family protein | - |
| AVI50_RS16985 () | 3278..3811 | + | 534 | WP_075286012.1 | Cell division protein PomZ | VF |
| AVI50_RS16990 () | 3808..4185 | + | 378 | WP_075286014.1 | ParA family protein | - |
| AVI50_RS17000 () | 4778..4969 | + | 192 | WP_075286018.1 | hypothetical protein | - |
| AVI50_RS17005 () | 5347..5649 | + | 303 | WP_155764091.1 | hypothetical protein | - |
| AVI50_RS17010 () | 6012..6266 | + | 255 | WP_054300687.1 | DUF4160 domain-containing protein | - |
| AVI50_RS17015 () | 6309..6542 | + | 234 | WP_036781101.1 | hypothetical protein | - |
| AVI50_RS17020 () | 6589..7023 | + | 435 | WP_054300686.1 | hypothetical protein | - |
| AVI50_RS17025 () | 7285..7545 | + | 261 | WP_027242955.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| AVI50_RS17030 () | 7538..7891 | + | 354 | WP_054300685.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| AVI50_RS17035 () | 7995..8795 | + | 801 | WP_054300684.1 | methyltransferase domain-containing protein | - |
| AVI50_RS17040 () | 9022..10104 | + | 1083 | WP_054300162.1 | IS481 family transposase ISFw3 | Transposase |
| AVI50_RS17045 () | 10134..10787 | - | 654 | WP_155764092.1 | hypothetical protein | - |
| AVI50_RS17050 () | 10962..11933 | - | 972 | WP_033923677.1 | IS91 family transposase ISVsa9 | Transposase |
| AVI50_RS17995 () | 11858..12097 | - | 240 | WP_075275277.1 | transposase zinc-binding domain-containing protein | - |
| AVI50_RS17060 () | 12278..13519 | - | 1242 | WP_054300683.1 | MFS transporter | - |
| AVI50_RS18775 () | 13734..13877 | + | 144 | WP_155047030.1 | hypothetical protein | - |
| AVI50_RS17065 () | 13902..14333 | + | 432 | WP_016211069.1 | hypothetical protein | - |
| AVI50_RS17070 () | 14317..15102 | + | 786 | WP_032126922.1 | queuosine precursor transporter | - |
| AVI50_RS17075 () | 15110..15895 | - | 786 | WP_016211077.1 | Malonyl-[acyl-carrier protein] O-methyltransferase | VF |
| AVI50_RS17080 () | 16028..16771 | + | 744 | WP_016211067.1 | helix-turn-helix transcriptional regulator | - |
| AVI50_RS17085 () | 16981..17286 | + | 306 | WP_016211079.1 | hypothetical protein | - |
| AVI50_RS17090 () | 17441..17743 | + | 303 | WP_054300682.1 | hypothetical protein | - |
| AVI50_RS17095 () | 17782..18282 | + | 501 | WP_054300681.1 | hypothetical protein | Relaxase |
| AVI50_RS17100 () | 18279..18611 | - | 333 | Protein_27 | IS30 family transposase IS4351 | Transposase |
| AVI50_RS17115 () | 19532..20212 | - | 681 | WP_054300680.1 | IS30 family transposase ISPlu1 | Transposase |
| AVI50_RS17120 () | 20304..20537 | + | 234 | Protein_30 | phage major capsid protein | - |
| AVI50_RS17125 () | 20658..21992 | + | 1335 | WP_016211133.1 | hypothetical protein | - |
| AVI50_RS19230 () | 22031..22186 | + | 156 | WP_016211131.1 | hypothetical protein | - |
| AVI50_RS17130 () | 22183..22494 | + | 312 | WP_016211137.1 | head-tail connector protein | - |
| AVI50_RS17135 () | 22491..22814 | + | 324 | WP_016211132.1 | phage head closure protein | - |
| AVI50_RS17140 () | 22807..23202 | + | 396 | WP_016211139.1 | HK97 gp10 family phage protein | - |
| AVI50_RS17145 () | 23199..23549 | + | 351 | WP_016211129.1 | DUF3168 domain-containing protein | - |
| AVI50_RS17150 () | 23549..23971 | + | 423 | WP_016211141.1 | hypothetical protein | - |
| AVI50_RS17155 () | 23973..24302 | + | 330 | WP_075286022.1 | hypothetical protein | - |
| AVI50_RS17160 () | 24352..24618 | + | 267 | WP_016211142.1 | DUF4035 domain-containing protein | - |
| AVI50_RS17165 () | 24622..24840 | + | 219 | WP_054300678.1 | hypothetical protein | - |
| AVI50_RS17170 () | 25012..26988 | + | 1977 | Protein_41 | phage tail tape measure protein | - |
| AVI50_RS17175 () | 26981..27322 | + | 342 | WP_075274758.1 | phage tail protein | - |
| AVI50_RS17180 () | 27319..27990 | + | 672 | WP_016210666.1 | phage minor tail protein L | - |
| AVI50_RS17185 () | 27959..28705 | + | 747 | WP_032126911.1 | C40 family peptidase | - |
| AVI50_RS17190 () | 28695..29251 | + | 557 | Protein_45 | tail assembly protein | - |
| AVI50_RS17195 () | 29248..32535 | + | 3288 | WP_054300695.1 | host specificity protein J | - |
| AVI50_RS17200 () | 32535..33674 | + | 1140 | WP_054300694.1 | hypothetical protein | - |
| AVI50_RS17205 () | 33686..34102 | + | 417 | Protein_48 | hypothetical protein | - |
| AVI50_RS18005 () | 34273..34512 | + | 240 | WP_075275277.1 | transposase zinc-binding domain-containing protein | - |
| AVI50_RS17215 () | 34437..35408 | + | 972 | WP_033923677.1 | IS91 family transposase ISVsa9 | Transposase |
| AVI50_RS17220 () | 35563..35799 | + | 237 | Protein_51 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|