MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 36218 bp
Accession: NZ_CP013770 Location: 1..36218 Organism: Piscirickettsia salmonis strain PM23019A Replicon: plasmid p2PS3
Accession: NZ_CP013770 Location: 1..36218 Organism: Piscirickettsia salmonis strain PM23019A Replicon: plasmid p2PS3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI50_RS16725 () | 884..1081 | + | 198 | WP_075285999.1 | hypothetical protein | - |
| AVI50_RS16730 () | 2609..3205 | + | 597 | WP_075286000.1 | S9 family peptidase | - |
| AVI50_RS16735 () | 3253..3978 | + | 726 | Protein_3 | IS6 family transposase | - |
| AVI50_RS16740 () | 4120..5052 | + | 933 | WP_144420837.1 | hypothetical protein | - |
| AVI50_RS17980 () | 5242..5481 | + | 240 | WP_075275277.1 | transposase zinc-binding domain-containing protein | - |
| AVI50_RS19215 () | 5536..5877 | + | 342 | WP_196772362.1 | transposase | - |
| AVI50_RS19220 () | 5813..6376 | + | 564 | WP_196772363.1 | transposase | - |
| AVI50_RS16755 () | 6839..7192 | - | 354 | WP_036780061.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| AVI50_RS16760 () | 7185..7444 | - | 260 | Protein_9 | type II toxin-antitoxin system HicA family toxin | - |
| AVI50_RS16765 () | 7693..8667 | + | 975 | WP_054300271.1 | IS30 family transposase | - |
| AVI50_RS16770 () | 8844..9971 | - | 1128 | WP_155764090.1 | MFS transporter | - |
| AVI50_RS16775 () | 10188..11213 | - | 1026 | WP_032126388.1 | helix-turn-helix domain-containing protein | - |
| AVI50_RS16780 () | 11974..12996 | + | 1023 | WP_016211377.1 | AAA family ATPase | - |
| AVI50_RS16785 () | 13020..13382 | + | 363 | WP_075286001.1 | hypothetical protein | - |
| AVI50_RS16790 () | 13472..13888 | + | 417 | WP_075286003.1 | hypothetical protein | - |
| AVI50_RS16795 () | 14194..14457 | + | 264 | WP_032126138.1 | RNA-binding protein | - |
| AVI50_RS16800 () | 14764..15735 | - | 972 | WP_033923677.1 | IS91 family transposase | - |
| AVI50_RS17985 () | 15660..15899 | - | 240 | WP_075275277.1 | transposase zinc-binding domain-containing protein | - |
| AVI50_RS16810 () | 16071..16958 | - | 888 | Protein_19 | phage tail tape measure protein | - |
| AVI50_RS16815 () | 16962..17228 | - | 267 | WP_016211142.1 | DUF4035 domain-containing protein | - |
| AVI50_RS16820 () | 17285..17608 | - | 324 | WP_075274761.1 | hypothetical protein | - |
| AVI50_RS16825 () | 17610..17834 | - | 225 | Protein_22 | hypothetical protein | - |
| AVI50_RS16830 () | 18123..18320 | - | 198 | Protein_23 | hypothetical protein | - |
| AVI50_RS16835 () | 18320..18670 | - | 351 | WP_075274762.1 | DUF3168 domain-containing protein | - |
| AVI50_RS16840 () | 18667..19062 | - | 396 | WP_075274763.1 | HK97 gp10 family phage protein | - |
| AVI50_RS16845 () | 19055..19378 | - | 324 | WP_075274764.1 | phage head closure protein | - |
| AVI50_RS16850 () | 19375..19686 | - | 312 | WP_075274765.1 | head-tail connector protein | - |
| AVI50_RS19225 () | 19683..19838 | - | 156 | WP_168183246.1 | hypothetical protein | - |
| AVI50_RS16855 () | 20006..20587 | + | 582 | WP_036778347.1 | hypothetical protein | - |
| AVI50_RS16860 () | 20623..21816 | - | 1194 | WP_054300591.1 | phage major capsid protein | - |
| AVI50_RS16865 () | 21871..22527 | - | 657 | WP_054300592.1 | Clp protease ClpP | - |
| AVI50_RS16870 () | 22490..23641 | - | 1152 | WP_075286005.1 | phage portal protein | - |
| AVI50_RS16875 () | 23802..24863 | + | 1062 | WP_054300392.1 | transposase | - |
| AVI50_RS16880 () | 24882..26300 | - | 1419 | WP_196772361.1 | terminase large subunit | - |
| AVI50_RS16885 () | 26567..27046 | - | 480 | WP_016212234.1 | P27 family phage terminase small subunit | - |
| AVI50_RS18760 () | 27134..27516 | - | 383 | Protein_36 | HNH endonuclease | - |
| AVI50_RS16895 () | 27834..28151 | - | 318 | WP_129556723.1 | hypothetical protein | - |
| AVI50_RS18765 () | 28569..28751 | + | 183 | WP_155047026.1 | hypothetical protein | - |
| AVI50_RS16905 () | 28969..29262 | - | 294 | WP_016210977.1 | zinc ribbon domain-containing protein | - |
| AVI50_RS16910 () | 29441..30121 | - | 681 | WP_129556725.1 | DNA/RNA non-specific endonuclease | - |
| AVI50_RS16915 () | 30238..30645 | - | 408 | WP_016210974.1 | DUF4411 family protein | Toxin Detail |
| AVI50_RS16920 () | 30654..30881 | - | 228 | WP_016210972.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AVI50_RS16925 () | 31018..31992 | - | 975 | WP_054300271.1 | IS30 family transposase | - |
| AVI50_RS16930 () | 32218..32412 | - | 195 | WP_075286007.1 | hypothetical protein | - |
| AVI50_RS16935 () | 32451..33308 | - | 858 | WP_075286009.1 | hypothetical protein | - |
| AVI50_RS16940 () | 33839..34303 | - | 465 | WP_016212274.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| AVI50_RS16945 () | 34314..34508 | - | 195 | WP_032126154.1 | type II toxin-antitoxin system HicA family toxin | - |
| AVI50_RS16950 () | 34724..35314 | + | 591 | WP_032126152.1 | site-specific integrase | - |
| AVI50_RS16955 () | 35378..35719 | + | 342 | WP_081007075.1 | MBL fold metallo-hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|